/*----------------------------------------------------------------
%W% %G%
lws9287k.asc translated Tue Dec 17 10:29:54 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 14.4822 um length = 29.5748 um area = 1345.57 um2
16 three-D points; 21 outline points numbered 1-21
outline diameter = 20.7258 um
5 primary neurites
24 branches totaling 2113.47 um in length, 5238.73 um2 in area
511 tree points translated to 231 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 532
No. trees 6
Text NOT ASSIGNED
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[1],\
dend2[7],\
dend3[3],\
dend4[3],\
dend5[29]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
soma connect dend5[0] (0), 0.5
/* neurite geometry*/
for i = 0,0 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,6 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,2 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,2 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,28 {
dend5[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,0 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,6 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,2 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,2 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
for i = 1,28 {
dend5[fscan()] connect dend5[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
16
-19 1.5 2.5 0
-19 -1 2.25 5.0249
-16 -0.96429 2.0357 11.965
-15.5 0.8125 1.875 16.642
-12.5 -0.25 1.75 22.506
-10 -0.85714 1.75 22.72
-9 -0.875 1.75 23.255
-8 -0.75 1.5625 23.5
-5 -1.65 1 21.723
-3 -1.6786 1.4286 19.358
-2 -2.6429 1.6429 16.288
-1.5 -3.5 1.5 14.036
-1.5 -4.75 0.75 11.769
-1 -3.75 0.875 8.7928
-0.5 -2.75 1.25 6.0415
-0.5 0 0 0
NEURITE COORDINATES AND DIAMETERS:
10 25
-5 1 -4.5 1.7
-1 0.5 -4.5 1.3
1.5 0 -4.5 1.1
4.5 -1 -3.5 0.9
7.5 -1 -3.5 0.9
8 0 -1.5 0.7
9.5 4 -2 0.7
9.5 7.5 -1 0.5
9 10 -1.5 0.5
11 11.5 -2.5 0.4
14.5 13.5 -2 0.3
17.5 18 -2.5 0.2
22.5 20.5 -2.5 0.2
23.5 24.5 -3 0.2
26 27 -3 0.2
29.5 29 -3 0.2
31.5 31.5 -3 0.2
35 34.5 -3 0.2
38.5 36 -4 0.2
43 36.5 -4.5 0.2
45 40 -4.5 0.2
48.5 42.5 -4.5 0.2
51 46 -4.5 0.2
53.5 50.5 -5 0.2
52.5 55.5 -4.5 0.2
2 7
-6.5 4 4.5 2.5
-3.5 5 5 1.7
-2.5 5 6.5 1.6
-0.5 5 7 1.4
-0.5 3.5 9 1.4
2 2.5 12.5 1.4
6.5 1 13.5 2.4
3 8
6.5 1 13.5 2.4
9 1.5 12.5 1.4
14 2 13 1.4
17 3.5 13 1.2
18.5 7 13.5 1.2
21.5 11.5 13 1.2
21 15.5 13 1.2
23 18 13.5 1.2
1 3
