/*----------------------------------------------------------------
%W% %G%
ctty118c.asc translated Tue Dec 17 10:28:19 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 11.6739 um length = 26.4317 um area = 969.375 um2
15 three-D points; 17 outline points numbered 1-17
outline diameter = 18.5369 um
4 primary neurites
33 branches totaling 1445.65 um in length, 1884.55 um2 in area
469 tree points translated to 180 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 486
No. trees 5
Text T11118CO, HRP and DAB, good stain, 2/2/89
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[3],\
dend2[9],\
dend3[3],\
dend4[47]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
/* neurite geometry*/
for i = 0,2 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,8 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,2 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,46 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,2 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,8 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,2 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,46 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
15
-11 3 0.5 0
-8.5 0.375 0.25 7.7661
-6 -1 0 13.038
-5 -1.75 0 15.532
-4.5 -2.125 0.0625 16.788
-3 -1.75 0.25 17.564
-1 -0.35 0.05 20.33
-0.5 0.15909 -0.045455 20.711
3.5 -0.068182 -1.1591 15.14
4.5 -0.25 -1.375 13.502
5.5 -0.375 -1.625 11.753
6 -0.4375 -2.1875 10.893
8.5 -0.25 -2.5 7.5
10.5 0.25 -2.5 3.5
10.5 -1.5 -2.5 0
NEURITE COORDINATES AND DIAMETERS:
2 6
-0.5 11 -2 0.5
-0.5 13.5 -2 0.5
-0.5 15.5 -1 0.3
3 18 0.5 0.3
5 20.5 1 0.3
6.5 23.5 2 0.3
1 3
6.5 23.5 2 0.3
9 25 3 0.3
9.5 25 2 0.3
3 9
6.5 23.5 2 0.3
5 25 2 0.3
1.5 26 2.5 0.3
-2.5 26 2.5 0.3
-5.5 25 2.5 0.3
-9.5 25.5 2.5 0.3
-12.5 27 2 0.1
-13.5 29 3 0.1
-11.5 30.5 3 0.1
1 2
-1.5 9 7 0.5
-2.5 9 7 0.5
1 2
-2.5 9 7 0.5
-4.5 9 7 0.5
1 3
-4.5 9 7 0.5
-5.5 6 6.5 0.1
-7 6 5.5 0.1
2 7
-4.5 9 7 0.5
-6 10.5 6.5 0.4
-5 14 8 0.4
-7.5 14.5 8 0.4
-10.5 16.5 8 0.4
-11.5 18 8 0.4
-13 18.5 8 0.6
3 10
-13 18.5 8 0.6
-13 20 7.5 0.3
-13 22.5 7.5 0.3
-14 23.5 8 0.3
-15.5 25 8 0.3
-15 28 8 0.3
-15 31.5 8.5 0.3
-15 35.5 9 0.3
-16 39 8 0.1
-16 39.5 8.5 0.1
1 4
-13 18.5 8 0.6
-14.5 18.5 8 0.3
