/*----------------------------------------------------------------
%W% %G%
ctt2249a.asc translated Mon Dec 16 17:00:28 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 5.23401 um length = 17.4566 um area = 287.041 um2
10 three-D points; 11 outline points numbered 21-31
outline diameter = 10.5399 um
4 primary neurites
24 branches totaling 631.245 um in length, 738.807 um2 in area
207 tree points translated to 84 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 238
No. trees 6
Text camera lucida of T02249XO, 3/2/89
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[13],\
dend2[1],\
dend3[17],\
dend4[13]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
/* neurite geometry*/
for i = 0,12 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,0 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,16 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,12 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,12 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,0 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,16 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,12 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
10
-8 1 7.5 0
-5.5 0.39286 7.5 4.7857
-4.5 0.58333 7.5 5.8333
-1 0.21875 7.5 7.4375
-0.5 0.25 7.5 7.5
1.5 0.13889 7.3889 7.2812
4 0.35714 6.8929 6.2894
5 0.28571 6.6786 5.5829
7.5 0.25 6.5 3.5
7.5 -1.5 6.5 0
NEURITE COORDINATES AND DIAMETERS:
1 2
9 -4.5 0 4.1
9 -4 -4.5 4.1
4 13
9 -4 -4.5 4.1
10 -7.5 -3 0.3
11 -9 -2.5 0.3
13 -12 -3.5 0.3
13 -15 -3.5 0.3
12 -18 -4 0.3
10.5 -19.5 -6 0.3
10.5 -22 -6.5 0.3
10 -24 -6.5 0.3
11 -26 -6 0.3
11 -28.5 -5.5 0.3
11 -32.5 -6 0.3
11 -32.5 -6 0.3
2 6
9 -4 -4.5 4.1
11 -5.5 0.5 2
13.5 -6.5 1.5 1.8
15.5 -8 4 1.8
17 -9.5 4.5 1.7
18 -11 4 1.7
1 4
18 -11 4 1.7
20.5 -10 4.5 0.3
22.5 -9.5 5 0.3
25.5 -9 5.5 0.3
2 7
25.5 -9 5.5 0.3
26 -7 5.5 0.1
27 -3.5 5.5 0.1
28 -3 5 0.1
29.5 -1.5 4.5 0.1
32 1 5 0.1
32 1 5 0.1
4 10
25.5 -9 5.5 0.3
27 -9 3 0.3
30 -7.5 1.5 0.3
32 -5.5 1.5 0.3
36.5 -4 0.5 0.3
41.5 -0.5 -1 0.3
42 1.5 4 0.1
44.5 5 3.5 0.1
44.5 8.5 3.5 0.1
44.5 8.5 3.5 0.1
1 2
18 -11 4 1.7
18.5 -13.5 5 1
4 8
18.5 -13.5 5 1
16.5 -14.5 5 0.1
14 -18.5 5 0.1
12 -21.5 6 0.1
7.5 -25.5 8.5 0.1
3 -28.5 7.5 0.1
0.5 -32.5 10 0.1
-2.5 -32.5 8 0.1
1 4
18.5 -13.5 5 1
19 -14.5 5 0.8
20 -18.5 4 0.8
20 -18.5 4 0.5
2 6
20 -18.5 4 0.5
22 -19 3.5 0.1
25 -19 4 0.1
28 -20.5 1 0.1
31 -22 0.5 0.1
34 -23.5 0.5 0.1
2 5
20 -18.5 4 0.5
20 -22 5 0.4
19 -25 6 0.4
18.5 -28 6 0.4
17 -30 6 0.4
3 12
17 -30 6 0.4
20 -29 6.5 0.1
21 -28.5 6.5 0.1
24 -29.5 6.5 0.1
26.5 -29.5 6.5 0.1
30 -31 6.5 0.1
31 -32.5 6.5 0.1
31.5 -34 7 0.1
33.5 -35.5 7.5 0.1
37 -36 9 0.1
37.5 -38.5 9 0.1
37.5 -38.5 9 0.1
2 6
17 -30 6 0.4
14 -30 8 0.1
13 -33 8.5 0.1
11.5 -35.5 10.5 0.1
9.5 -38.5 13 0.1
7.5 -41 13 0.1
3 10
5 2 5 0.7
6 4 5.5 0.7
7.5 5 7 0.7
8 7 7 0.4
8.5 9.5 6.5 0.4
11.5 11.5 6.5 0.4
