/*----------------------------------------------------------------
%W% %G%
ctty238g.asc translated Tue Dec 17 10:28:23 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 10.966 um length = 19.1375 um area = 659.3 um2
13 three-D points; 15 outline points numbered 25-39
outline diameter = 15.8677 um
4 primary neurites
28 branches totaling 1094.2 um in length, 1959.84 um2 in area
304 tree points translated to 135 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 343
No. trees 6
Text T11238GO, HRB and DAB, 2/23/89
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[11],\
dend2[1],\
dend3[21],\
dend4[19]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
/* neurite geometry*/
for i = 0,10 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,0 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,20 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,18 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,10 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,0 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,20 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,18 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
13
-8.5 -1 11.5 0
-8.5 0.25 11.5 2.5
-6.5 1.45 11.5 8.1
-6 1.3889 11.5 8.7778
-3 0.97222 11.5 12.944
-2 0.875 11.5 14.25
-1 0.5 11.5 15
1 -0.25 11.5 16.5
4 -0.25 11.5 16.5
6 0.5 11.5 11
7 1.1667 11.5 7.6667
7.5 0.875 11.625 4.7566
8 1.5 12 0
NEURITE COORDINATES AND DIAMETERS:
2 6
-8 -1.5 0 5.9
-10.5 -2 4 5.9
-13 -3 5.5 3.9
-16 -4.5 5.5 2.8
-19 -5.5 6.5 2.1
-21.5 -6.5 6.5 2.1
2 5
-21.5 -6.5 6.5 2.1
-24.5 -7.5 9.5 1.5
-26.5 -7.5 10 1.1
-28 -8 10.5 1
-30.5 -9 10.5 0.8
2 5
-30.5 -9 10.5 0.8
-32 -13.5 10.5 0.1
-34 -18 11.5 0.1
-35.5 -21 12.5 0.1
-38 -23.5 11.5 0.1
7 15
-30.5 -9 10.5 0.8
-33 -8.5 10 0.5
-35.5 -9 10.5 0.5
-38 -9.5 10.5 0.5
-40.5 -10.5 9.5 0.4
-44 -11 9 0.4
-46.5 -11.5 9 0.4
-49 -12 9 0.4
-55 -12.5 9 0.2
-59.5 -14 10.5 0.2
-65.5 -15 11 0.1
-70 -16.5 10.5 0.1
-77.5 -18 10.5 0.1
-85.5 -18.5 11 0.1
-94 -22.5 11 0.1
2 7
-21.5 -6.5 6.5 2.1
-23 -5 8 0.9
-24.5 -3.5 8.5 0.9
-27.5 -3.5 8.5 0.9
-30.5 -1.5 10.5 0.8
-33 -1 11 0.8
-33.5 -1 10.5 0.8
1 4
-33.5 -1 10.5 0.8
-32.5 0.5 12 0.1
-32.5 2 12.5 0.1
-32.5 3.5 15 0.1
1 4
-32.5 3.5 15 0.1
-30 4.5 15.5 0.1
-27.5 5.5 16.5 0.1
-25 7.5 19.5 0.1
1 4
-32.5 3.5 15 0.1
-34 5.5 16 0.1
-36.5 6.5 17.5 0.1
-39 7.5 17.5 0.1
2 6
-33.5 -1 10.5 0.8
-35 -1 12 0.4
-37.5 -1 12 0.4
-40.5 -1 11 0.4
-43.5 -1 11.5 0.4
-45.5 -0.5 11.5 0.4
2 6
-45.5 -0.5 11.5 0.4
-45.5 1.5 12 0.1
-46.5 3.5 12 0.1
-47 6 12 0.1
-47.5 8.5 14 0.1
-47.5 8.5 14 0.1
