/*---------------------------------------------------------------- %W% %G% lws9287n.asc translated Tue Dec 17 10:29:56 1996 by ntscable 2.0 source file syntax: Eutectic output file syntax: CABLE soma: diameter = 14.2764 um length = 25.6015 um area = 1148.24 um2 21 three-D points; 23 outline points numbered 1-23 outline diameter = 20.248 um 2 primary neurites 30 branches totaling 2879.2 um in length, 3722.4 um2 in area 997 tree points translated to 319 segments (1 requested) Neurites divided into segments of equal dx between adjacent digitized branch points. Segment length constrained to be < 10 um. No. points 1020 No. trees 3 Text NOT ASSIGNED ----------------------------------------------------------------*/ /* create sections */ create soma,\ dend1[1],\ dend2[57] /*----------------------------------------------------------------*/ proc geometry() { local i, j /* soma geometry */ soma { nseg = 1 pt3dclear() for j = 1, fscan() { pt3dadd(fscan(),fscan(),fscan(),fscan()) } } /* connect primary neurites */ soma connect dend1[0] (0), 0.5 soma connect dend2[0] (0), 0.5 /* neurite geometry*/ for i = 0,0 { dend1[i] { nseg = fscan() pt3dclear() for j = 1, fscan() { pt3dadd(fscan(),fscan(),fscan(),fscan()) } } } for i = 0,56 { dend2[i] { nseg = fscan() pt3dclear() for j = 1, fscan() { pt3dadd(fscan(),fscan(),fscan(),fscan()) } } } /* branching topology*/ for i = 1,0 { dend1[fscan()] connect dend1[i] (0), fscan() } for i = 1,56 { dend2[fscan()] connect dend2[i] (0), fscan() } } geometry() SOMA COORDINATES AND DIAMETERS: 21 -0.5 8 0.5 0 -0.5 6.75 0.5 2.5 -0.5 5 0.25 6.0208 1 4.75 0.25 10.512 1 4.375 0.3125 11.256 2 4.625 0.4375 14.751 2.5 4.5 0.625 16.002 4 4.5 1 19.026 4.5 4.4375 1 19.9 6 4.25 1 22.522 8.5 4.25 1.1562 22.511 10 4.4375 1.25 22.88 10.5 4.5714 1.2143 22.864 11.5 3.9643 0.89286 21.073 13.5 3.65 1.55 19.414 14 3.75 1.75 18.668 15.5 3 1.5 14.142 16 2.85 1.5 12.857 17.5 2.9 2.25 7.816 17.5 4.65 2.25 4.329 18 6 2.5 0 NEURITE COORDINATES AND DIAMETERS: 11 33 13.5 -3.5 -0.5 0.4 18 -3 -0.5 0.4 21 -5 -1 0.4 23 -6 0 0.4 24.5 -7 0 0.3 26.5 -8 0 0.3 29.5 -9 0 0.3 32.5 -8.5 0 0.3 34.5 -7.5 0 0.3 37 -8.5 0 0.3 39.5 -11.5 -0.5 0.3 39.5 -15.5 -0.5 0.3 38 -17.5 -1 0.3 37.5 -19.5 -1 0.3 39 -22 -0.5 0.3 39 -24.5 -2 0.3 39.5 -27 -2 0.2 41 -30.5 -2 0.2 41 -34 -2 0.2 41.5 -38 -2 0.2 43 -41 -1 0.2 44 -43.5 -1 0.2 42.5 -46.5 -1 0.2 44.5 -47.5 -1 0.2 47.5 -49.5 -1 0.2 49 -53.5 -1 0.2 49 -57.5 -1.5 0.2 50 -61 -1.5 0.2 47.5 -64.5 -1 0.2 49.5 -68.5 -1 0.2 47.5 -71.5 -1 0.2 47.5 -74.5 -1 0.2 49 -75.5 -1 0.2 3 8 9 14.5 2.5 3.4 9 17 4 3.2 8.5 20.5 3.5 3.2 7.5 22 3.5 3.2 7 24.5 4 3.2 5.5 27 3 2.9 5.5 30 4.5 2.5 4.5 32.5 4.5 3.4 18 70 4.5 32.5 4.5 3.4 1.5 33 5.5 0.6 -0.5 33.5 7 0.7 -3.5 35 5.5 0.7 -4.5 36 6 0.6 -5.5 38 7.5 0.6 -8 39.5 7.5 0.6 -9.5 41.5 7.5 0.6 -9.5 44.5 8 0.6 -10.5 45.5 7 0.6 -12.5 46 7 0.6 -12.5 48 8 1.1 -14 50 8 0.6 -14 52 8.5 0.6 -14 55 8.5 0.6 -14.5 58 9 0.6 -14.5 60.5 9 0.6 -14 62 8.5 0.6 -13 63.5 8.5 0.6 -14 65.5 8.5 0.6 -15 68.5 8.5 0.5 -16.5 70.5 8.5 1.1 -15.5 73.5 8.5 0.5 -16.5 75 9 0.5 -18 75.5 10 0.5 -19 77 10 0.5 -19 79.5 10.5 0.5 -20.5 80.5 10.5 0.5 -22 82 10.5 0.5 -22.5 83.5 11 0.5 -22.5 86 11.5 0.6 -24 88.5 12 0.6 -22.5 90 12.5 0.6 -22 92.5 12.5 0.6 -24.5 94 12.5 0.7 -27 96.5 13 0.7 -27 99.5 13 0.7 -24.5 99 12.5 0.7 -24 101 12.5 0.7 -25 103.5 13 0.7 -24 105.5 12.5 0.8 -22 109 12 0.8 -21 111.5 12 0.8 -20 114.5 12 0.8 -18.5 116.5 12 0.8 -16.5 119.5 12.5 0.8 -14 121 13.5 0.8 -12 124 13.5 0.8 -9.5 125.5 14 0.7 -8 129 14 0.7 -5 130.5 14 0.7 -5.5 132.5 14 0.7 -3.5 133 14 0.7 -2 134.5 14 0.7 -1.5 136 13.5 0.7 -0.5 138.5 13.5 0.7 1.5 139.5 13.5 0.7 2 142 14.5 0.7 0.5 143 14.5 0.7 -1 145 14.5 0.7 1 148 14.5 0.7 0 149.5 13.5 0.7 0 151.5 13 0.7 0 153.5 12 0.7 1 155.5 11.5 0.7 2.5 156.5 11.5 0.7 2 158.5 11 0.7 3.5 160 10 0.7 7 160 10 0.7 8.5 160 9 0.7 6 25 8.5 160 9 0.7 10 162.5 9 0.4 11 164.5 9 0.4 12 166.5 9 0.4 12.5 168.5 9 0.4 11.5 170.5 9 0.4 13 172 9 0.4 15 173.5 9.5 0.4 14.5 175.5 10 0.3 15 178 9.5 0.3 16 180.5 10 0.3 15 182 10 0.3 13.5 183.5 10.5 0.3 15.5 184.5 9.5 0.3 14.5 186.5 10.5 0.3 14 188 11 0.3 14.5 190.5 11 0.3 12.5 190.5 11.5 0.3 11 191.5 11 0.3 12 193 11 0.3 10 194 11 0.3 8 194.5 11 0.3 6 196 11 0.3 5.5 198 11 0.3 5 200 10.5 0.3 1 2 5 200 10.5 0.3 4 201.5 11.5 0.3 1 3 5 200 10.5 0.3 7 200.5 9.5 0.3 7.5 201 10 1.4 5 17 7.5 201 10 1.4 6.5 203.5 10 0.2 7.5 206 10 0.2 9 208.5 9.5 0.2 10.5 210.5 9.5 0.2 12 213.5 9 0.2 14 215.5 9 0.2 13.5 218.5 9 0.2 15 221 10 0.2 15.5 224 10 0.2 16 227 10 0.2 18 228.5 9.5 0.2 20 231 9.5 0.2 23.5 232 9.5 0.2 25 234.5 9.5 0.2 27 234 10.5 0.2 28 