/*----------------------------------------------------------------
%W% %G%
ctty118a.asc translated Tue Dec 17 10:28:18 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 17.9117 um length = 29.3452 um area = 1651.29 um2
15 three-D points; 17 outline points numbered 377-393
outline diameter = 24.5406 um
5 primary neurites
40 branches totaling 1420.31 um in length, 2087.06 um2 in area
376 tree points translated to 183 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 393
No. trees 6
Text T11118AO, HRP and DAB, 2/2/89
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[5],\
dend2[9],\
dend3[19],\
dend4[25],\
dend5[17]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
soma connect dend5[0] (0), 0.5
/* neurite geometry*/
for i = 0,4 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,8 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,18 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,24 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,16 {
dend5[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,4 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,8 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,18 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,24 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
for i = 1,16 {
dend5[fscan()] connect dend5[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
15
-15.5 -1 -2 0
-15 1.55 -2 6.9
-13.5 2.2 -2 13.6
-13 1.9688 -2 14.938
-9.5 1.1667 -2.1944 22.67
-8.5 0.65 -2.25 24.305
-4.5 0.25 -2.25 27.505
-3.5 0 -2.25 28.004
-1.5 0 -2.25 28.004
0 -2 -2.25 24.005
2 -2.6 -2.45 22.8
2.5 -2.4286 -2.5 21.857
5.5 -2.75 -2.25 13.509
7.5 -3.05 -2.45 6.9007
8 -0.5 -2.5 0
NEURITE COORDINATES AND DIAMETERS:
4 12
-3.5 7 -1 1.9
-4.5 10.5 -2 1.9
-5 12 -3 1.9
-7.5 13 -5 1.7
-10.5 14.5 -5 1.7
-14 15.5 -5.5 1.6
-18 17 -6.5 1.2
-21 18 -7 0.8
-23.5 17.5 -6 0.8
-23.5 19 -5.5 0.4
-26 19 -6 0.4
-28.5 21.5 -7 0.4
3 8
-28.5 21.5 -7 0.4
-31.5 25.5 -6 0.1
-33.5 28.5 -6 0.1
-35 31.5 -6 0.1
-37.5 35 -5.5 0.1
-42.5 42 -5.5 0.1
-44.5 45 -5.5 0.1
-45 45 -6 0.1
1 3
-28.5 21.5 -7 0.4
-30 21 -7.5 0.4
-32 22 -7.5 0.4
1 4
-32 22 -7.5 0.4
-32 24.5 -7.5 0.1
-34 26.5 -7 0.1
-34 26.5 -7 0.1
13 21
-32 22 -7.5 0.4
-33.5 23 -8 0.5
-36.5 25 -8 0.5
-42 28 -7 0.3
-47 31 -7 0.3
-52 32.5 -8 0.3
-57.5 35 -8 0.3
-64.5 37.5 -6.5 0.1
-71 39.5 -6.5 0.1
-77.5 40 -6.5 0.1
-85 42.5 -7 0.1
-91 45.5 -7 0.1