-17 17.5 7.5 0.3
-19 17.5 6.5 0.3
1 2
-19 17.5 6.5 0.3
-19 19 7 0.3
4 12
-19 17.5 6.5 0.3
-21 17.5 8 0.3
-23 16 8.5 0.3
-25.5 13.5 8 0.3
-26.5 10 9.5 0.3
-24 7.5 8 0.1
-23 6 9 0.1
-20.5 2.5 9 0.1
-19 0.5 9 0.6
-16.5 -1.5 9.5 0.1
-14.5 -4 10.5 0.1
-13.5 -6.5 11.5 0.1
7 16
-2.5 9 7 0.5
-3 10 5.5 0.4
-3 11 5 0.4
0 13 5 0.3
2 14 5.5 0.3
4.5 17 4.5 0.3
11 18 6 0.3
17.5 19 7 0.3
21 20.5 7 0.3
24.5 20.5 7.5 0.3
27.5 19 8 0.3
35 19.5 6 0.3
39 19.5 6 0.1
43.5 20.5 6 0.1
47.5 22 6 0.1
51 23 5 0.1
1 4
6.5 -4.5 0.5 0.5
8.5 -5 0.5 0.5
11 -7 0 0.5
13 -7 2 1.2
2 4
13 -7 2 1.2
17 -7 1 0.1
22 -4.5 1 0.1
23 -3 1 0.1
1 5
13 -7 2 1.2
15 -8 2 0.1
18 -8 2 0.1
20.5 -9.5 0.5 0.1
20.5 -10.5 0 0.1
1 5
-4.5 -9 2.5 5.8
-6 -12.5 2.5 4.2
-8 -15 3 2.4
-9.5 -15.5 3 1.8
-9.5 -15.5 3 1.1
4 10
-9.5 -15.5 3 1.1
-11 -19 2 1.1
-12.5 -21.5 3.5 1.1
-15 -23 3.5 1.7
-17.5 -25.5 3 1.2
-16.5 -29 1 1.2
-14.5 -30 2.5 1.2
-15.5 -32 6 1.2
-19.5 -34 10 1.2
-21.5 -35 9.5 1.9
2 7
-21.5 -35 9.5 1.9
-24.5 -36 9.5 0.8
-27 -36.5 10.5 0.8
-31.5 -36 10.5 0.8
-33.5 -38 10.5 0.8
-34.5 -40.5 8.5 0.8
-34 -42.5 11 0.8
2 6
-34 -42.5 11 0.8
-32.5 -43.5 11.5 1.4
-29.5 -45 10.5 0.5
-26.5 -46.5 10.5 0.5
-24.5 -47.5 11 0.5
-23.5 -49 11 0.5
3 6
-23.5 -49 11 0.5
-21 -50 10.5 0.1
-18.5 -51 10.5 0.1
-14.5 -50.5 10.5 0.1
-7 -49 10.5 0.1
-2.5 -47.5 10.5 0.1
2 5
-23.5 -49 11 0.5
-22 -52 10.5 0.5
-19.5 -55.5 10.5 0.5
-16 -58.5 12 0.5
-16 -58.5 13 0.5
1 3
-16 -58.5 13 0.5
-15.5 -57.5 13 0.1
-14.5 -57.5 13 0.1
4 10
-16 -58.5 13 0.5
-14.5 -59.5 14 0.7
-13.5 -60.5 14 0.7
-13.5 -63 16 0.7
-14 -65.5 17.5 0.7
-10.5 -69 17.5 0.7
-7 -72.5 20 0.7
-5 -74.5 22 0.7
-2.5 -79 19 0.6
-2 -79.5 17 0.4
3 13
-2 -79.5 17 0.4
-2 -78.5 16.5 0.4
0.5 -82.5 17.5 0.4
1.5 -87 17.5 0.4
2.5 -88 17.5 0.4
4 -88.5 17.5 0.4
4 -87 17 0.4
1 -87.5 17 0.4
0.5 -88 18.5 0.4
1.5 -92.5 18.5 0.4
0.5 -94 18.5 0.4
-0.5 -96.5 18.5 0.4
-0.5 -97.5 18.5 0.3
1 5
-0.5 -97.5 18.5 0.3
1 -98.5 19 0.2
1.5 -100 19 0.2
0.5 -100.5 19 0.2
0.5 -100.5 19 0.2
7 23
-0.5 -97.5 18.5 0.3
-0.5 -98.5 18.5 0.2
0.5 -100.5 18.5 0.2
0.5 -103.5 19 0.2
1.5 -107 20 0.2
1 -108.5 19 0.2
0 -110.5 20 0.2
0 -111 21.5 0.2
0.5 -113 21 0.2
-2.5 -112.5 22 0.2
-3 -115 23.5 0.2
-6.5 -115 23.5 0.2
-6.5 -118 25 0.2
-11.5 -119.5 26 0.2
-16 -121.5 27 0.2
