/*----------------------------------------------------------------
%W% %G%
ctty118b.asc translated Mon Dec 16 17:00:35 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 11.74 um length = 22.8518 um area = 842.828 um2
16 three-D points; 18 outline points numbered 1-18
outline diameter = 17.9524 um
3 primary neurites
18 branches totaling 725.066 um in length, 821.882 um2 in area
216 tree points translated to 88 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 234
No. trees 4
Text T11118BO, HRP and DAB, 2/2/89
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[19],\
dend2[7],\
dend3[7]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
/* neurite geometry*/
for i = 0,18 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,6 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,6 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,18 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,6 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,6 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
16
-10.5 0 -0.5 0
-9.5 0.375 -0.5 6.25
-8.5 -0.16667 -0.5 10.667
-8 0 -0.5625 12.001
-6.5 -0.525 -0.75 13.959
-3 -0.65625 -0.75 16.32
-2.5 -0.71429 -0.75 16.579
0.5 -0.5 -0.75 17.007
2 -0.85 -0.75 15.708
4.5 -1.6 -0.75 13.209
5.5 -2 -0.75 12.01
6.5 -2.2 -0.75 10.412
8 -2.35 -0.9 8.3024
9 -1.25 -1 4.5
9 -0.25 -1 2.5
9 1 -1 0
NEURITE COORDINATES AND DIAMETERS:
1 4
-2 3.5 6 1.5
-1.5 6 6.5 1.5
-1 9.5 5.5 1.5
-1.5 11.5 5.5 1.7
2 4
-1.5 11.5 5.5 1.7
-5.5 14.5 4 1.7
-10.5 14.5 5.5 1.7
-13 14.5 5.5 1.7
2 5
-13 14.5 5.5 1.7
-15 17 7 1
-19.5 19.5 8 1
-22.5 21 10 1
-26.5 23 10.5 0.8
2 4
-26.5 23 10.5 0.8
-33 25 9.5 0.5
-37.5 25.5 11 0.5
-40 25 11 0.5
2 6
-40 25 11 0.5
-42.5 22.5 11 0.1
-45 19 10.5 0.1
-46 18 10.5 0.1
-49 18 9.5 0.1
-49 18 12.5 0.1
1 3
-49 18 12.5 0.1
-51.5 21.5 12.5 0.1
-53 24 13 0.1
1 3
-49 18 12.5 0.1
-49 14 14 0.1
-51.5 13.5 13 0.1
2 7
-51.5 13.5 13 0.1
-48 10.5 14.5 0.1
-43.5 9 15 0.1
-43 11 14.5 0.1
-41 13 14 0.1
-41.5 14.5 14 0.1
-44.5 15 14 0.1
2 6
-51.5 13.5 13 0.1
-53.5 11.5 12 0.1
-54 8 12 0.1
-56 6.5 12.5 0.1
-58.5 5.5 12.5 0.1
-58.5 5.5 12.5 0.1
5 12
-40 25 11 0.5
-45.5 25.5 11.5 0.1
-49 26 11.5 0.1
-52 26 12 0.1
-56 26 13.5 0.1
-60.5 26 13.5 0.1
-66.5 26.5 16 0.1
-69.5 26 15.5 0.1
-76.5 25.5 16.5 0.1
-79.5 24 17 0.1
-83 23 19 0.1
-87.5 22.5 17.5 0.1
3 6
-26.5 23 10.5 0.8
-31.5 28 12.5 0.1
-34 30 13.5 0.1
-37 34.5 13.5 0.1
-42 36 10.5 0.1
-44 37 12.5 0.1
1 3
-13 14.5 5.5 1.7
-17 13 5.5 0.7
-20 12 6.5 0.7
3 8
-20 12 6.5 0.7
-23 13.5 7.5 0.4
-24 12.5 7.5 0.4
-27.5 14 8 0.4