-100 49 -7 0.1
-106 52.5 -7 0.1
-111.5 55 -7 0.1
-117 57 -7 0.1
-122 59 -8 0.1
-130 63 -6 0.1
-135.5 65 -6 0.1
-141 66 -5.5 0.1
-144.5 68 -4.5 0.1
2 4
-8.5 6.5 -2 1.6
-9.5 12 2.5 2.3
-11 15.5 2.5 1.7
-12 18 2 1.5
2 6
-12 18 2 1.5
-13 16 3.5 0.4
-12.5 15 6.5 0.1
-13.5 17 7 0.1
-14 19 5 0.1
-12.5 21 6 0.1
1 3
-12 18 2 1.5
-11 20 2.5 0.8
-11 23 2.5 1.5
4 9
-11 23 2.5 1.5
-7.5 25 2.5 0.1
-5 27.5 4 0.1
-2.5 30 4 0.1
1 32 4 0.1
3.5 33.5 4 0.1
7.5 36 4 0.1
10 38.5 4.5 0.1
13.5 41 5 0.1
1 3
-11 23 2.5 1.5
-12.5 24 1.5 1.1
-13.5 24.5 1.5 1.6
3 9
-13.5 24.5 1.5 1.6
-15.5 22 2.5 0.1
-18.5 20 3 0.1
-19.5 18.5 3.5 0.1
-21 15 3.5 0.1
-21.5 13 3.5 0.1
-25 10.5 4 0.1
-29 8 4 0.1
-32 5 3.5 0.1
2 6
-13.5 24.5 1.5 1.6
-14.5 26.5 1.5 0.3
-16.5 28 2 0.3
-18.5 31 3.5 0.3
-21.5 32.5 4 0.1
-23 33 4 0.1
2 4
-23 33 4 0.1
-25.5 37 4 0.1
-26.5 41.5 4 0.1
-28 45 4 0.1
5 12
-23 33 4 0.1
-26 34 4 0.1
-30 34.5 4 0.1
-35.5 32.5 5 0.1
-38 30.5 5 0.1
-42 29 4.5 0.1
-43.5 25.5 5 0.1
-46.5 21.5 5.5 0.1
-49.5 17.5 7 0.1
-52.5 16 7 0.1
-55.5 17 6.5 0.1
-55.5 17 6.5 0.1
3 5
-1 3.5 1 1.3
-4.5 6.5 -2.5 1.3
-6 11 5 1.3
-6.5 16 5 1.1
-4.5 17.5 5 1.1
2 6
-4.5 17.5 5 1.1
-5.5 19.5 5 0.1
-4.5 21 6 0.1
-8 23 6.5 0.1
-8 26 9 0.1
-8 27.5 10 0.1
1 4
-8 27.5 10 0.1
-7 30.5 10.5 0.1
-6 32 10.5 0.1
-5.5 32.5 10.5 0.1
1 5
-8 27.5 10 0.1
-9 29 10 0.1
-9 33 10.5 0.1
-10.5 36.5 11.5 0.1
-10.5 36.5 11.5 0.1
1 3
-4.5 17.5 5 1.1
-2.5 17.5 6 1.7
-1.5 17.5 6 1.7
1 2
-1.5 17.5 6 1.7
0.5 15.5 5.5 0.1
1 3
0.5 15.5 5.5 0.1
-1 14 5 0.1
-0.5 12 5 0.1
1 4
0.5 15.5 5.5 0.1
2.5 16.5 4 0.1
5.5 14.5 4.5 0.1
5.5 14.5 4.5 0.1
1 5
5.5 14.5 4.5 0.1
6 12 5 0.1
6.5 9.5 5 0.1
6.5 8 4 0.1
6.5 8 4 0.1
2 5
5.5 14.5 4.5 0.1
8.5 14.5 7 0.1
10.5 12 7 0.1
12 8 7 0.1
12 8 7 0.1
2 4
-1.5 17.5 6 1.7
0 19.5 8 1.2
0.5 22 6 1.2
4.5 24 6.5 1.2
2 6
4.5 24 6.5 1.2
7.5 26 6.5 0.1
12 28 6.5 0.1
16.5 30.5 6.5 0.1
18.5 33 7 0.1
18.5 33 7 0.1
3 5
18.5 33 7 0.1
25 33.5 6 0.1
31.5 35.5 6 0.1
37.5 39 6 0.1
41.5 41.5 6 0.1
2 4
18.5 33 7 0.1
20.5 36.5 5.5 0.1
23.5 40 5.5 0.1
26.5 44 5.5 0.1
3 6
4.5 24 6.5 1.2
4.5 26.5 9 1.2
3.5 30.5 10 1.2
4.5 33 12.5 1.2
7 37 12 1.2
8 38 8 1.2
3 8
8 38 8 1.2
8 41 8 0.1
5 40 8 0.1
6.5 44.5 8 0.1
8.5 48 8 0.1
11.5 51.5 8 0.1
11 55.5 8 0.1
10 59 8 0.1
3 7
10 59 8 0.1
6 60.5 8 0.1
3 64.5 8 0.1
0.5 69.5 8 0.1
-1.5 73 10 0.1
-1.5 77.5 11 0.1
-1.5 77.5 11 0.1
3 9
10 59 8 0.1
9 61.5 8 0.1
10.5 64.5 10 0.1