-17 -123.5 27.5 0.2
-18 -124.5 27 0.2
-19.5 -123.5 27 1.4
-19.5 -126.5 27 0.1
-20 -129 27.5 0.1
-20.5 -132.5 27.5 0.9
-21 -136.5 26.5 0.1
-21 -136.5 26.5 0.1
3 7
-2 -79.5 17 0.4
-1 -81.5 13 0.4
-0.5 -83 13.5 0.4
2 -82.5 13.5 0.4
2.5 -87 10.5 0.4
3 -93 11.5 0.4
3 -92.5 10.5 0.1
1 3
3 -92.5 10.5 0.1
3 -95 10.5 0.1
3.5 -96.5 10.5 0.1
2 3
3 -92.5 10.5 0.1
4 -98.5 11.5 0.1
5.5 -103 11.5 0.2
4 13
5.5 -103 11.5 0.2
3 -102.5 12.5 0.2
0 -101 12.5 0.2
-2.5 -103 12.5 0.2
-6.5 -104 12.5 0.2
-11 -105.5 13.5 0.2
-14.5 -108 15 0.2
-14.5 -108.5 15 1.6
-17 -111 15 0.1
-19.5 -111.5 16 0.1
-19.5 -113 16 0.1
-21 -115 14.5 0.1
-21 -115.5 15 0.1
3 9
5.5 -103 11.5 0.2
6.5 -107 12 0.5
8 -110.5 12 0.5
8.5 -113.5 12 1.3
9 -116.5 12 0.6
9.5 -118.5 12 0.6
9.5 -122.5 13 0.3
11.5 -127 14.5 0.3
11.5 -129 15 0.3
3 8
11.5 -129 15 0.3
15 -124.5 15.5 0.1
20 -120 15.5 0.1
23.5 -122.5 15 0.1
26.5 -124 15 0.1
27 -128 15 0.1
28 -130.5 15.5 0.1
28 -130.5 15.5 0.1
3 9
11.5 -129 15 0.3
12 -132 15.5 0.1
14.5 -135.5 15.5 0.1
16 -138.5 15.5 0.1
17 -140.5 15.5 0.1
15.5 -141.5 15.5 0.1
16.5 -145 15.5 0.1
17.5 -147 13 0.1
19 -149.5 15 0.1
6 16
-34 -42.5 11 0.8
-35 -45.5 11.5 1
-35 -48.5 11.5 1
-37.5 -49.5 11 0.6
-38 -52.5 13.5 0.6
-39.5 -56.5 14 0.6
-37.5 -61 13 0.6
-38.5 -63 13 0.6
-41.5 -64 15.5 0.6
-41.5 -66.5 16 0.6
-37.5 -69.5 16.5 0.5
-37 -72.5 16.5 0.5
-37.5 -71.5 15.5 0.5
-34.5 -72 17 0.5
-30 -77 17 0.5
-28 -84 17 0.4
2 9
-28 -84 17 0.4
-28 -85.5 18.5 0.1
-30 -86.5 18 0.1
-29 -89 18.5 0.1
-30.5 -90 20.5 0.1
-31 -92 21 0.1
-34 -92.5 21 0.1
-36.5 -95.5 21 0.1
-36.5 -96.5 21 0.1
3 8
-28 -84 17 0.4
-30.5 -84.5 16 0.8
-30.5 -88.5 16.5 0.8
-33 -90 17 0.5
-34.5 -95 17.5 0.5
-35.5 -99 16.5 0.5
-37 -104 16.5 0.4
-37.5 -105.5 16.5 0.4
3 5
-37.5 -105.5 16.5 0.4
-40 -107 16.5 0.1
-44 -107.5 15 0.1
-48.5 -106 15 0.1
-57 -104 15.5 0.1
3 8
-37.5 -105.5 16.5 0.4
-35.5 -106 16.5 0.2
-36 -110 16.5 0.2
-36.5 -113.5 16.5 0.2
-37.5 -116 16.5 0.2
-40 -118.5 17 0.2
-40 -122 17 0.2
-41.5 -124 18.5 0.2
1 3
-21.5 -35 9.5 1.9
-20 -36.5 8.5 0.9
-18.5 -37.5 8.5 0.6
1 2
-18.5 -37.5 8.5 0.6
-19.5 -39 8.5 0.1
1 3
-18.5 -37.5 8.5 0.6
-16.5 -38 8.5 0.6
-16 -38.5 8.5 0.6
1 2
-16 -38.5 8.5 0.6
-15 -37.5 8 0.1
3 8
-16 -38.5 8.5 0.6
-14.5 -39 8 0.6
