/*----------------------------------------------------------------
%W% %G%
ctt3219a.asc translated Mon Dec 16 17:00:30 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 10.4631 um length = 29.2142 um area = 960.298 um2
20 three-D points; 22 outline points numbered 1-22
outline diameter = 17.8546 um
4 primary neurites
19 branches totaling 693.827 um in length, 1251.85 um2 in area
212 tree points translated to 89 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 234
No. trees 5
Text T03219AO, HRP and silver enhancement, 3/24/89.
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[9],\
dend2[11],\
dend3[11],\
dend4[3]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
/* neurite geometry*/
for i = 0,8 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,10 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,10 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,2 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,8 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,10 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,10 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,2 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
20
-9.5 0 0.5 0
-9.5 1 0.25 2.0616
-9.5 2.25 0.25 4.5277
-8.5 0.75 0 9.5
-8 -0.5 0.5 13.038
-5 0.25 0.5 14.534
-4 0.38636 0.5 14.807
-3 -0.72727 0.5 17.574
-0.5 0.36364 0.25 16.735
0.5 0.83333 0.41667 16.355
1 0.6875 0.5 15.407
2.5 0.2 0.5 12.64
3.5 0.25 0.5 11.543
5.5 -0.75 0.5 11.543
6.5 -2 0.5 10.05
7.5 -2.9 0.4 7.8409
10 -4.4 0.15 3.8118
11.5 -4.0625 0 3.875
12 -3.5 0 3
12.5 -4 0 0
NEURITE COORDINATES AND DIAMETERS:
1 4
-7.5 6.5 0.5 1.6
-7 9 0 1.4
-7 10.5 0 1.4
-8.5 12 0 2.5
1 5
-8.5 12 0 2.5
-8 14 0 1.5
-7.5 16 0.5 0.6
-7 17.5 1.5 0.6
-7 18 1.5 1.2
3 11
-7 18 1.5 1.2
-3.5 19.5 4.5 0.1
-4 22.5 3.5 0.1
-2 22.5 3.5 0.1
0 21.5 3.5 0.1
3.5 23 3.5 0.1
6 25 3.5 0.1
8 26.5 3.5 0.1
12 28 3.5 0.1
13.5 29.5 3.5 0.1
13.5 29.5 2.5 0.1
3 11
13.5 29.5 2.5 0.1
15 31 2.5 0.1
16.5 33.5 2.5 0.1
18 34 2.5 0.1
20 36 2.5 0.1
21.5 38 2.5 0.1
23.5 40 2 0.1
23.5 42.5 2 0.1
22.5 46.5 2 0.1
26.5 48 2 0.1
29.5 49 2 0.1
2 5
13.5 29.5 2.5 0.1
13.5 31 3 0.1
12.5 34 3 0.1
13.5 37 3 0.1
15 39 3 0.1
2 7
-7 18 1.5 1.2
-8.5 18.5 1.5 0.1
-9 22 1 0.1
-11 23 1.5 0.1
-13.5 23.5 1.5 0.1
-16.5 24.5 1 0.1
-18.5 25 2 0.1
2 7
-8.5 12 0 2.5
-10 12 -0.5 1.3
-12.5 11 0 1.3
-14 12 0 1.3
-17 13 0 1.3
-19 12 2 1.3
-19.5 11 1 1.3
3 11
-19.5 11 1 1.3
-20 13 1.5 0.1
-21.5 14.5 1.5 0.1
-23.5 14 1.5 0.1
-26.5 14.5 1.5 0.1
-28 14 1.5 0.1
-32 13.5 1.5 0.1
-34 13 1.5 0.1
-36 16 1.5 0.1
-37.5 17 2 0.1
-37.5 17 2 0.1
4 10
-19.5 11 1 1.3
-21.5 10 3 0.1
-25 10 3 0.1
-27.5 7.5 3 0.1
-29.5 5.5 3 0.1
-31.5 2 3 0.1
-32.5 -1 3 0.1
-32 -4.5 3 0.1
-32.5 -8 3 0.1
-34.5 -10.5 3 0.1
2 5
5.5 5.5 0.5 2.3
7.5 7.5 0.5 2.3
9.5 9.5 0.5 2.3
11.5 12 0 2.3
11.5 12.5 1 2.3
2 5
11.5 12.5 1 2.3
11.5 9.5 3 1.8
10 6 5.5 1.3
7 2 7.5 1.3
5.5 0.5 11.5 1.3
4 9
