/*----------------------------------------------------------------
%W% %G%
frsx097e.asc translated Tue Dec 17 10:28:24 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 11.759 um length = 30.3146 um area = 1119.88 um2
29 three-D points; 34 outline points numbered 1-34
outline diameter = 18.7248 um
3 primary neurites
37 branches totaling 2174.73 um in length, 1377.8 um2 in area
938 tree points translated to 255 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 972
No. trees 4
Text frsx097e.gr1
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[31],\
dend2[33],\
dend3[7]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
/* neurite geometry*/
for i = 0,30 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,32 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,6 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,30 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,32 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,6 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
29
-11.5 -1.5 -1 0
-11 -2.25 -1 2.5
-10 -3.25 -1 4.5
-9.5 -3.6667 -1 5.6667
-8.5 -3.9167 -1 6.8333
-8.5 -3.1667 -1 8.3333
-8 -2.875 -0.5 9.8011
-7.5 -3.0833 -0.5 10.216
-6.5 -3.125 -0.5 11.792
-5.5 -2.9167 -0.44444 12.864
-3 -1.8333 -0.30556 16.678
-2 -1.6 -0.25 17.807
-0.5 -0.7 -0.25 18.407
0.5 -0.33333 -0.25 18.34
2.5 0.5 -0.25 18.007
3.5 0.91667 -0.25 17.84
4 1.5 -0.25 17.007
4.5 2.5938 -0.25 15.196
5.5 3.0312 -0.25 15.071
6.5 3.9688 -0.25 13.946
7 4.8125 -0.25 12.635
7 5.5625 0 11.125
7.5 6.4062 0 9.8125
7.5 7.1562 0 8.3125
8 8 0 7
9 8 0 6
10 8 0 5
10.5 8 0 2
10.5 7 0 0
NEURITE COORDINATES AND DIAMETERS:
3 12
-10 -1.5 0 2.4
-11 -0.5 -1.5 2.8
-12.5 1 -1.5 2.8
-14.5 2 0.5 2.8
-16.5 2.5 2 2.5
-18.5 3.5 3 2.2
-19.5 5 3 2.2
-20.5 6.5 3 2.2
-22 7.5 2 1.6
-23 9 2 1.6
-24 9 2 1.6
-24 9 2 1.6
1 7
-24 9 2 1.6
-23.5 11 2.5 0.4
-23.5 13 2.5 0.4
-24 14.5 2.5 0.4
-24.5 16 2.5 0.4
-25.5 18 2.5 0.4
-25.5 18 2.5 0.4
2 7
-25.5 18 2.5 0.4
-24.5 19.5 2.5 0.1
-22.5 20.5 2.5 0.1
-21.5 23 2.5 0.1
-20 25.5 2.5 0.1
-19 25.5 2.5 0.1
-19 25.5 2.5 0.1
6 29
-25.5 18 2.5 0.4
-27 18.5 3.5 0.1
-26.5 21 3.5 0.1
-27 23 3.5 0.1
-28.5 24.5 3.5 0.1
-26.5 26.5 3.5 0.1
-27.5 28 3.5 0.1
-29.5 28 3.5 0.1
-30.5 30 3.5 0.1
-29 31.5 3.5 0.1
-28 32 3.5 0.1
-27.5 34 4 0.1
-28.5 34.5 4 0.1
-26.5 35 4 0.1
-25.5 36.5 4 0.1
-24.5 37 5 0.1
-25.5 38.5 5 0.1
-24 39.5 5 0.1
-26 40.5 5 0.1
-26 42.5 5 0.1
-26 44.5 5 0.1
-27.5 46 5 0.1
-27.5 47 5 0.1
-26.5 48.5 5 0.1
-25 49 5 0.1
-26 50.5 5 0.1
-27.5 53 5 0.1
-28.5 57 5 0.1