-12.5 -40 8 0.6
-11 -42 8 0.6
-8.5 -45 7 0.6
-4.5 -47 7.5 0.6
-0.5 -50 7.5 0.6
-1 -50 8 0.6
8 26
-1 -50 8 0.6
-1 -51 9 0.4
-1.5 -51 10 0.4
0.5 -52.5 11 0.4
2.5 -54.5 10.5 0.4
2 -57.5 12 0.4
4 -58.5 13.5 0.3
2 -61 15.5 0.3
2.5 -62 16 0.3
5 -62.5 17 0.3
4.5 -65 17 0.2
3 -67 17.5 0.2
5 -69.5 18.5 0.2
9 -72 19.5 0.2
8 -74.5 20.5 0.2
7.5 -80.5 21 0.2
9 -82.5 21.5 0.2
9.5 -86.5 21.5 0.2
9.5 -88.5 21.5 0.2
8 -89 21.5 0.2
9.5 -93 22 0.2
9.5 -95.5 21 0.2
11 -96.5 21.5 0.2
9.5 -98.5 21.5 0.2
11 -102 20.5 0.2
10.5 -106 20.5 0.2
1 3
10.5 -106 20.5 0.2
12 -110 20 0.2
12 -112.5 19 0.1
4 15
10.5 -106 20.5 0.2
8.5 -106 19 0.2
5.5 -107 19 0.2
4.5 -110 20 0.2
3 -114 19 0.2
4 -117.5 18.5 0.2
2.5 -120 18 0.2
1 -119.5 16 0.2
0.5 -121.5 15.5 0.2
-0.5 -123 15.5 0.2
0.5 -123.5 15.5 0.2
1 -125 15.5 0.2
3.5 -125.5 16 0.2
3.5 -128.5 16 0.2
3.5 -128.5 16 0.2
1 3
-1 -50 8 0.6
1.5 -52 7 0.4
1.5 -52.5 6.5 0.4
1 2
1.5 -52.5 6.5 0.4
2 -51 7 0.1
6 15
1.5 -52.5 6.5 0.4
3.5 -54 6.5 0.4
5 -56.5 7 0.4
5.5 -57.5 7 0.4
9.5 -58.5 6.5 0.4
10 -59.5 7 0.4
13.5 -62.5 9 0.4
16 -64 9 0.4
20 -71 9 0.4
23.5 -70.5 10.5 0.4
23 -72.5 11 0.4
22.5 -75.5 12 0.4
24.5 -79 13.5 0.4
26 -81.5 14.5 0.4
26 -87.5 14.5 0.3
3 12
26 -87.5 14.5 0.3
24 -89 14 0.1
22.5 -91 14.5 0.1
21 -93 15 0.1
18 -94 15 0.1
16 -95 15 0.1
15 -95.5 15 0.1
14 -97 15 0.1
11.5 -98 15 0.1
7 -99.5 15 0.1
7 -100.5 14.5 0.1
7 -100.5 14.5 0.1
1 2
26 -87.5 14.5 0.3
27 -91.5 13 0.4
1 3
27 -91.5 13 0.4
26 -92.5 13 0.1
27.5 -94.5 13 0.1
8 21
27 -91.5 13 0.4
27 -93 13 0.3
26.5 -96.5 12.5 0.3
26 -101.5 12 0.3
22.5 -102.5 13.5 0.3
23.5 -106 15 0.3
27 -111 16 0.3
29 -114.5 15 0.3
29 -116 15 0.3
31.5 -116.5 15.5 0.3
36.5 -121 14.5 1.5
42.5 -120 15 0.3
45.5 -119.5 15 0.3
51 -118 14.5 1.2
53 -117.5 14 0.3
54 -118 14 0.3
55 -113.5 14 0.3
57 -111.5 13.5 0.3
60 -109.5 13 0.3
63.5 -110 13.5 0.3
68.5 -109 12 0.8
5 15
-9.5 -15.5 3 1.1
-9 -10 0 0.5
-11 -8.5 2 0.5
-15 -7.5 4 0.5
-17 -8.5 4 0.5
-19.5 -8.5 5.5 0.5
-21.5 -8.5 4 0.5
-20.5 -7.5 3.5 0.5
-20.5 -8.5 3 0.5
-22 -10 1.5 0.5
-24 -11 3 0.5
-25.5 -7.5 6.5 0.5
-29 -4.5 7 0.8
-31.5 -5 7.5 0.8
-33 -6 7.5 0.8
2 5
-33 -6 7.5 0.8
-34 -9 7 0.5
-33 -11.5 7.5 0.5
-32 -15.5 7.5 0.5
-32 -20 7.5 0.5
5 16
-32 -20 7.5 0.5
-30.5 -21.5 7.5 0.3