23 18 13.5 1.2
21.5 22 13 0.6
22.5 25.5 13.5 0.6
1 4
22.5 25.5 13.5 0.6
19 27.5 13.5 0.4
17.5 29.5 13.5 0.4
15.5 30 12.5 0.2
2 5
22.5 25.5 13.5 0.6
25.5 28 14.5 0.4
25 32 12.5 0.4
25.5 34 11.5 0.4
24 36.5 11.5 0.4
2 6
23 18 13.5 1.2
24.5 18.5 13.5 0.4
27 20 13.5 0.4
29.5 21.5 13.5 0.4
32.5 23.5 13.5 0.4
34.5 26 13 0.4
5 10
6.5 1 13.5 2.4
3 -2.5 14 1.2
0.5 -5 14.5 1.2
-3.5 -9 14.5 0.9
-5.5 -14 14 0.9
-9 -20.5 14 0.9
-14 -25.5 15.5 0.5
-17 -28 15.5 0.5
-18 -32 15.5 0.5
-15.5 -35 14 0.3
2 6
-14.5 8 3 1.8
-14.5 10.5 3 0.5
-14.5 13 3 0.5
-14.5 16 4 0.5
-15 19 4.5 0.5
-16 22 4.5 0.4
1 3
-16 22 4.5 0.4
-19.5 22.5 4.5 0.4
-19.5 22 4.5 0.4
2 5
-16 22 4.5 0.4
-16 25 4.5 0.3
-16.5 28 4.5 0.3
-19 32 5 0.3
-19 33 5 0.3
2 8
-15.5 5.5 3.5 1.6
-17 7.5 5.5 1.1
-19.5 8 5.5 1.1
-21 6.5 4.5 1.1
-21.5 4 6.5 1.1
-21.5 2 7 1.1
-20.5 0 7.5 1.1
-21 -1 9 1.1
14 29
-21 -1 9 1.1
-18.5 -2.5 9 0.4
-15.5 -6 10.5 0.4
-14 -8.5 10.5 0.4
-12 -11.5 10.5 0.4
-11 -15 10.5 0.4
-10.5 -19 8 0.4
-9 -22.5 8 0.4
-8 -25.5 8 0.4
-5 -28 7 0.4
-2.5 -33 9.5 0.4
-1.5 -37 11 0.4
-0.5 -38.5 11.5 0.4
4.5 -41.5 13 0.4
5 -44.5 11.5 0.4
9 -48.5 12 0.4
10.5 -52.5 13.5 0.4
11.5 -56.5 13 0.4
13 -60.5 13 0.4
13.5 -64.5 12.5 0.4
20 -72.5 14 0.4
24 -75.5 14.5 0.2
26 -77.5 14.5 0.2
31.5 -81 14.5 0.2
35 -85 15 0.2
37 -90.5 14 0.2
40 -97 15 0.2
45 -101 14 0.2
48.5 -104.5 13.5 0.2
7 18
-21 -1 9 1.1
-21.5 -1.5 8.5 0.4
-24.5 -2 8.5 0.4
-26.5 -3.5 9 0.4
-28.5 -5.5 9 0.4
-30.5 -6.5 10.5 0.4
-33.5 -6.5 10 0.4
-34.5 -9 13 0.4
-37 -10 12 0.4
-39 -7 14 0.4
-42.5 -8.5 13 0.4
-47.5 -8.5 13 0.4
-50.5 -6.5 12.5 0.4
-53.5 -9.5 12.5 0.4
-56 -13.5 12.5 0.2
-57.5 -17.5 12.5 0.2
-67.5 -21 12.5 0.2
-72 -24 12 0.2
5 12
-7.5 -14 4 8.7
-8 -18.5 5 8.2
-10 -24.5 6 7.4
-8.5 -27.5 7 7.4
-12 -30.5 7.5 6.5
-17 -33 9 6
-20 -34 9.5 6
-23 -34.5 12 5.9
-28 -36 11.5 5
-30 -36.5 14 5.5
-31 -38.5 14.5 6.3
-34.5 -41.5 14.5 6.7
1 3
-34.5 -41.5 14.5 6.7
-34.5 -44.5 14 3.8
-35 -46.5 14 3.8
1 3
-35 -46.5 14 3.8
-33.5 -49 15 2.5
-32.5 -51 13 2.5
1 4
-32.5 -51 13 2.5
-29.5 -53 14 2.5
-27.5 -55 14.5 2.5
-27 -56 12 2.5
6 12
-27 -56 12 2.5
-23 -57 13 1
-20 -56.5 13 0.7
-17.5 -56.5 13 0.7
-14.5 -59 13.5 0.7
-9.5 -60.5 13.5 0.7
-6.5 -63.5 13.5 0.4
1.5 -67.5 13 0.3
4 -70.5 13 0.3
7 -72 13.5 0.3
13.5 -73.5 12.5 0.3
21 -79 13 0.3
4 10
-27 -56 12 2.5
-30 -58.5 14 1.9
-28 -61.5 13.5 1.9
-26.5 -64.5 14 1.9
-25.5 -67 13.5 1.7
