/*----------------------------------------------------------------
%W% %G%
ctt2249c.asc translated Mon Dec 16 17:00:29 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 13.7844 um length = 23.0998 um area = 1000.34 um2
14 three-D points; 16 outline points numbered 1-16
outline diameter = 19.5156 um
4 primary neurites
19 branches totaling 784.578 um in length, 1166.97 um2 in area
216 tree points translated to 95 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 232
No. trees 5
Text T02249CO, HRP and silver, 3/7/89
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[11],\
dend2[1],\
dend3[9],\
dend4[13]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
/* neurite geometry*/
for i = 0,10 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,0 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,8 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,12 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,10 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,0 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,8 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,12 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
14
-9.5 -1 1.5 0
-9 0.33333 1.4167 5.3359
-8 -0.125 1.25 9.7628
-7 -0.125 1.25 13.259
-6 -0.64286 1.25 15.722
-3.5 -0.0625 0.9375 18.16
-2 0.28571 0.75 19.629
0 1.2 0.75 20.655
3 0.9 0.6 18.838
5 1.1667 0.66667 16.68
6 1.2143 0.75 15.437
8.5 2.25 0.75 10.512
10 1.75 0.5 3.5
10 0 0.5 0
NEURITE COORDINATES AND DIAMETERS:
1 4
8.5 8 0 1.9
10 10 0 1.6
12.5 12.5 0 1.6
16 13.5 1 2.1
1 3
16 13.5 1 2.1
19 15.5 2.5 1.1
20.5 15.5 2.5 1.1
2 6
20.5 15.5 2.5 1.1
23 17.5 2.5 0.1
26.5 20.5 2 0.1
30 24 2 0.1
31.5 28 2 0.1
31.5 28 2 0.1
5 16
20.5 15.5 2.5 1.1
22 13.5 4 1.1
23.5 11.5 4.5 1.1
25 10.5 5.5 1.1
28.5 11 5.5 0.8
31 12 5.5 0.8
33 14 4.5 0.8
36 15 2.5 0.8
40.5 15 1.5 0.8
41.5 16.5 1.5 0.6
43 20 2.5 0.6
45.5 23 1.5 0.5
46.5 26.5 2.5 0.5
49 29 2 0.5
50.5 32 0.5 0.5
50.5 32 0.5 0.1
3 8
50.5 32 0.5 0.1
54.5 33.5 -0.5 0.1
58.5 33.5 0.5 0.1
61.5 31.5 0.5 0.1
65 32.5 1 0.1
69 36.5 2.5 0.1
73.5 39.5 2.5 0.1
73.5 39.5 2.5 0.1
1 3
50.5 32 0.5 0.1
50 35 -1 0.3
51 38 0 0.3
3 6
51 38 0 0.3
49 40.5 0 0.1
50.5 45 2 0.1
51.5 51.5 2 0.1
49.5 57 2.5 0.1
49 63 2 0.1
4 10
51 38 0 0.3
54 39.5 -0.5 0.2
56.5 43 1.5 0.2
58.5 46.5 0.5 0.2
58.5 50 0.5 0.2
58 55 1 0.2
59 59 2.5 0.2
61 62.5 1.5 0.2
63 66 1.5 0.2
63 66 1.5 0.2
2 6
16 13.5 1 2.1
17.5 9.5 0 0.1
19 9.5 -0.5 0.1
21 6 -0.5 0.1
23 6.5 -0.5 0.1
26.5 5 -1.5 0.6
2 4
26.5 5 -1.5 0.6
29.5 7 -1.5 0.1
33.5 9.5 -1.5 0.1
36 10.5 -1.5 0.1
4 10
26.5 5 -1.5 0.6
29 4 -2 0.2
33.5 1.5 -2 0.2
37.5 1.5 -2.5 0.2
41 0.5 -2.5 0.2
44.5 0.5 0.5 0.2
50 1.5 0 0.2
57 2.5 -0.5 0.2
62.5 4 -0.5 0.2
62.5 4 -0.5 0.2
7 19
9 -1.5 0.5 2
11 -2.5 -2 2
13.5 -2.5 -5 1.5
17 0.5 -6.5 1.5
19 2 -9.5 0.9
21.5 3.5 -9 0.7
24.5 6 -9 0.4
26.5 7.5 -8.5 0.3
28 8.5 -8.5 0.2
28.5 7 -8.5 0.2
30.5 8.5 -8.5 0.1