-29 -24.5 8 0.3
-28 -27 8 0.3
-27.5 -30.5 10 0.3
-26.5 -32.5 10 0.3
-25 -34 10 0.3
-23.5 -38.5 10 0.3
-22.5 -42 12.5 0.3
-21.5 -45.5 11.5 0.3
-20.5 -47.5 11.5 0.3
-19 -48.5 11.5 0.3
-17 -53 11.5 0.3
-15 -56 10.5 0.3
-11 -57.5 10.5 0.3
-8.5 -58 9.5 0.3
6 18
-32 -20 7.5 0.5
-32.5 -21.5 9 0.7
-34 -23 11 0.7
-37.5 -23 11 0.6
-40 -25 11.5 0.6
-42 -28 12.5 0.6
-44 -28 14 0.6
-47.5 -25 14 0.5
-48.5 -24 14 0.5
-52.5 -24.5 15 0.5
-56 -26 14.5 0.5
-56.5 -27 14.5 0.4
-57.5 -27 15 0.4
-62 -28.5 13.5 0.4
-67 -31.5 13.5 0.4
-67.5 -32.5 10.5 0.5
-68.5 -35 10.5 0.7
-69 -37 11.5 0.7
4 13
-69 -37 11.5 0.7
-67.5 -39.5 12 0.2
-66.5 -41.5 12 0.2
-64.5 -43.5 12 0.2
-64 -46.5 12 0.2
-64 -49.5 12.5 0.2
-64 -52 12.5 0.1
-64.5 -55.5 13 0.1
-64 -58 13 0.1
-64.5 -63 13 0.1
-63 -66.5 13 0.1
-65 -70.5 14.5 0.1
-65 -70.5 14.5 0.1
4 15
-69 -37 11.5 0.7
-70.5 -36.5 11.5 0.5
-72.5 -35 11.5 0.5
-74.5 -33 11 0.4
-76.5 -32 11 0.4
-80.5 -31.5 11.5 0.3
-85.5 -29 12.5 0.3
-87 -29 12.5 0.3
-87 -27 11.5 0.3
-86 -27 12 0.3
-86 -28.5 12.5 0.3
-90.5 -29.5 15 0.3
-94 -30.5 15 0.2
-95.5 -32 15 0.2
-96.5 -30.5 15.5 0.9
2 7
-33 -6 7.5 0.8
-35.5 -6 7 0.8
-38 -4 8 0.8
-42 -2.5 9 0.8
-44.5 -2.5 9.5 0.8
-48 -4 9.5 0.8
-48.5 -4.5 9.5 0.8
10 27
-48.5 -4.5 9.5 0.8
-48 -7.5 10.5 0.5
-48.5 -11 9.5 0.5
-50 -13 9.5 0.5
-52.5 -15 10 0.5
-52 -17 9 0.5
-50.5 -20.5 9 0.5
-48 -22.5 9.5 0.5
-47 -25 9 0.5
-42 -30 9.5 0.5
-40 -35.5 11.5 0.5
-38 -38 11 0.5
-37 -39.5 11 1.8
-35.5 -43.5 10.5 0.4
-32 -47.5 10 0.4
-29 -51 11.5 0.4
-27.5 -55 11.5 0.4
-25.5 -60 11.5 0.4
-25.5 -61.5 11.5 0.4
-27 -61 12 0.4
-24.5 -62.5 11.5 0.2
-23 -65.5 11.5 0.2
-23.5 -66.5 11.5 0.2
-21.5 -67.5 11 0.2
-19.5 -69.5 11 0.2
-15.5 -74 11.5 0.2
-13.5 -76.5 15 0.2
3 11
-48.5 -4.5 9.5 0.8
-49 -3.5 10.5 0.7
-50.5 -2.5 10 0.7
-53.5 -3 10 0.5
-56.5 -2 10 0.5
-57.5 -1.5 10.5 0.1
-58.5 -1 10.5 0.6
-61.5 -0.5 8.5 0.4
-65 1.5 9 0.4
-68.5 4 8.5 0.4
-69.5 4 8.5 0.4
CONNECTIONS:
0 1
0 1
0 1
1 1
1 1
3 1
3 1
5 1
5 1
0 1
0 1
0 1
0 1
1 1
2 1
3 1
3 1
5 1
5 1
7 1
8 1
8 1
7 1
11 1
11 1
13 1
13 1
15 1
15 1
2 1
18 1
18 1
20 1
20 1
1 1
23 1
23 1
25 1
25 1
27 1
28 1
28 1
27 1
31 1
31 1
33 1
33 1
35 1
35 1
0 1
38 1
39 1
39 1
41 1
41 1
38 1
44 1
44 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}