234.5 10 0.2 2 5 7.5 201 10 1.4 10 202 10 0.2 13 203 10 0.2 14.5 202 9.5 0.2 16 200.5 8.5 0.5 5 12 8.5 160 9 0.7 12 158.5 9.5 0.5 15 158.5 8.5 0.5 17 156 8 0.5 19 155 9 0.5 25 152.5 10.5 0.5 28 151.5 9 0.5 31 150.5 9 0.5 35 150.5 10 0.5 39 150.5 10 0.5 42.5 151.5 10.5 0.5 44.5 153 10 0.5 1 4 44.5 153 10 0.5 46 154 10.5 0.4 48 155.5 10.5 0.4 50 156.5 10.5 1.2 4 14 50 156.5 10.5 1.2 50.5 158.5 10 0.3 52.5 161 9.5 0.3 56 163.5 10 0.2 57 166.5 10 0.2 59 168.5 9.5 0.2 60 170 9.5 0.2 60.5 171 9.5 0.2 62.5 172.5 10 0.2 67 174.5 10 0.2 69 174.5 9.5 0.2 70 176 9.5 0.2 71.5 176.5 10 0.2 71.5 176.5 10 0.2 8 31 50 156.5 10.5 1.2 53.5 155.5 10.5 0.2 55 154.5 10.5 0.2 57 155 10.5 0.2 59.5 155.5 10.5 0.2 61.5 154.5 10.5 0.2 63 152.5 12 0.2 66 152.5 12.5 0.2 65 151.5 12.5 0.2 67.5 151 12.5 0.2 69.5 150.5 12.5 0.2 73 149 13.5 0.2 74.5 148 13.5 0.2 76.5 147.5 13.5 0.2 79.5 147.5 13.5 0.2 82.5 146.5 12.5 0.2 84 146.5 13.5 0.2 86.5 144.5 13.5 0.2 87.5 142 13.5 0.2 88 139.5 14 0.2 89.5 137.5 14 0.2 92.5 137.5 14 0.2 95 136 14 0.1 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0.5 71.5 12 0.7 -1 73 12 0.7 -2.5 74 12 0.7 -4.5 75 12 0.9 -7.5 76 12 0.9 -10.5 77 12 0.9 -13.5 76.5 12 0.9 -15 75.5 12.5 0.9 -17.5 75.5 12.5 0.9 -19.5 75 12.5 0.9 -22 74.5 13 1.3 11 42 -22 74.5 13 1.3 -23.5 73 12.5 0.9 -25 72 12.5 0.9 -26 70.5 12.5 0.9 -27 69 13 0.9 -29 65 13 0.8 -30.5 63 13 0.8 -32 62.5 12.5 0.8 -32.5 60.5 12.5 0.8 -33.5 59 13 0.7 -34.5 57.5 13 0.7 -36 55.5 13.5 0.7 -38 54 13.5 0.7 -39.5 52.5 13.5 0.7 -41.5 51.5 14 0.7 -42.5 50 14 0.7 -46 48.5 14 0.7 -47.5 47.5 14 0.7 -49 46 14 0.7 -51.5 45.5 14 0.7 -53.5 44.5 14 0.7 -56.5 44.5 14 0.7 -59.5 44 14 0.7 -63 43 13.5 0.7 -65.5 42 13.5 0.7 -67.5 40.5 12.5 0.7 -70 39.5 13 0.7 -72 38.5 13 0.7 -74 37 13 0.7 -76 35.5 12.5 0.7 -79 34 13 0.7 -80.5 33.5 12 0.7 -81 31.5 12.5 0.7 -84.5 31 13 0.7 -86.5 29.5 13 0.7 -88.5 27.5 13 0.7 -91.5 26.5 12 0.7 -93.5 26 12 0.7 -96 24 13 0.7 -99 24.5 11.5 0.7 -101 21.5 11.5 0.7 -102.5 22 11.5 0.7 1 5 -102.5 22 11.5 0.7 -103 21 10 0.6 -105 19.5 9.5 0.6 -105.5 18 8.5 0.6 -107.5 17.5 9.5 1.3 12 42 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145 13.5 2.4 -134.5 145 13.5 0.3 -136.5 145 14.5 0.3 -138 145 13.5 0.3 -139 146.5 14.5 0.3 -141 147.5 15 0.2 -143 148 15 0.2 -147 149.5 16 0.2 -149.5 