-28 57 5 0.1
1 7
-24 9 2 1.6
-26 9 2 1.6
-28 9 2 1.6
-29 9 2 1.1
-30 8.5 2 1.1
-32 7.5 2 1.1
-32 7.5 2 1.1
4 15
-32 7.5 2 1.1
-36.5 7 2.5 0.2
-38 8 2.5 0.2
-37.5 6 2.5 0.2
-37.5 4 2.5 0.2
-41 5 2.5 0.2
-44 5 2.5 0.2
-45.5 4 2.5 0.2
-48.5 3 2.5 0.2
-49.5 4.5 2.5 0.2
-50.5 5 2.5 0.2
-52 4 2.5 0.2
-52 3 2.5 0.2
-54.5 2.5 2.5 0.2
-55 2.5 2.5 0.2
8 42
-55 2.5 2.5 0.2
-57.5 2 3 0.2
-59 2.5 3 0.2
-60 3.5 3 0.2
-61 4.5 3 0.2
-60.5 6.5 3 0.2
-62 7 3 0.2
-64 6 3 0.2
-65.5 7.5 3 0.2
-65.5 9 3 0.2
-65.5 10 3 0.2
-67.5 9.5 3 0.2
-69 10 3 0.2
-71.5 9.5 3 0.2
-72 10.5 3 0.2
-74 11 3 0.2
-75.5 11 3 0.2
-77 11 3 0.2
-78 11 3 0.2
-78.5 12.5 3 0.2
-79.5 12.5 3 0.2
-81 12.5 3 0.2
-82 13 3 0.2
-84 13.5 3 0.2
-85.5 14.5 3.5 0.2
-88 14 3.5 0.2
-89 15 3.5 0.2
-91 15 3.5 0.2
-92.5 16 3.5 0.2
-94.5 16 3.5 0.2
-96 16.5 3.5 0.2
-97 19 3.5 0.2
-98 20.5 3.5 0.2
-100 19.5 4.5 0.2
-101.5 17.5 3.5 0.2
-104 17 2 0.2
-106.5 15.5 2 0.2
-109 15.5 2 0.2
-110.5 15 2 0.2
-112.5 13.5 2.5 0.2
-112.5 11.5 2 0.2
-112.5 10.5 2 0.2
1 4
-55 2.5 2.5 0.2
-55 1.5 2.5 0.2
-55.5 0 2 0.2
-55.5 0 2 0.2
3 12
-55.5 0 2 0.2
-56 -2 1.5 0.1
-57 -3.5 1.5 0.1
-57 -5.5 1.5 0.1
-57.5 -8.5 2 0.1
-57 -10.5 2 0.1
-56.5 -13 2 0.1
-58 -14 1 0.1
-61 -17 1 0.1
-65 -18 2.5 0.1
-66 -19.5 2.5 0.1
-66 -19.5 2.5 0.1
6 37
-55.5 0 2 0.2
-57.5 -0.5 1.5 0.1
-58.5 -0.5 1.5 0.1
-59.5 -1.5 1.5 0.1
-59.5 -2.5 1.5 0.1
-60.5 -2 1.5 0.1
-62 -2.5 1.5 0.1
-62.5 -3.5 1.5 0.1
-63.5 -3.5 1.5 0.1
-65.5 -3 1.5 0.1
-67 -5.5 1.5 0.1
-68.5 -7 1.5 0.1
-70.5 -7 1.5 0.1
-71.5 -8 1.5 0.1
-71.5 -10 2 0.1
-72.5 -10.5 2 0.1
-74 -11 2 0.1
-74.5 -11.5 3.5 0.1
-73.5 -13.5 3.5 0.1
-73.5 -14.5 3.5 0.1
-75 -14.5 3.5 0.1
-76 -14.5 3.5 0.1
-77 -16 3.5 0.1
-79 -18 2 0.1
-79 -19.5 2 0.1
-80.5 -20.5 2 0.1
-81.5 -21 2 0.1
-81.5 -22.5 2 0.1
-83 -24.5 3 0.1
-84.5 -25 3 0.1
-88 -25 2 0.1
-90.5 -25 2 0.1
-92 -26 2 0.1
-93 -26 2 0.1
-93 -25 2 0.1
-93 -24 2 0.1
-93 -24 2 0.1
2 8
-32 7.5 2 1.1
-34 10 3 0.8
-34.5 13 3 0.8
-36.5 14 3 0.8
-39 14 3 0.8
-42 13.5 3 0.8
-43 14 3.5 1.9
-43 14 3.5 1.9
4 14
-43 14 3.5 1.9
-45.5 13.5 3.5 0.1
-48 12 3.5 0.1
-51 13.5 3.5 0.1
-52.5 12.5 1.5 0.1
-55 11 1.5 0.1
-56.5 11 1.5 0.1
-59 12.5 1.5 0.1
-60.5 14 1.5 0.1
-61.5 15 1.5 0.1
-64 13 1 0.1
-67 13 1 0.1
-69 13 1 0.9
-69 13 1 0.9
3 13
-69 13 1 0.9
-70.5 14.5 1 0.1
-71.5 14.5 1 0.1
-74 16 1 0.1
-75 18 1 0.1
-74.5 19.5 2 0.1
-75.5 20.5 1.5 0.1
-77 19.5 1.5 0.1
-78.5 19 1.5 0.1
-79 20.5 1.5 0.1
-80.5 21 1.5 0.1
-81.5 20.5 3 0.1
-81.5 20.5 3 0.1
6 22
-81.5 20.5 3 0.1
-82 23.5 3 0.1
-84 26.5 3 0.1
-82.5 28 3.5 0.1