2 7
-45.5 -0.5 11.5 0.4
-48 -1 12 0.3
-50.5 -2 12 0.3
-52.5 -2.5 13 0.3
-55 -3.5 13 0.3
-58 -4.5 13.5 0.3
-61.5 -5.5 16.5 0.1
5 17
-6 9 1.5 0.5
-7.5 9.5 7.5 0.5
-8.5 11 8 0.5
-10 11.5 8.5 0.5
-11 12 8.5 0.5
-11.5 13 8.5 0.5
-13 13 7.5 0.4
-14.5 14.5 8.5 0.4
-16 15.5 8.5 0.4
-18 15 8.5 0.4
-19 14.5 9.5 0.4
-22.5 15.5 10.5 0.3
-24.5 14.5 10.5 0.3
-27 15 14 0.3
-28.5 14.5 13.5 0.1
-30 16 22 0.1
-33 16.5 21 0.1
2 6
2.5 8 3.5 3.1
3 9.5 5.5 3.1
4 10 7.5 3.1
5 11 9 3.1
8 12 10 2.3
8 12 10 2.3
4 12
8 12 10 2.3
10 10.5 14.5 1
14 12 14.5 0.7
18 13 14 0.7
21 14 12.5 0.7
24.5 14 12 0.7
25 13.5 12.5 0.7
27 14 12 0.7
29.5 14 12.5 0.5
33 13.5 13.5 0.5
36.5 13.5 12.5 0.5
38.5 13.5 12.5 1.1
11 18
38.5 13.5 12.5 1.1
40 11 13 0.5
42 11 12.5 0.5
44 11 12 0.5
49.5 11 13.5 0.5
54 11 14 0.3
63.5 11 16 0.3
68.5 11 14.5 0.3
77 11 16.5 0.3
83.5 11.5 18.5 0.3
92 12 16.5 0.3
98.5 11.5 15.5 0.3
103.5 13 16 0.3
109.5 16.5 18 0.3
118.5 19.5 17.5 0.3
123.5 21 18.5 0.1
133 25 18 0.1
140 28 22 0.1
3 9
38.5 13.5 12.5 1.1
40.5 14 13 0.4
44.5 15 12.5 0.4
47 16 14.5 0.4
51.5 17 13.5 0.2
54.5 19 14 0.2
57.5 19.5 15 0.2
60 20 15 0.1
62 20.5 14 0.1
2 7
8 12 10 2.3
9.5 13 11 1.5
12 15 11.5 1.5
14.5 16 12.5 1.5
18 17.5 14 1.5
22 19 15 1.5
23 19 14.5 1.5
4 11
23 19 14.5 1.5
23.5 21 14.5 0.3
25.5 22.5 16 0.3
28.5 23 16 0.3
32.5 25 16 0.1
36.5 26 16 0.1
39 27 16 0.1
42.5 28 16 0.1
45.5 30 16 0.1
48 31 17.5 0.1
52 33 19 0.1
1 3
23 19 14.5 1.5
25 20 16.5 1.2
27.5 21 16.5 1.2
2 7
27.5 21 16.5 1.2
27.5 22.5 17 0.1
26.5 24 19 0.1
27.5 25.5 19.5 0.1
31 27.5 17.5 0.1
33.5 29.5 16 0.1
34.5 29.5 16 0.1
2 5
27.5 21 16.5 1.2
30.5 21.5 16.5 0.9
34.5 22.5 16 0.9
38 23 17 0.9
39 23 15.5 0.9
1 2
39 23 15.5 0.9
38.5 24 15.5 0.4
1 6
38.5 24 15.5 0.4
39 25.5 15.5 0.1
41 28 16 0.1
42 30.5 16 0.1
44 31.5 16 0.1
44 31.5 16 0.1
2 5
38.5 24 15.5 0.4
41 25 16.5 0.1
44.5 26.5 18.5 0.1
47 29 18.5 0.1
47 30 18.5 0.1
1 3
39 23 15.5 0.9
43 23.5 16 1.1
45 23.5 15 1.1
5 10
45 23.5 15 1.1
47 27 18 0.1
50 28.5 18 0.1
53.5 30.5 18 0.1
58 32 19.5 0.1
61.5 33.5 21 0.1
65.5 33.5 21 0.1
68.5 34.5 22.5 0.1
74 34.5 27.5 0.1
77 35.5 30 0.1
1 3
45 23.5 15 1.1
49.5 23 15 0.4
51.5 22.5 16 0.4
2 6
51.5 22.5 16 0.4
52.5 24 16 0.1
55 27.5 14.5 0.1
58.5 29 15 0.1
64 30.5 17 0.1
67 32 17.5 0.1
2 4
51.5 22.5 16 0.4
56 22.5 15 0.4
61 22.5 14 0.4
63.5 22 13.5 0.4
1 4
63.5 22 13.5 0.4
63.5 20 15.5 0.1
62.5 17 15.5 0.1
62.5 14 17.5 0.1
1 2
63.5 22 13.5 0.4
65 22.5 14 0.1
4 9
65 22.5 14 0.1
67.5 25.5 17 0.1
71.5 27.5 17.5 0.1
74.5 29 17 0.1
78.5 31.5 21 0.1
85 34 21.5 0.1
88.5 36.5 19 0.1