5.5 0.5 11.5 1.3
0.5 -2 11.5 1.3
-4 -6 11 1.3
-7.5 -9.5 12 1.3
-10 -12.5 11.5 1.3
-11.5 -16 11.5 1.3
-14.5 -17 11.5 1.3
-17 -20.5 10 1
-18.5 -23 10 1
1 3
-18.5 -23 10 1
-17.5 -26 10 0.1
-17.5 -26 10.5 0.1
1 2
-18.5 -23 10 1
-20.5 -23.5 10 1.1
4 9
-20.5 -23.5 10 1.1
-21 -26 9 0.8
-20 -30 10 0.5
-19 -34.5 10.5 0.5
-18.5 -38 14.5 0.5
-17.5 -42.5 14.5 0.5
-14 -46.5 14 0.1
-16.5 -50.5 14 0.1
-18.5 -53 14 0.1
9 22
-20.5 -23.5 10 1.1
-23 -24.5 10.5 0.5
-26 -26 10.5 0.5
-28.5 -28 11.5 0.5
-30 -28 11.5 1.2
-31.5 -30.5 11.5 1.2
-32.5 -32 12 0.5
-36 -35.5 16 0.3
-39.5 -39 16 0.3
-43 -44.5 16 0.3
-44.5 -47.5 16 0.3
-46 -49.5 16 0.3
-48.5 -51.5 16.5 0.3
-51 -56.5 16.5 0.3
-52.5 -60.5 15 0.3
-51 -64 15 0.3
-52.5 -68.5 15 0.3
-54 -70.5 16 0.3
-58 -71.5 16 0.3
-58 -74.5 16 0.3
-61 -81 14.5 0.3
-61.5 -84.5 14.5 0.1
5 9
5.5 0.5 11.5 1.3
6.5 -4.5 12 1.1
3.5 -10 12 1.1
1 -13.5 12 0.7
-2.5 -17 11.5 0.7
-6.5 -20.5 11.5 0.6
-8.5 -23.5 11.5 0.4
-11.5 -27 11.5 0.4
-15 -31.5 10 0.8
2 7
-15 -31.5 10 0.8
-13.5 -33.5 9.5 0.3
-11.5 -37 10.5 0.3
-9.5 -38 10.5 0.3
-7 -38 10.5 0.1
-5.5 -40.5 10 0.1
-5 -41 10 0.1
3 10
-15 -31.5 10 0.8
-16 -30.5 9.5 0.6
-18.5 -29 9.5 0.6
-21 -28 9.5 0.4
-25.5 -26 9.5 0.4
-27.5 -24 10 0.4
-30 -23 10 0.4
-32 -22.5 12.5 0.4
-36.5 -23 12.5 0.4
-38.5 -21.5 10.5 0.1
5 13
11.5 12.5 1 2.3
14.5 16 3 0.4
16.5 19 4 0.4
18 20 4 0.4
20.5 22.5 4 0.1
22.5 24.5 4.5 0.4
24.5 27 5.5 0.2
27 30.5 6.5 0.2
30 35 5 0.2
33.5 38 5.5 0.2
35.5 41.5 5 0.2
38.5 44 5 0.1
40 48.5 4.5 0.1
1 3
8 -4.5 0 5.1
11.5 -4.5 -2 4
11.5 -4 -1 4
3 8
11.5 -4 -1 4
14 -1.5 -5 1.4
15.5 0.5 -5 1.4
19.5 2 -3 1.4
24 4.5 -2.5 0.8
27 6 -4.5 0.8
30.5 7 -5.5 1
32.5 5.5 -6.5 1
2 5
32.5 5.5 -6.5 1
37 3 -7 0.6
41 1.5 -7 0.6
43.5 4 -7 0.2
47.5 6 -5 0.2
2 5
32.5 5.5 -6.5 1
35 3 -7 0.2
38 0 -7 0.2
43 0 -7 0.2
45.5 2 -7 0.2
2 5
11.5 -4 -1 4
13.5 -5.5 0.5 1.1
16.5 -6 1 1.1
18.5 -8 3 1.1
18.5 -8 4.5 1.1
3 8
18.5 -8 4.5 1.1
19.5 -11.5 5.5 0.2
19 -14.5 8.5 0.2
17 -16 9.5 0.2
17 -17.5 8.5 0.2
14 -19.5 8.5 0.2
14 -22 8.5 0.2
14 -25.5 8.5 0.1
2 6
18.5 -8 4.5 1.1
21.5 -6 4 0.6
24 -6 4 0.6
27 -7 4 0.4
30 -8.5 4.5 0.4
30 -9 7 0.1
2 4
30 -9 7 0.1
32 -11.5 6.5 0.1
31 -16.5 4 0.1
30.5 -19.5 4 0.1
2 6
30 -9 7 0.1
29 -11 9.5 1
29 -13 9 1
28.5 -15.5 8 0.4
26 -19.5 8.5 0.1
26 -19.5 8.5 0.1
1 5
26 -19.5 8.5 0.1
27 -22.5 8.5 0.1
28 -26 8.5 0.1
28.5 -29 8 0.1
28.5 -29 8 0.1
2 5
26 -19.5 8.5 0.1
26 -22 8.5 0.1
25 -26 8.5 0.1
25 -30.5 8.5 0.1
25 -30.5 8.5 0.1
2 6
2.5 -5.5 -1 0.7
2.5 -7.5 -1 0.7
4 -10.5 -0.5 1.3
5 -13 1 1.3
4 -14.5 2 0.4
3.5 -18 1 0.1
2 4
3.5 -18 1 0.1
6.5 -21 0.5 0.1
6.5 -25.5 0 0.1
6.5 -27 0 0.1
3 7
3.5 -18 1 0.1
2 -22.5 0.5 0.1
1 -26 0.5 0.1
-1.5 -30.5 1.5 0.1
-6 -34 1.5 0.1
-13.5 -37 1.5 0.1
-13.5 -37 1.5 0.1
CONNECTIONS:
0 1
1 1
2 1
2 1
1 1
0 1
6 1
6 1
0 1
1 1
2 1
2 1
4 1
4 1
1 1
7 1
7 1
0 1
0 1
1 1
1 1
0 1
4 1
4 1
6 1
6 1
8 1
8 1
0 1
0 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}