-81 30 3.5 0.1
-81 33.5 3.5 0.1
-82 35 5.5 0.1
-84.5 35 5.5 0.1
-84.5 37 5.5 0.1
-85.5 39.5 5.5 0.1
-86.5 41.5 5.5 0.1
-88 42 5.5 0.1
-88 44 5.5 0.1
-88 45.5 5.5 0.1
-91.5 45.5 5.5 0.1
-93.5 45 5.5 0.1
-94.5 46 5 0.1
-95.5 49 5 0.1
-94 50 5 0.1
-95 51.5 5 0.1
-97.5 52.5 5 0.1
-97.5 52.5 2.5 0.1
4 16
-81.5 20.5 3 0.1
-83.5 20.5 3 0.1
-85 22 3.5 0.1
-86.5 20 4 0.1
-88 19.5 2 0.1
-91 20 2.5 0.1
-92 21 2.5 0.1
-94 19.5 2.5 0.1
-96 17 2 0.1
-99 14.5 1 0.1
-100 13.5 1 0.1
-101.5 11.5 1 0.1
-101.5 9 -0.5 0.1
-104.5 7 -0.5 0.1
-105.5 7.5 -1 0.1
-105.5 6.5 0.5 0.1
5 25
-69 13 1 0.9
-70.5 10.5 1 0.1
-73 9.5 1 0.1
-77.5 7.5 1.5 0.1
-79.5 6 1.5 0.1
-81 5.5 2 0.1
-80.5 3 2 0.1
-81 1 1.5 0.1
-82.5 1 2 0.1
-84 0 2 0.1
-82 -1.5 2.5 0.1
-81 -3 2.5 0.1
-82 -4.5 3 0.1
-84 -4.5 3 0.1
-85 -6.5 3 0.1
-86 -7 3 0.1
-85.5 -8.5 3 0.1
-85.5 -10.5 3 0.1
-85.5 -12 3 0.1
-85 -12.5 3.5 0.3
-87 -12.5 3.5 0.3
-88 -13.5 3.5 0.3
-90 -13.5 3.5 0.3
-92 -15 3 0.3
-92 -15 3 0.3
5 16
-92 -15 3 0.3
-92 -17.5 3 0.3
-93.5 -19.5 3 0.3
-96.5 -20.5 3 0.3
-98.5 -22.5 3 0.3
-103 -23 4 0.3
-106 -24 4 0.3
-107.5 -23.5 4 0.3
-111 -25 4 0.3
-115.5 -30.5 4 0.3
-119.5 -32.5 4 0.3
-122 -34.5 4 0.3
-124.5 -38 4 0.3
-126 -40.5 4 0.3
-125 -41.5 4 0.3
-125 -41 3.5 0.3
2 6
-125 -41 3.5 0.3
-127 -42 2.5 0.3
-130 -42 3 0.3
-132 -43 3 0.3
-135 -44 3 0.3
-135 -44 3 0.3
2 6
-125 -41 3.5 0.3
-124 -44 3.5 0.3
-124.5 -45 3.5 0.3
-122.5 -45.5 3.5 0.3
-120 -46 3.5 0.3
-119 -46.5 3.5 0.3
3 14
-92 -15 3 0.3
-93.5 -15.5 1.5 0.3
-95 -15.5 1.5 0.3
-97.5 -15 1.5 0.3
-99 -16 1.5 0.3
-100.5 -16.5 1.5 0.3
-101 -18 1.5 1.1
-103.5 -20 2 0.1
-104.5 -22.5 2 0.1
-108.5 -26 1 0.1
-110.5 -26.5 -0.5 0.1
-112 -24.5 -0.5 0.1
-111 -24 -0.5 0.1
-111 -24 -0.5 0.1
2 7
-43 14 3.5 1.9
-43.5 16 3.5 1.4
-44 18 3.5 0.5
-46.5 18.5 3.5 0.5
-48 20 3.5 0.5
-49 21.5 5 1
-49 21.5 5 1
3 12
-49 21.5 5 1
-50 24 6 0.1
-50 26 5.5 0.1
-50.5 27.5 5.5 0.1
-52.5 27.5 5.5 0.1
-54.5 27.5 5.5 0.1
-55.5 31 6.5 0.1
-55.5 34.5 6.5 0.1
-57 37 6.5 0.1
-59.5 39.5 7.5 0.1
-62 40.5 7.5 0.1
-62 40.5 7.5 0.1
4 15
-62 40.5 7.5 0.1
-63 43.5 7.5 0.1
-61 45.5 7 0.1
-61 46.5 7 0.1
-62.5 47.5 7.5 0.1
-63.5 49 7.5 0.1
-65 50 7.5 0.1
-65.5 52.5 7.5 0.1
-69 54 7.5 0.1
-70.5 54.5 7.5 0.1
-72 56.5 7.5 0.1
-72.5 59.5 7.5 0.1
-75 60.5 7.5 0.1
-76.5 62 7.5 0.1
-76.5 62 7.5 0.1
4 11
-62 40.5 7.5 0.1
-66 40.5 7.5 0.1
-71 39.5 7.5 0.1
-73 38 6 0.1
-76 38.5 6 0.1
-78.5 36 6 0.1
-81 34.5 4 0.1
-84 32.5 4 0.1
-87 32 2.5 0.1
-88.5 32 2.5 0.1
-88.5 32 2.5 0.1
3 9
-88.5 32 2.5 0.1
-91 34 2.5 0.1
-90.5 36.5 2.5 0.1