-26 -71.5 14.5 1.7
-26 -76.5 11.5 1.7
-25.5 -80 13 1.7
-27 -82 12.5 1.7
-26.5 -87 11.5 1.7
5 14
-26.5 -87 11.5 1.7
-25.5 -90 11.5 1.3
-25 -93.5 12.5 1.3
-22.5 -98.5 10 1.3
-21.5 -102 8 1.3
-21 -106 8 1.3
-18.5 -110 6 1.3
-17 -112.5 6 1.3
-16 -114 6 1.3
-16 -116.5 5.5 1.3
-15 -119 5.5 1.3
-13 -122.5 5.5 1.3
-13 -125.5 5.5 1.3
-15 -128.5 4 1.3
2 4
-15 -128.5 4 1.3
-11 -131.5 4 1.3
-9.5 -135 4 1.3
-8 -139 4 1.3
8 17
-8 -139 4 1.3
-6.5 -141.5 3.5 0.5
-2 -144.5 3.5 0.5
1 -149 3.5 0.5
5 -153 3.5 0.5
9 -158.5 3.5 0.5
10.5 -163 5 0.5
14 -167 5 0.3
16 -171.5 5 0.3
21 -180.5 4 0.3
24 -183 4 0.3
27.5 -184.5 6.5 0.3
31 -182 6.5 0.3
31 -185 6.5 0.3
34 -186.5 6.5 0.3
36 -184.5 6.5 0.3
40.5 -184.5 7 0.3
15 24
-8 -139 4 1.3
-6 -143.5 3 0.5
-4.5 -150.5 3.5 0.5
-4 -156.5 3.5 0.5
-3.5 -160 1.5 0.5
-3.5 -166.5 0.5 0.5
-3 -174 1 0.5
-3.5 -180 1 0.5
-3.5 -185.5 1.5 0.5
-1.5 -192 1.5 0.5
1.5 -197 2 0.5
4 -203 2 0.5
6.5 -209.5 2.5 0.5
9 -214 2.5 0.5
9 -221.5 2.5 0.5
9.5 -226.5 2.5 0.5
11.5 -230.5 2.5 0.3
12.5 -236.5 2.5 0.3
11.5 -244 2.5 0.3
11.5 -249.5 2.5 0.3
12.5 -256 3 0.3
14.5 -266.5 3 0.3
19.5 -270 2.5 0.3
20.5 -275 2.5 0.3
15 25
-15 -128.5 4 1.3
-15 -131.5 5 0.4
-15.5 -135.5 5 0.4
-14.5 -139.5 5 0.4
-14 -144 5 0.3
-12.5 -149.5 3.5 0.3
-11.5 -154.5 2 0.3
-13 -162 2 0.3
-12.5 -167.5 2 0.3
-10.5 -175.5 2 0.3
-14.5 -180 2 0.3
-16 -184 2 0.3
-18.5 -189.5 1 0.3
-22 -194.5 1 0.3
-26.5 -200 1 0.3
-31.5 -205 1 0.3
-32.5 -210 1 0.3
-36.5 -214.5 1 0.3
-39.5 -219.5 0.5 0.3
-43 -225 2 0.3
-45.5 -232.5 1.5 0.3
-43.5 -240.5 2.5 0.3
-43 -246 1.5 0.3
-40 -259 4 0.3
-41 -264 3 0.3
5 12
-26.5 -87 11.5 1.7
-29.5 -90 11.5 0.3
-32 -93 11.5 0.3
-33.5 -96 12 0.3
-33.5 -100 10 0.3
-35 -101.5 10 0.3
-33.5 -104 10 0.3
-33.5 -106.5 12.5 0.3
-33.5 -110 10.5 0.3
-33.5 -112.5 10.5 0.3
-36.5 -117.5 7 0.3
-36 -121.5 6.5 0.3
7 16
-32.5 -51 13 2.5
-33 -54 14 0.3
-32 -58.5 12 0.3
-32 -62 12.5 0.3
-31 -67 12.5 0.3
-30.5 -70.5 12.5 0.3
-32.5 -73.5 12.5 0.3
-35.5 -78.5 12.5 0.3
-35.5 -83 12.5 0.3
-32.5 -85.5 11.5 0.3
-37 -88 11 0.3
-38.5 -91 10.5 0.3
-41.5 -92.5 9 0.3
-41.5 -95 10.5 0.3
-46 -98.5 10 0.3
-47 -99 9.5 0.3
2 6
-35 -46.5 14 3.8
-35.5 -49 14 1.2
-38.5 -49.5 14 1.2
-42 -51 15 1.2
-44 -52.5 14.5 1.2
-44 -54.5 14 1.2
3 7
-44 -54.5 14 1.2
-42 -56.5 14 1.1
-43.5 -60 13 1.1
-45 -63.5 15 1.1
-46 -67 15 1.1
-48 -70.5 15 1.1
-49.5 -76 15 1.1
7 16
-49.5 -76 15 1.1