12 67.5 10 0.1
12 72 10 0.1
14 73 9.5 0.1
17.5 75 9.5 0.1
20.5 74.5 9 0.1
21.5 76 9 0.1
8 14
8 38 8 1.2
11.5 39.5 14.5 0.8
14.5 42.5 13 0.8
18.5 47 13 0.5
23.5 53 12 0.5
26 55.5 11.5 0.5
30 57.5 11.5 0.5
36.5 60.5 12 0.5
41 63 12 0.5
45 65 11.5 0.1
49 69 12 0.1
55 74 14.5 0.1
59 78.5 14.5 0.1
61 83 14.5 0.1
1 2
0.5 -5 3.5 5.5
1 -5.5 3.5 5.5
2 5
1 -5.5 3.5 5.5
4 -5 3.5 1.7
9.5 -5 6 1.7
12.5 -4.5 8.5 1.7
15.5 -4 6.5 1.8
2 5
15.5 -4 6.5 1.8
16 -7.5 6.5 0.1
16 -11.5 6.5 0.1
14.5 -15.5 3 0.1
14 -15.5 3 0.1
1 3
15.5 -4 6.5 1.8
18 -2 8.5 1.2
21 -0.5 8.5 1.2
4 9
21 -0.5 8.5 1.2
25 -2 9 0.5
29 -6 8.5 0.5
30 -11 8.5 0.5
31.5 -14 9 0.5
33.5 -20 9 0.1
38 -25.5 8.5 0.1
43.5 -25.5 8.5 0.1
43.5 -25.5 8.5 0.1
2 5
21 -0.5 8.5 1.2
22.5 1.5 8.5 1
25 9.5 8.5 1
26.5 13.5 8 1
29.5 16.5 7 1.4
3 7
29.5 16.5 7 1.4
29.5 19 6.5 0.1
32.5 22 6 0.1
34.5 24 6 0.1
36.5 27.5 5.5 0.1
36.5 34 5.5 0.1
36.5 34 5.5 0.1
2 5
29.5 16.5 7 1.4
31 17 7 1.2
34.5 15.5 6.5 0.8
38 16 6.5 0.8
40 16 6.5 1
3 6
40 16 6.5 1
42 13.5 9 0.1
47 13.5 9 0.1
51.5 9.5 10.5 0.1
57.5 11 11 0.1
57.5 11 11 0.1
2 5
40 16 6.5 1
41.5 19.5 3.5 0.1
41.5 23 8 0.1
43.5 27 8 0.1
43.5 27 9 0.1
2 5
43.5 27 9 0.1
48 26.5 9 0.1
52 25.5 9 0.1
57 25.5 9 0.1
57.5 25.5 9 0.1
1 2
43.5 27 9 0.1
43.5 27 11.5 0.1
1 3
43.5 27 11.5 0.1
40.5 30 11 0.1
40.5 31 11 0.1
1 3
40.5 31 11 0.1
42 33.5 11 0.1
42.5 35.5 11.5 0.1
2 8
40.5 31 11 0.1
40.5 31 11 0.1
37.5 31.5 11 0.1
33.5 33 12 0.1
30.5 36 11 0.1
28.5 39.5 11 0.1
28.5 41.5 11 0.1
28.5 41.5 11 0.1
5 10
43.5 27 11.5 0.1
44 30 8.5 0.1
47.5 33.5 8 0.1
50 36.5 8 0.1
52.5 42 9.5 0.1
54 44.5 9.5 0.1
61.5 51 9.5 0.1
68 52 9.5 0.1
70.5 54.5 9 0.1
73.5 57 9.5 0.1
1 4
1 -5.5 3.5 5.5
1.5 -8.5 2.5 1.6
1.5 -11 2.5 1.6
1.5 -13 3 2.3
1 2
1.5 -13 3 2.3
3 -13.5 5.5 1.7
6 13
3 -13.5 5.5 1.7
9 -15 3 0.7
10.5 -19 4.5 0.6
9.5 -23.5 4.5 0.4
8.5 -27.5 4.5 0.4
11 -31 4.5 0.4
14 -33.5 4.5 0.4
16 -37 4.5 0.4
17.5 -41.5 5 0.4
16 -47 4.5 0.1
12.5 -51.5 5.5 0.1
12 -55.5 6.5 0.1
11 -60 7 0.1
1 4
3 -13.5 5.5 1.7
3 -15.5 8.5 0.6
3 -17.5 8.5 0.6
4 -17.5 11.5 0.6
2 9
4 -17.5 11.5 0.6
6 -17.5 12 0.1
7 -18.5 12 0.1
8 -16.5 12 0.1
9.5 -16.5 12 0.1
10 -15.5 12.5 0.1
12.5 -14.5 14.5 0.1
12.5 -13 15 0.1
12.5 -11 15.5 0.1
5 10
4 -17.5 11.5 0.6
3.5 -19.5 11.5 0.9
4.5 -21.5 12 0.6
5 -24.5 12.5 0.6
4.5 -29.5 12 0.4
3.5 -36.5 10 0.4
4.5 -40 12.5 0.4
3.5 -46.5 13 0.4
-2 -52.5 13.5 0.4
-3.5 -57 14 0.4
1 3