94 38 19 0.1
96.5 39 19 0.1
8 13
65 22.5 14 0.1
69 22.5 14 0.1
73.5 23 14.5 0.1
78 24.5 14.5 0.1
83.5 26 14 0.1
89 27.5 16.5 0.1
95 29.5 16 0.1
101.5 31 19.5 0.1
108.5 32.5 18.5 0.1
115 33.5 19 0.1
124 35 19.5 0.1
132.5 36.5 21.5 0.1
132.5 36.5 21.5 0.1
1 2
3.5 -4.5 0.5 7.4
3.5 -4.5 8.5 7.4
1 2
3.5 -4.5 8.5 7.4
3.5 -4.5 11.5 7.4
2 6
3.5 -4.5 11.5 7.4
8.5 -4 11 2.4
11.5 -3 10.5 1.8
15 -2 11 1.6
18.5 -0.5 13.5 1.6
19.5 -0.5 13.5 1.1
2 5
19.5 -0.5 13.5 1.1
23 -2.5 12.5 0.1
25 -1 13 0.1
28.5 -1.5 13.5 0.1
31 -1.5 15.5 0.1
1 2
19.5 -0.5 13.5 1.1
19.5 -0.5 12 0.8
1 4
19.5 -0.5 12 0.8
19.5 1.5 12 0.1
21 4.5 12 0.1
22 5.5 12 0.1
3 9
19.5 -0.5 12 0.8
22 0.5 12.5 1
25 1.5 14 1
27 2 13.5 1
29.5 3 14.5 0.7
33 3.5 15 0.7
35.5 4 14.5 0.7
37.5 4.5 15 0.7
39.5 5.5 16 0.7
1 4
39.5 5.5 16 0.7
39.5 7.5 16 0.1
40 9.5 16 0.1
43.5 11.5 16.5 0.1
2 6
39.5 5.5 16 0.7
42 4.5 14.5 0.7
45.5 4.5 16 0.7
49.5 4 16 0.7
52 4 16 0.7
56 4 16.5 0.7
4 8
56 4 16.5 0.7
59 1.5 15.5 0.1
61.5 -1 15 0.1
65.5 -4 15 0.1
70 -8 17 0.1
76 -9.5 17 0.1
82.5 -8.5 17 0.1
86 -7.5 16 0.1
2 5
56 4 16.5 0.7
58.5 5 15.5 0.7
62.5 5 15 0.7
67 6.5 14.5 0.7
70 7 15 0.7
3 7
70 7 15 0.7
74 6.5 14 0.4
77 4.5 14 0.4
83 2.5 13 0.4
86.5 1 13 0.1
92 1.5 11.5 0.1
97 2.5 10 0.1
4 8
70 7 15 0.7
75 7.5 15 0.1
79 8 16.5 0.1
84.5 9.5 16.5 0.1
86 11.5 18 0.1
90 13 19 0.1
94 14.5 20.5 0.1
97.5 16.5 19.5 0.1
4 14
3.5 -4.5 11.5 7.4
3.5 -7 10.5 1.4
4 -8 13.5 1.4
5 -7 14 0.9
7 -6.5 13.5 0.9
8.5 -8 13 0.9
9 -8.5 12 0.9
11.5 -9.5 10.5 0.7
13.5 -9 11 0.4
16.5 -10.5 10 0.4
18 -9.5 11 0.4
21 -10.5 10.5 0.2
24 -10.5 12.5 0.2
24.5 -10.5 12 0.2
2 5
24.5 -10.5 12 0.2
24.5 -13.5 10 0.1
27.5 -15 10 0.1
31.5 -18 9.5 0.1
33.5 -20.5 8.5 0.1
2 6
24.5 -10.5 12 0.2
28 -9 12 0.1
30.5 -9 13.5 0.1
32.5 -9.5 12 0.1
35 -10 16 0.1
39.5 -8.5 18.5 0.1
2 5
3.5 -4.5 8.5 7.4
0 -6 10.5 1.1
-2 -7 9.5 1.1
-4 -8.5 9 1.1
-4.5 -10.5 10.5 1.8
5 14
-4.5 -10.5 10.5 1.8
-3.5 -12.5 10.5 0.8
-4.5 -14.5 11.5 0.8
-6 -16 11 0.4
-7 -17.5 12 0.4
-6 -19.5 12 0.8
-6.5 -22 9 0.4
-4.5 -23.5 11 0.4
-2 -25.5 10.5 0.1
3.5 -28 14 0.1
7.5 -31.5 13 0.1
10.5 -32 11.5 0.1
12.5 -31 8 0.1
17.5 -30.5 11 0.1
3 9
-4.5 -10.5 10.5 1.8
-6.5 -10 12.5 0.8
-8 -11 14 0.6
-11.5 -14 13 0.4
-13.5 -16.5 14 0.1
-16 -19.5 14 0.1
-18 -21 16 0.1
-19 -23 20 0.1
-20 -24 19.5 0.1
CONNECTIONS:
0 1
1 1
1 1
0 1
4 1
5 1
5 1
4 1
8 1
8 1
0 1
1 1
1 1
0 1
4 1
4 1
6 1
6 1
8 1
9 1
9 1
8 1
12 1
12 1
14 1
14 1
16 1
16 1
18 1
18 1
0 1
1 1
2 1
2 1
4 1
4 1
6 1
6 1
8 1
8 1
10 1
10 1
1 1
13 1
13 1
0 1
16 1
16 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}