-48.5 -79 14.5 1
-48.5 -85 14.5 1
-49.5 -88.5 14.5 1
-46 -92.5 13.5 0.5
-46 -95 13.5 0.5
-45.5 -100.5 13.5 0.5
-45.5 -103.5 12 0.5
-45 -107 11 0.4
-44 -111 11 0.4
-39.5 -114.5 10.5 0.3
-40.5 -119 10 0.3
-40.5 -124.5 9.5 0.3
-40 -129 9.5 0.3
-38 -132 9 0.3
-38 -132 9 0.3
4 11
-49.5 -76 15 1.1
-52.5 -77 14.5 0.3
-55 -78.5 14.5 0.3
-57.5 -79.5 17 0.3
-60 -82.5 17 0.3
-60.5 -85 17 0.3
-63.5 -86.5 17 0.3
-66 -90.5 16.5 0.3
-68 -91.5 16.5 0.3
-75 -92 17 0.3
-79 -92 17 0.3
5 16
-44 -54.5 14 1.2
-46.5 -56.5 14 0.3
-51.5 -57.5 13.5 0.3
-53 -59 13.5 0.3
-54.5 -60 13.5 0.3
-56 -61.5 13.5 0.3
-58 -63.5 13.5 0.3
-59.5 -65.5 13.5 0.3
-63 -67.5 13.5 0.3
-65.5 -67.5 13.5 0.3
-67.5 -70 13.5 0.3
-71 -72.5 14.5 0.3
-75 -70 14.5 0.3
-79 -72.5 14.5 0.3
-82.5 -72.5 14.5 0.3
-85 -72.5 14.5 0.3
3 8
-34.5 -41.5 14.5 6.7
-37 -41.5 14.5 3
-40.5 -41.5 14.5 3
-43 -44.5 14.5 3
-46 -45 14.5 3
-49.5 -45 13 3
-52.5 -48 13 3
-54.5 -48.5 13 3
3 7
-54.5 -48.5 13 3
-56.5 -52 15 2.6
-56.5 -55 15.5 2.2
-58 -57.5 15.5 2.2
-60.5 -60.5 15 2.2
-62 -63.5 16 2.2
-62 -66 15 2.2
1 3
-62 -66 15 2.2
-61.5 -69 14 2.2
-61.5 -70.5 15 2.2
10 18
-61.5 -70.5 15 2.2
-58 -73 17 0.5
-55.5 -76 16 0.5
-53 -81 16.5 0.5
-54 -85.5 16.5 0.5
-54 -93 16.5 0.5
-55.5 -97.5 17.5 0.5
-55 -104.5 17.5 0.5
-54 -111.5 16 0.5
-54.5 -117.5 13.5 0.5
-55.5 -122.5 14 0.5
-57.5 -128.5 11 0.5
-57 -133.5 9.5 0.5
-54 -135 9 0.5
-52 -139 12.5 0.5
-50 -146 9.5 0.3
-47 -151 8.5 0.3
-47 -154 8.5 0.3
1 4
-61.5 -70.5 15 2.2
-62 -73 14.5 1.7
-63.5 -76 14.5 1.7
-62.5 -78 15 1.7
18 42
-62.5 -78 15 1.7
-62.5 -82.5 14.5 1.4
-62.5 -87 14.5 1.4
-64 -89.5 14.5 1.4
-64.5 -94.5 15.5 1.4
-64.5 -98 15.5 1.4
-68.5 -101 15.5 1.4
-68.5 -106 16.5 1.4
-67.5 -108 16 1
-70 -111.5 18 1
-69 -115 17.5 1
-71.5 -120 18.5 1
-72.5 -122.5 20 0.9
-75.5 -128.5 19 1
-78 -133.5 19 1
-80.5 -140.5 20 0.5
-84 -146 21 0.5
-87 -148 23.5 0.5
-87.5 -151 23.5 0.5
-88 -153 23.5 0.5
-89 -154 23 0.5
-91 -159 21 0.5
-92 -162 21.5 0.5
-94 -165 21 0.5
-96 -170 22.5 0.5
-96 -175.5 26 0.3
-99 -178 23.5 0.3
-102 -179.5 27.5 0.3
-103.5 -182 27 0.3
-103 -185 27 0.3
-108 -187.5 28 0.3
-108 -190 26 0.3
-109.5 -192.5 26.5 0.3
-111 -198 25.5 0.3
-117 -200.5 25.5 0.3
-117 -205.5 25.5 0.3
-118.5 -207 25.5 0.3
-120 -212.5 24.5 0.3
-122 -215.5 25 0.3
-122.5 -220.5 25.5 0.3
-125 -222.5 26 0.3
-125.5 -225 25 0.3
10 24
-62.5 -78 15 1.7
-66 -79.5 17 0.5