1.5 -13 3 2.3
-0.5 -15 4.5 1.2
-2.5 -17.5 4.5 1.2
3 9
-2.5 -17.5 4.5 1.2
-5.5 -18.5 4.5 0.4
-8.5 -18 4 0.4
-10 -20.5 4 0.4
-11 -23 3.5 0.1
-14.5 -26 3.5 0.1
-17.5 -31.5 4 0.1
-19 -35 4 0.1
-19 -35.5 4 0.1
7 14
-2.5 -17.5 4.5 1.2
-1.5 -23 5 0.3
-0.5 -26 5.5 0.3
1 -28.5 5 0.1
3.5 -31.5 5.5 0.1
4.5 -35 5.5 0.1
7.5 -39 5.5 0.1
9 -45 4.5 0.1
11 -49.5 6 0.1
11 -54 6 0.1
11 -57 6 0.1
11 -64 6 0.1
9 -68 7 0.1
5 -72 9.5 0.1
2 4
-13.5 -0.5 4 1.8
-16 -4.5 3 2.6
-18.5 -10.5 4.5 2.6
-20.5 -15.5 7.5 3.7
2 3
-20.5 -15.5 7.5 3.7
-17.5 -23.5 7 1.9
-18.5 -30 7.5 1.9
1 3
-18.5 -30 7.5 1.9
-22.5 -30.5 7.5 0.1
-23.5 -30 9 0.1
1 4
-23.5 -30 9 0.1
-24 -27.5 9.5 0.1
-26 -25 9.5 0.1
-26 -25.5 9 0.1
2 6
-23.5 -30 9 0.1
-25 -32 8.5 0.1
-28.5 -32 8.5 0.1
-31 -34 8.5 0.1
-31 -36 8.5 0.1
-31 -36 8.5 0.1
2 4
-18.5 -30 7.5 1.9
-16.5 -33 7.5 1
-16.5 -38 9 1
-16 -40 7.5 1.6
2 5
-16 -40 7.5 1.6
-18.5 -43 12.5 0.1
-21 -46 13.5 0.1
-24.5 -44.5 11 0.1
-28.5 -42.5 11.5 0.1
3 7
-16 -40 7.5 1.6
-14 -43 7 0.5
-13.5 -45.5 7 0.5
-14.5 -48 8.5 0.5
-14.5 -52.5 11 0.1
-13.5 -56.5 11.5 0.1
-13.5 -59.5 13 0.1
2 4
-20.5 -15.5 7.5 3.7
-23.5 -17.5 8 1.5
-27.5 -19 7.5 1.5
-30 -21.5 6 1.5
1 3
-30 -21.5 6 1.5
-31.5 -18.5 4.5 0.1
-33.5 -17 5 0.1
1 4
-33.5 -17 5 0.1
-33 -14.5 5 0.1
-33.5 -11 5.5 0.1
-34 -9 5.5 0.1
5 13
-33.5 -17 5 0.1
-36 -19 4.5 0.1
-40 -20.5 4.5 0.1
-46 -23 4.5 0.1
-48.5 -24 4.5 0.1
-52.5 -25 4.5 0.1
-55 -23 4.5 0.1
-57 -23.5 4.5 0.1
-60.5 -23 3.5 0.1
-63 -24.5 4 0.1
-65.5 -26.5 5 0.1
-65.5 -30.5 4.5 0.1
-65.5 -33 5 0.1
1 2
-30 -21.5 6 1.5
-30.5 -23.5 5 1.2
2 5
-30.5 -23.5 5 1.2
-29 -25.5 5 0.3
-28.5 -29.5 5 0.3
-27.5 -34.5 6 0.3
-27.5 -34.5 4.5 0.3
2 6
-27.5 -34.5 4.5 0.3
-26 -37.5 2.5 0.1
-25.5 -40.5 3 0.1
-25.5 -44.5 3 0.1
-24.5 -47.5 3 0.1
-24.5 -49.5 3 0.1
2 4
-27.5 -34.5 4.5 0.3
-30.5 -35 5.5 0.1
-35 -35 5.5 0.1
-38 -34 5.5 0.1
3 9
-30.5 -23.5 5 1.2
-33 -25 4.5 0.7
-35.5 -28.5 4.5 0.7
-37.5 -31.5 4.5 0.7
-38.5 -35.5 4.5 0.7
-41 -41.5 4.5 0.3
-42 -44.5 4.5 0.3
-43.5 -48.5 5 0.1
-43.5 -48.5 5 0.1
CONNECTIONS:
0 1
0 1
2 1
2 1
0 1
0 1
2 1
2 1
4 1
4 1
6 1
6 1
0 1
1 1
1 1
0 1
4 1
5 1
5 1
7 1
7 1
4 1
10 1
11 1
11 1
10 1
14 1
15 1
15 1
14 1
0 1
1 1
1 1
3 1
3 1
5 1
5 1
7 1
7 1
9 1
9 1
11 1
12 1
12 1
11 1
0 1
16 1
17 1
17 1
19 1
19 1
16 1
22 1
22 1
0 1
1 1
2 1
2 1
1 1
5 1
5 1
0 1
8 1
9 1
9 1
8 1
12 1
13 1
13 1
12 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}