12.5 13.5 8 0.1
14.5 14 7 0.1
16.5 15 5.5 0.1
19 17 3 0.1
1 3
-5 2.5 -3.5 1.3
-6 4.5 4 1.3
-6 4.5 4 1.3
3 9
-6 4.5 4 1.3
-5 7 6.5 0.7
-5 10.5 7.5 0.7
-6.5 12 5.5 0.6
-7 14 6.5 0.6
-6.5 15 8 0.4
-6.5 18 8 0.4
-6.5 20.5 7.5 0.4
-7 22 9.5 0.4
2 5
-7 22 9.5 0.4
-5 25 10 0.1
-3.5 28 9.5 0.1
-2.5 31 12.5 0.1
-1.5 32.5 13.5 0.1
2 7
-7 22 9.5 0.4
-9 23 9.5 0.1
-10 25.5 8.5 0.1
-12 29 9 0.1
-15 29.5 9 0.1
-15.5 32.5 9 0.1
-17 35 9 0.1
1 3
-6 4.5 4 1.3
-9.5 3.5 4 1.1
-12 4.5 4 1.1
1 3
-12 4.5 4 1.1
-15.5 4.5 7.5 0.8
-17 4.5 7.5 0.8
2 7
-17 4.5 7.5 0.8
-17.5 5.5 9 0.3
-20 7.5 9 0.3
-21.5 9 9.5 0.3
-23.5 10.5 9.5 0.3
-26.5 11 9.5 0.3
-26.5 11 9.5 0.3
2 6
-26.5 11 9.5 0.3
-29 11 5.5 0.1
-30.5 12 6 0.1
-33 13.5 5 0.1
-34.5 16 7 0.1
-35.5 17.5 7 0.1
2 4
-26.5 11 9.5 0.3
-28.5 13.5 6.5 0.1
-27.5 18 6.5 0.1
-28.5 20.5 6.5 0.1
5 11
-17 4.5 7.5 0.8
-19 2 10 0.1
-21.5 -1 8 0.1
-23 -3.5 8.5 0.1
-21.5 -9.5 8.5 0.1
-21.5 -13.5 9.5 0.1
-22.5 -20 10 0.1
-23 -25.5 7.5 0.1
-27 -27.5 8 0.1
-29 -29.5 8.5 0.1
-29 -29.5 8 0.1
1 4
-12 4.5 4 1.1
-13.5 7.5 6 0.1
-12.5 9.5 6.5 0.1
-12.5 12 8.5 0.1
1 3
-12.5 12 8.5 0.1
-11 13.5 8 0.1
-10.5 15.5 8 0.1
1 3
-12.5 12 8.5 0.1
-14 13.5 10 0.1
-15.5 17.5 8 0.1
1 4
-15.5 17.5 8 0.1
-15.5 19 10 0.1
-15.5 22.5 8 0.1
-16 25.5 8 0.1
1 3
-15.5 17.5 8 0.1
-20 17.5 8.5 0.1
-20 17.5 8.5 0.1
1 3
-20 17.5 8.5 0.1
-22.5 16 9 0.1
-24.5 16 9 0.1
2 4
-20 17.5 8.5 0.1
-23 20.5 7 0.1
-27 24 6.5 0.1
-27 25 7 0.1
2 3
-3.5 -4 -2.5 0.9
-3.5 -5 6 0.9
-5 -6.5 7 0.9
1 5
-5 -6.5 7 0.9
-4 -9 7.5 0.5
-5 -12 7.5 0.5
-6 -13.5 7 0.5
-6 -13.5 7 0.5
2 4
-6 -13.5 7 0.5
-7.5 -14 7 0.1
-15 -14 6 0.1
-16 -12.5 7 0.1
1 5
-6 -13.5 7 0.5
-5.5 -15 7 0.4
-4.5 -16.5 7 0.4
-4 -20 7 0.4
-4 -21 7 0.1
1 4
-4 -21 7 0.1
-2.5 -24 6.5 0.1
-1 -28.5 6 0.1
-1 -29 6 0.1
2 9
-4 -21 7 0.1
-5.5 -22 8 0.3
-7 -24 8 0.3
-9.5 -26 8.5 0.3
-10.5 -28 7.5 0.3
-11.5 -30 8.5 0.3
-12.5 -32 8.5 0.3
-14.5 -34 9.5 0.3
-15.5 -34.5 9.5 0.3
1 3
-15.5 -34.5 9.5 0.3
-19.5 -34.5 9.5 0.1
-22 -34.5 9.5 0.1
1 5
-15.5 -34.5 9.5 0.3
-15.5 -37 10 0.1
-15.5 -39.5 9.5 0.1
-14.5 -42 10 0.1
-14.5 -42 10 0.1
1 4
-5 -6.5 7 0.9
-7 -7 6 0.6
-9.5 -7.5 7.5 0.6
-13 -7 8 1
1 3
-13 -7 8 1
-16 -5 6 0.1
-19 -3.5 6 0.1
1 2
-13 -7 8 1
-18.5 -8.5 6.5 1
5 13
-18.5 -8.5 6.5 1
-19.5 -6.5 7 0.6
-23 -4 7 0.2
-25 -0.5 8 0.2
-28 0.5 8.5 0.1
-31.5 3 9.5 0.1
-35.5 6 9.5 0.1
-40.5 6.5 6.5 0.1
-42.5 9.5 6.5 0.1
-45 12.5 6.5 0.1
-49 14.5 6.5 0.1
-53.5 14 7 0.1
-56 13.5 6.5 0.1
3 10
-18.5 -8.5 6.5 1
-20.5 -11 6.5 0.1
-22 -12.5 6.5 0.1
-24 -15 8.5 0.1
-27 -16 10.5 0.1
-29 -16.5 11.5 0.1
-32 -18 11.5 0.1
-36.5 -17.5 12 0.1
-38 -16 12.5 0.1
-39 -16 9 0.1
CONNECTIONS:
0 1
0 1
2 1
3 1
3 1
2 1
6 1
6 1
8 1
8 1
10 1
10 1
0 1
1 1
1 1
0 1
4 1
5 1
6 1
6 1
5 1
4 1
10 1
10 1
12 1
12 1
14 1
14 1
0 1
1 1
1 1
3 1
3 1
5 1
5 1
0 1
8 1
8 1
10 1
10 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}