-69 -80 16 0.5
-71 -81 16 0.5
-77.5 -85 16.5 0.3
-78 -87.5 16.5 0.3
-82 -87.5 16.5 0.3
-84 -89 17 0.3
-86 -91 16 0.3
-88.5 -92.5 16 0.3
-92 -92.5 16 0.3
-95.5 -94.5 16 0.3
-99.5 -92.5 16 0.3
-108.5 -97 16 0.3
-111.5 -100 16 0.3
-111.5 -102.5 16 0.3
-112 -105 16 0.3
-115.5 -106.5 16 0.3
-118 -109 16 0.3
-120.5 -110 16 0.3
-122 -112 16.5 0.3
-124.5 -109.5 12.5 0.3
-127.5 -107.5 12 0.3
-130.5 -107.5 17.5 0.3
17 47
-62 -66 15 2.2
-62 -66 16.5 1
-65 -69 18.5 1
-67 -70 18.5 1
-68.5 -73 17 1
-72.5 -73 18 1
-75.5 -76.5 20.5 1
-80 -78 20 1
-82.5 -77.5 20 1
-84 -80 21 1
-85.5 -81.5 20.5 1
-86.5 -81 19.5 1
-89 -81 19.5 1
-93.5 -80 20.5 1
-92.5 -82.5 20.5 1
-96.5 -83 22.5 1
-104.5 -85.5 21.5 0.9
-106.5 -85 21.5 0.9
-111.5 -88 22 0.9
-112.5 -90 22 0.9
-116 -90.5 22 0.9
-121 -91.5 20 0.9
-125.5 -91.5 20 0.9
-127 -91.5 21 0.9
-130.5 -90.5 17.5 0.6
-135.5 -91.5 17.5 0.6
-136 -93.5 17.5 0.6
-140 -94.5 17.5 0.6
-140 -97 17.5 0.6
-144 -100.5 16.5 0.6
-145.5 -99.5 16.5 0.6
-150.5 -103 18 0.6
-153 -102.5 19 0.6
-157 -105.5 18.5 0.6
-159.5 -106 18.5 0.4
-160.5 -104 19.5 0.3
-163 -105.5 19.5 0.3
-167.5 -105.5 18 0.3
-170.5 -106 18 0.3
-170 -109.5 18 0.3
-173.5 -106.5 18 0.3
-176.5 -104 18.5 0.3
-179.5 -104.5 18.5 0.3
-181.5 -104.5 19 0.3
-185 -105.5 18.5 0.3
-187 -102.5 18.5 0.3
-189 -105 17.5 0.3
2 7
-54.5 -48.5 13 3
-55.5 -47 15 0.5
-59 -48 15 0.5
-62.5 -47 16.5 0.5
-65 -46 15.5 0.9
-67 -45 16.5 0.9
-69.5 -43 17 0.9
7 23
-69.5 -43 17 0.9
-71 -44.5 16.5 0.6
-73.5 -47 16 0.6
-75.5 -47.5 16 0.6
-79.5 -48 16.5 0.6
-81 -49.5 16 0.6
-84 -49.5 17 0.6
-85 -51.5 16.5 0.6
-90 -55 17 0.4
-92 -58 17 0.4
-94.5 -59 17 0.4
-96.5 -61.5 17 0.3
-100 -60.5 17.5 0.3
-102 -61 17.5 0.3
-103 -63 17 0.3
-105.5 -63.5 17 0.3
-108.5 -63 17 0.3
-112 -64.5 17 0.3
-114 -67 16 0.3
-115.5 -68 16.5 0.3
-117 -69.5 16.5 0.3
-124 -72 14.5 0.3
-125.5 -72 14.5 0.3
8 17
-69.5 -43 17 0.9
-70 -40.5 16 0.5
-68 -36.5 16 0.5
-69.5 -32.5 15.5 0.5
-69 -27 13 0.5
-66.5 -20.5 13 0.5
-66.5 -13.5 13 0.5
-66.5 -9.5 13 0.5
-66 -5.5 13 0.4
-72 -3 14 0.4
-72.5 -2 11 0.4
-72.5 0.5 12 0.4
-72 5 12 0.4
-72 8.5 12 0.4
-72 14.5 11.5 0.4
-72.5 17.5 12 0.4
-75 20 12.5 0.4
CONNECTIONS:
0 1
1 1
2 1
2 1
1 1
0 1
0 1
0 1
0 1
0 1
0 1
1 1
2 1
3 1
3 1
5 1
6 1
7 1
7 1
6 1
5 1
2 1
1 1
13 1
14 1
14 1
13 1
0 1
18 1
19 1
20 1
20 1
22 1
22 1
19 1
18 1
26 1
26 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}