149.5 16 0.2 -151.5 148.5 16 0.2 -156 148.5 15.5 0.2 -159.5 146.5 15.5 0.2 -164 146.5 16 0.2 -166.5 145.5 16 0.2 -168.5 146 15 0.2 -171.5 144.5 15 0.2 4 11 -132 145 13.5 2.4 -128.5 148 13.5 0.3 -127 149.5 13.5 0.3 -126 153 13.5 0.3 -122 154 13.5 0.3 -120 157 13 0.3 -118 159 13 0.3 -115 163 12.5 0.3 -113 166 12.5 0.3 -110 168 12.5 0.3 -109 169 12.5 0.8 3 10 -109 169 12.5 0.8 -107 171.5 12.5 0.3 -105.5 174 12.5 0.3 -103.5 177 12.5 0.3 -101 180 12.5 0.3 -99.5 181.5 13 0.1 -97 185 14 0.1 -95 187.5 14 0.1 -93.5 189 14.5 0.1 -91.5 192 14.5 0.1 4 14 -91.5 192 14.5 0.1 -91.5 193 16 0.1 -91.5 195.5 16 0.1 -90.5 198 16 0.1 -89.5 201.5 16 0.1 -89 204.5 16 0.1 -89 207.5 16 0.1 -88.5 209.5 16 0.1 -88 212.5 15 0.1 -88 214.5 15.5 0.1 -89.5 219.5 15.5 0.1 -90.5 222.5 15.5 0.1 -93.5 224 15.5 0.1 -94.5 224.5 15.5 0.1 3 7 -91.5 192 14.5 0.1 -87 192.5 16 0.1 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154 15.5 0.3 -100.5 156.5 16 0.3 -101.5 159 16 0.3 -103.5 163 16.5 0.3 -105.5 163 16 0.3 -106.5 163 16.5 0.9 3 9 -106.5 163 16.5 0.9 -107.5 160 16.5 0.2 -110 161 16.5 0.2 -114.5 161 16.5 0.2 -116 162 16.5 0.2 -117.5 161.5 17 0.2 -120.5 161 17 0.2 -122.5 158.5 17 0.2 -123 158.5 17 0.2 6 18 -106.5 163 16.5 0.9 -108 165 16.5 0.2 -110 165.5 16.5 0.2 -112.5 167 16.5 0.2 -115.5 169 17.5 0.2 -117 171 18 0.2 -116 175 18.5 0.2 -117 178 18.5 0.2 -119.5 180 18 0.2 -122 183 19 0.2 -121 187 18 0.2 -121.5 190.5 17.5 0.2 -121.5 194.5 16.5 0.2 -118.5 198 16.5 0.2 -122.5 201.5 16.5 0.2 -121 204.5 19 0.2 -121 207 20.5 0.2 -121 208 20.5 0.2 12 36 0.5 79.5 9 1.2 2 82 9 0.3 3 84 9 0.3 7.5 87 9 0.3 10 89 9 0.3 11.5 88 10.5 0.3 16.5 90 10.5 0.3 19 89 10.5 0.3 21 90 9.5 0.3 24 91 10.5 0.3 27 93.5 10.5 0.3 29.5 93 10.5 0.3 32 97 10.5 0.3 34.5 97.5 10.5 0.3 37 99 10.5 0.3 39.5 100.5 10.5 0.3 42 104.5 10.5 0.3 43 106.5 10.5 0.3 45.5 108 10.5 0.3 48 110.5 10.5 0.3 49 112.5 10.5 0.3 53 114.5 11.5 0.3 55 117 11 0.3 56 118 12 0.3 58 120 11 0.3 59 122 12 0.3 61 124 12.5 0.3 61.5 125 12.5 0.3 65 127.5 12 0.2 67 127 12 0.2 69.5 133.5 12 0.1 72 135 12 0.1 74 135 13 0.1 76.5 135.5 13 0.1 77.5 138 12.5 0.1 79.5 139 12.5 0.1 4 17 10 67 9.5 2.2 12 67 10.5 0.4 12.5 69.5 10 0.4 13 71.5 10.5 0.4 14 73.5 10.5 0.4 14 75.5 11.5 0.4 13.5 77 12 0.4 12 79 12.5 0.4 15 80.5 13.5 0.4 16 82.5 12.5 0.4 16 84.5 