-92.5 38 2.5 0.1
-95 38 2.5 0.1
-96.5 43.5 2.5 0.1
-96.5 49 2.5 0.1
-95 54.5 2.5 0.1
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1 4
-88.5 32 2.5 0.1
-91.5 31.5 2.5 0.1
-95 32.5 2.5 0.1
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2 6
-95 32.5 2.5 0.1
-97.5 35 2.5 0.1
-98.5 35.5 2.5 0.1
-104 34 2.5 0.1
-108 31 2.5 0.1
-108 31 2.5 0.1
4 10
-95 32.5 2.5 0.1
-98 33 2 0.1
-103 33.5 2.5 0.1
-105.5 34 2.5 0.1
-110 32 2.5 0.1
-113.5 29.5 1 0.1
-115.5 27 1.5 0.1
-120.5 24 1.5 0.1
-121.5 25.5 1.5 0.1
-121.5 25.5 1.5 0.1
2 10
-49 21.5 5 1
-47.5 23.5 5 1.1
-46 26 4 0.6
-45 27 4 0.6
-43 28 4 0.6
-43 29 4 0.6
-44.5 30.5 2 0.6
-44 33.5 2 0.6
-45.5 35 4 0.1
-45.5 35 4 0.1
5 24
-45.5 35 4 0.1
-48 37 4 0.1
-49 37 4 0.1
-49 38 4 0.1
-49.5 39.5 4 0.1
-51.5 40 4 0.1
-53 38 4 0.1
-54 37 4 0.1
-58 37 4 0.1
-61.5 37 4 0.1
-63.5 38 4.5 0.1
-66 36.5 4.5 0.1
-66 37.5 2.5 0.1
-65 39 4 0.1
-68 39.5 4 0.1
-69 39 4 0.1
-71 40.5 4 0.1
-72 41.5 4 0.1
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-76 41.5 3 0.1
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-78.5 42 3 0.1
-81 42.5 4 0.1
-81 42.5 4 0.1
3 12
-45.5 35 4 0.1
-43 36.5 4 0.1
-42 39.5 4 0.1
-42.5 41 5 0.1
-40.5 42.5 5 0.1
-38.5 44 5 0.1
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-40.5 45.5 4 0.1
-36.5 45 4 0.1
-39 46.5 4 0.1
-36 46 4 0.1
-36 46 4 0.1
3 13
-8.5 -7 0 4.5
-10 -8.5 -3 3
-10 -10 -3 2
-11 -12 -3 1.4
-12 -12 -3 1.1
-13 -11 -3 1.1
-15 -10 -3 0.9
-16.5 -10 -3 0.9
-17 -10.5 1.5 0.9
-19.5 -10.5 2.5 0.9
-21 -11 2.5 0.9
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1 7
-23 -11.5 2.5 0.9
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-24.5 -18 3 0.1
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8 32
-24.5 -18 3 0.1
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-30 -17.5 4 0.1
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7 32
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2 8
-39 -27.5 5 0.1
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-53 -31 5.5 0.1
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3 8
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-46.5 -40 5 0.2
CONNECTIONS:
0 1
1 1
1 1
0 1
4 1
5 1
5 1
7 1
7 1
4 1
10 1
11 1
12 1
12 1
11 1
15 1
16 1
16 1
15 1
10 1
20 1
21 1
21 1
23 1
23 1
25 1
25 1
20 1
28 1
28 1
0 1
1 1
1 1
3 1
4 1
4 1
6 1
7 1
7 1
6 1
3 1
0 1
12 1
13 1
14 1
14 1
13 1
17 1
18 1
18 1
17 1
21 1
22 1
22 1
21 1
25 1
25 1
12 1
28 1
28 1
30 1
30 1
0 1
0 1
2 1
2 1
4 1
4 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}