31.5 10.5 -8.5 0.1
37.5 13 -8.5 0.1
39.5 14.5 -9.5 0.1
41.5 15 -9 0.1
43.5 16.5 -9 0.1
48 21 -10 0.1
52 24 -9 0.1
54 24.5 -8 0.1
1 3
-10 -1.5 0 3.1
-13.5 -3 0 1.9
-16.5 -5 0 1.9
1 2
-16.5 -5 0 1.9
-18.5 -11.5 0 0.1
5 9
-18.5 -11.5 0 0.1
-21 -15 -1 0.1
-24 -20 -1 0.1
-27.5 -24 -0.5 0.1
-32 -26.5 0.5 0.1
-39.5 -31.5 1.5 0.1
-48.5 -34.5 2 0.1
-56 -36.5 2.5 0.1
-56 -36.5 2.5 0.1
2 5
-18.5 -11.5 0 0.1
-17.5 -14 -1.5 0.1
-16.5 -19 -0.5 0.1
-17.5 -24 5.5 0.1
-18 -27 4 0.1
3 7
-16.5 -5 0 1.9
-19.5 -3.5 -2 1.9
-22.5 -2 -1 1.9
-24.5 -2 -1 1.9
-27 0.5 -0.5 1.9
-32 -1 -2 1.7
-36 -1.5 -2 1.7
1 3
-36 -1.5 -2 1.7
-37.5 -4.5 -1.5 0.1
-39 -6.5 2 0.1
1 4
-39 -6.5 2 0.1
-42.5 -6 2 0.1
-48.5 -5.5 2.5 0.1
-48.5 -5.5 2.5 0.1
2 4
-39 -6.5 2 0.1
-38 -10.5 2 0.1
-40 -14 2 0.1
-40.5 -16 2 0.1
8 23
-36 -1.5 -2 1.7
-37.5 0.5 -3.5 0.8
-39 1 -3.5 0.8
-40 4.5 -2 0.8
-43 5 -3 0.8
-46.5 5.5 -2 0.8
-49 7.5 -1.5 0.8
-52 8 -1.5 0.6
-55 9.5 -1 0.6
-55 13 1.5 0.6
-56.5 14 0 0.6
-60 13.5 -0.5 0.6
-62 13.5 -0.5 0.6
-63.5 17 -0.5 0.6
-67.5 17 0 0.6
-71 17 0 0.4
-73 17 0 0.4
-73 19.5 -1.5 0.3
-75 21 -1.5 0.3
-78 18.5 -1.5 0.3
-80.5 18 -1.5 0.3
-80 22.5 -2.5 0.3
-83.5 27 0.5 0.1
1 5
-4 9 0 3.7
-5 10.5 0 3.7
-6 13 -0.5 2.2
-7.5 15.5 1 3.1
-8.5 16.5 1 2.5
3 6
-8.5 16.5 1 2.5
-6.5 21 1 0.1
-2.5 24 1 0.1
1 31 1.5 0.1
1.5 37.5 1.5 0.1
1.5 37.5 1.5 0.1
1 4
-8.5 16.5 1 2.5
-10.5 16 1 1.5
-12.5 16.5 -1 1.5
-14 18 -1 2.2
3 8
-14 18 -1 2.2
-14 21 -1 1.2
-15 25 -0.5 0.8
-14.5 29.5 -0.5 0.8
-15.5 31.5 -0.5 0.5
-14 35.5 0 1.3
-14.5 37 -0.5 1.1
-13.5 41 -1 1
3 6
-13.5 41 -1 1
-15.5 44 -1 0.1
-20 43.5 -1 0.1
-24 47 -2.5 0.1
-26.5 51 -2 0.1
-29 53 -2 0.1
1 2
-13.5 41 -1 1
-11.5 42 0 0.1
4 9
-11.5 42 0 0.1
-9.5 46.5 0.5 0.1
-9 50.5 0.5 0.1
-9.5 56 1 0.1
-9.5 60.5 1 0.1
-11.5 66.5 2 0.1
-12 72 2 0.1
-10.5 78 2.5 0.1
-10.5 78 2.5 0.1
5 9
-11.5 42 0 0.1
-7.5 43.5 0 0.1
-3.5 45.5 0 0.1
-0.5 47.5 0 0.1
2.5 50.5 0 0.1
7 56 -0.5 0.1
8.5 62 -0.5 0.1
8.5 69 -0.5 0.1
9.5 74 -0.5 0.1
4 14
-14 18 -1 2.2
-16.5 16.5 0.5 0.8
-19 16 0 0.8
-21 18 0 1.9
-22.5 20 0.5 1.3
-24 21.5 0 1
-23.5 24 1.5 0.7
-24.5 25.5 1.5 0.7
-26.5 25.5 1.5 0.5
-28.5 25.5 -0.5 0.5
-31.5 28 1.5 0.5
-35 27.5 1.5 0.5
-35 30 2 0.5
-35.5 30 0 0.5
3 8
-35.5 30 0 0.5
-34.5 32.5 -0.5 0.1
-34.5 36.5 -0.5 0.1
-34.5 41 -0.5 0.1
-34 44.5 -0.5 0.1
-34 48.5 -0.5 0.1
-34.5 50.5 -0.5 0.1
-34.5 50.5 -0.5 0.1
2 8
-35.5 30 0 0.5
-38 29.5 -1 0.1
-38.5 31.5 -1 0.1
-39.5 31.5 -2 0.1
-39.5 33.5 -2 0.1
-41.5 34.5 -2 0.1
-44.5 35 0.5 0.1
-45 35 2 0.1
2 6
-45 35 2 0.1
-45.5 37.5 0.5 0.1
-46.5 44.5 0.5 0.1
-45 47.5 0.5 0.1
-44.5 52 0.5 0.1
-44.5 52 0.5 0.1
3 6
-45 35 2 0.1
-49 38 1.5 0.1
-53.5 40 1.5 0.1
-56.5 43 1.5 0.1
-62 43 1.5 0.1
-65.5 43 1.5 0.1
CONNECTIONS:
0 1
1 1
1 1
3 1
3 1
5 1
5 1
0 1
8 1
8 1
0 1
1 1
1 1
0 1
4 1
5 1
5 1
4 1
0 1
0 1
2 1
3 1
3 1
5 1
5 1
2 1
8 1
8 1
10 1
10 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}