13.5 0.4 17.5 86.5 14 0.7 16 88.5 14 0.5 18 91.5 14.5 0.5 17.5 93.5 14 0.5 17.5 96 14 0.5 19 96.5 15 1.1 17 52 19 96.5 15 1.1 16.5 99 15.5 0.3 14.5 101 15.5 0.3 13.5 102.5 15.5 0.3 14.5 104.5 14.5 0.3 14.5 106 15.5 0.3 13.5 108.5 15.5 0.3 11 110.5 15.5 0.3 11 113 14.5 0.3 8.5 115.5 14.5 0.3 6.5 119 14.5 0.3 7.5 122 14.5 0.3 9.5 125 14.5 0.3 9 128.5 15 0.3 9.5 131.5 15 0.3 11 132.5 15 0.3 11.5 136.5 15 0.3 9 138.5 15 0.4 8 140.5 15 0.4 8 143 15 0.4 9.5 146.5 15 0.4 10.5 148 15 0.4 11.5 151 15 0.4 12 154.5 15 0.4 13.5 155 15.5 0.4 16 158.5 15 0.4 17 161 15.5 0.4 18.5 162.5 15.5 0.3 15.5 164.5 15.5 0.3 19 166.5 16 0.3 19 170 15 0.3 17 172 16 0.3 16.5 178 16 0.3 18.5 179.5 16 0.3 18 183 16 0.3 15.5 185.5 15 0.3 18 187.5 15.5 0.3 19 190.5 15 0.3 20.5 192 16 0.3 24.5 193.5 16 0.3 29 196 15.5 0.3 31 197.5 16 0.3 32.5 199 15.5 0.3 33 201.5 15.5 0.3 36 203 15 0.3 42 205 16 0.3 44 205 16.5 0.3 45.5 208.5 16 0.2 49.5 210 16.5 0.2 52 212.5 16.5 0.2 55 215.5 16 0.2 55.5 217 16.5 0.2 4 14 55.5 217 16.5 0.2 54.5 219 16.5 0.1 52 218 15.5 0.1 48 218 15.5 0.1 47 220.5 17 0.1 44.5 221.5 17 0.1 42.5 221 16.5 0.1 41.5 225 17 0.1 39 222 17 0.1 35.5 223.5 17 0.1 33.5 222 17 0.1 32 225 17 0.1 31.5 227 17 0.1 31 228.5 17.5 0.1 2 7 55.5 217 16.5 0.2 57.5 217.5 16.5 0.1 61 219.5 17.5 0.1 64 222.5 17.5 0.1 64 226 17.5 0.1 65.5 228 17.5 0.1 66.5 228.5 18 0.1 3 9 19 96.5 15 1.1 21 97 16 0.3 23.5 97 16 0.3 25.5 98.5 16 0.3 28 99 16 0.3 30 100 16 0.3 35 101 16.5 0.3 37 100.5 17 0.3 39.5 101 17 0.3 7 21 39.5 101 17 0.3 38.5 103 16.5 0.3 39 106 17 0.3 40.5 108 17 0.3 40.5 112 17 0.2 42 113.5 17 0.2 44 116 17 0.2 45 118.5 16.5 0.2 45.5 122 17 0.2 47.5 123.5 16 0.2 50.5 125.5 15.5 0.2 52 127 17 0.2 52.5 130 17 0.2 52 133 17 0.2 53.5 137 17 0.2 53.5 141 18.5 0.2 55 144.5 18.5 0.2 51.5 145 18.5 0.2 52 148 18.5 0.2 50 151 18.5 0.2 51.5 154 17.5 0.2 9 23 39.5 101 17 0.3 41.5 101.5 17.5 0.2 44.5 102.5 17.5 0.2 45.5 104.5 18 0.2 49.5 104.5 18.5 0.2 53 107 18.5 0.2 57 108.5 18.5 0.2 60.5 111 18.5 0.2 64.5 110.5 17.5 0.2 67.5 111.5 19 0.2 69.5 113 18.5 0.2 72 118.5 18.5 0.2 71.5 121 18.5 0.2 73.5 126 18.5 0.2 76 129.5 18 0.2 79 134.5 17.5 0.2 79.5 135.5 19 0.2 79 139 19 0.2 81.5 143.5 19 0.2 84 149 19.5 0.2 86 153 19 0.2 87 155.5 18.5 0.2 87 156 18.5 0.2 2 6 10.5 63.5 9.5 2.2 12.5 64 10.5 0.3 15.5 66 10.5 0.3 18 66 10.5 0.3 21.5 68 10 0.3 23.5 71.5 10.5 0.7 4 10 23.5 71.5 10.5 0.7 25.5 74 9.5 0.2 28.5 74 8.5 0.2 31 75 8.5 0.2 34 77.5 8.5 0.2 36 76.5 9.5 0.2 38.5 80 9.5 0.2 42.5 80.5 11 0.2 44.5 82 11.5 0.2 47.5 79 11.5 0.2 10 28 23.5 71.5 10.5 0.7 27.5 72 10.5 0.2 30 75.5 11 0.2 30.5 78 11 0.2 32.5 81 11.5 0.2 34.5 83.5 11.5 0.2 38 86 10.5 0.2 40 87.5 10.5 0.2 41.5 89 10.5 0.2 46.5 93.5 10 0.2 48.5 94 10 0.2 51.5 92.5 10 0.2 54 93.5 10 0.2 58 92.5 10.5 0.2 61.5 95 12 0.2 63 96 12.5 0.2 69.5 96 13 0.2 69.5 97.5 14.5 0.2 73.5 100 16 0.2 75.5 100.5 16 0.2 78 101.5 16 0.2 82.5 104 15.5 0.2 83.5 109 17.5 0.2 86 109 17.5 0.2 89 111.5 17.5 0.2 92 114.5 17.5 0.2 94 114.5 18.5 0.2 95 116 18.5 0.2 5 18 10.5 56 9.5 2.6 14.5 54 12.5 0.2 18.5 53 13 0.7 19.5 52 12.5 0.4 27 50.5 14 0.2 27.5 49.5 14 0.2 29.5 50 15.5 0.2 31.5 50 16.5 0.2 34 51 17 0.2 36.5 50 16 0.2 37.5 48 15.5 0.2 37.5 45.5 15.5 0.2 37.5 43.5 15.5 0.2 37.5 41 15.5 0.2 38 40.5 15.5 0.2 39 38 15.5 0.2 39 35.5 15.5 0.2 41 34 16 0.2 11 25 41 34 16 0.2 44 34.5 16.5 0.2 46 33.5 16.5 0.2 48.5 34 16.5 0.2 50 33 16.5 0.2 54 32.5 18 0.2 55.5 30 18 0.2 57.5 30 18 0.2 59.5 30.5 17.5 0.2 62.5 31.5 18.5 0.2 66.5 33 18.5 0.2 68.5 36 18.5 0.2 75 41 17 0.2 78 41 19 0.2 82 41.5 17.5 0.2 86 43 20 0.2 88 43 20.5 0.2 92 44.5 19 0.2 99 46.5 20 0.2 115 51 20.5 0.2 117.5 56.5 19 0.2 120 53.5 20 0.2 124.5 60 20 0.2 128 62.5 20 0.2 130.5 63.5 20 0.2 6 19 41 34 16 0.2 39.5 32 16.5 0.2 41.5 29.5 17 0.2 45 29.5 17.5 0.2 49 28.5 17.5 0.2 51 29 19 0.2 53 27 19 0.2 57 27.5 19.5 0.2 57 25.5 19.5 0.2 60 25.5 19.5 0.2 62.5 26.5 19 0.2 65.5 24.5 20 0.2 68.5 21 20 0.2 69 19.5 20 0.2 71.5 20 20.5 0.2 73.5 19.5 20 0.2 75.5 18 20.5 0.2 77.5 15 20.5 0.2 78 15.5 19 0.2 CONNECTIONS: 0 1 1 1 2 1 2 1 4 1 4 1 1 1 7 1 8 1 8 1 7 1 11 1 11 1 0 1 14 1 15 1 16 1 17 1 18 1 18 1 20 1 20 1 17 1 16 1 15 1 25 1 26 1 27 1 28 1 29 1 29 1 28 1 32 1 33 1 33 1 35 1 36 1 36 1 35 1 32 1 40 1 40 1 27 1 26 1 44 1 45 1 45 1 44 1 48 1 48 1 25 1 51 1 51 1 14 1 54 1 54 1 /*----------------------------------------------------------------*/ proc geometry() { /* NULL geometry procedure: keeps the user from calling the geometry procedure in isolation. */ printf("\nYou must re-read the entire geometry\n") printf("file to execute geometry().\n\n") }