-32.5 11.5 11.5 0.4
-36 9 12 0.4
-39.5 7.5 14 0.2
-42.5 5.5 14.5 0.2
1 3
-42.5 5.5 14.5 0.2
-42.5 2.5 15 0.1
-45 -1 18 0.1
2 2
-42.5 5.5 14.5 0.2
-47.5 3.5 26 0.1
9 25
-20 12 6.5 0.7
-22 10.5 6.5 0.3
-23.5 9.5 6.5 0.3
-23.5 6 6.5 0.3
-26 4.5 6.5 0.3
-28.5 -5 6.5 0.3
-28 -8.5 6.5 0.3
-29.5 -13.5 6.5 0.3
-29.5 -18 6.5 0.3
-30.5 -20 7 0.3
-30.5 -22.5 6.5 0.3
-32 -23.5 6.5 0.3
-33.5 -25.5 7 0.3
-36 -28 7.5 0.3
-36 -30.5 7 0.3
-39 -32 7.5 0.3
-40.5 -33 8 0.3
-40.5 -38 8 0.1
-42 -42.5 8.5 0.1
-46 -48 8.5 0.1
-47.5 -49.5 8 0.1
-52 -50.5 8.5 0.1
-54.5 -51 8.5 0.1
-57 -48.5 8.5 0.1
-56.5 -49 8.5 0.1
2 6
-1.5 11.5 5.5 1.7
0.5 13.5 5.5 0.4
0 16.5 6 0.4
1 19.5 4 0.4
2 20.5 4.5 0.4
5 21.5 4.5 0.4
1 4
5 21.5 4.5 0.4
6.5 17.5 5 0.1
7 12.5 5 0.1
7 12 5 0.1
2 6
5 21.5 4.5 0.4
4.5 24 5 0.1
7 24 8 0.1
7 26 7.5 0.1
9 28.5 7.5 0.1
10.5 30 7.5 0.1
1 3
0 -9.5 1 3
0.5 -12 5 1.9
1 -13.5 5 1.9
2 6
1 -13.5 5 1.9
0.5 -16 5 1.1
0.5 -20 6 0.9
-2 -23 6.5 0.7
-3.5 -26 6.5 0.7
-5.5 -28 6.5 0.7
3 9
-5.5 -28 6.5 0.7
-4 -29 6.5 0.1
-3 -30 6.5 0.1
-0.5 -29.5 6.5 0.1
-0.5 -32 6 0.1
0.5 -33 6 0.1
2.5 -34.5 8 0.1
5 -32.5 6 0.1
8.5 -33.5 6 0.1
2 4
-5.5 -28 6.5 0.7
-8 -28 8 0.4
-12.5 -28 11.5 0.4
-16.5 -29.5 11 0.4
3 6
-16.5 -29.5 11 0.4
-18.5 -32 11 0.1
-18.5 -35.5 11 0.1
-20.5 -39.5 11.5 0.1
-21 -42.5 11.5 0.1
-21 -46 21 0.1
6 14
-16.5 -29.5 11 0.4
-19 -28 11.5 0.3
-21 -26 13.5 0.3
-23 -26.5 13.5 0.3
-26.5 -28.5 13.5 0.3
-31.5 -29.5 16 0.3
-35 -29 16.5 0.3
-38 -29.5 16.5 0.3
-41 -29 18.5 0.3
-43.5 -29 20.5 0.3
-46 -31 20.5 0.3
-46.5 -35 19.5 0.3
-48 -40 20.5 0.1
-48 -46 22 0.1
5 19
1 -13.5 5 1.9
4.5 -14.5 2.5 0.8
6.5 -14.5 3 0.8
9 -16 3 0.8
10 -15.5 3 0.8
13 -16 3 0.8
14.5 -12 0.5 0.8
14 -15 -0.5 0.1
14.5 -17 1 0.1
14.5 -15.5 -2.5 0.1
14 -14 -2.5 0.1
12 -14 -3.5 0.1
11 -14.5 -3.5 0.1
10 -13.5 -3.5 0.1
10 -11.5 -3.5 0.1
9.5 -8.5 -5 0.1
10 -6.5 -5 0.1
11 -5 -4.5 0.1
11 -3 -4.5 0.1
3 12
-0.5 -11.5 5.5 1.2
-2.5 -12 6.5 0.9
-4 -13 8 0.9
-3.5 -10.5 11 0.6
-3 -10 8.5 0.6
-5 -12.5 9 0.6
-7.5 -13 11 0.6
-9.5 -13.5 10 0.6
-9 -11 13 0.6
-10.5 -10.5 13 0.6
-12.5 -12.5 13 0.6
-13.5 -12 13 0.6
10 32
-13.5 -12 13 0.6
-13.5 -10.5 14 0.3
-12 -10 14 0.3
-13 -12.5 15 0.3
-13.5 -14 16.5 0.3
-12 -15 16 0.3
-11 -15.5 17 0.3
-11 -18.5 17 0.3
-11.5 -21 18 0.3
-12.5 -22 18 0.3
-14 -23.5 18 0.3
-13.5 -26 17.5 0.3
-13.5 -28.5 18 0.3
-15 -31 18.5 0.3
-14 -33.5 19 0.3
-13 -35.5 19 0.3
-13 -39.5 19 0.3
-10.5 -41.5 20 0.3
-11.5 -45.5 20 0.3
-9.5 -48.5 20 0.3
-8.5 -52.5 20 0.3
-9 -56 18 0.3
-7 -58 18 0.3
-4 -62.5 17 0.3
-2.5 -67.5 16 0.3
-1 -70 16 0.3
2.5 -72.5 15 0.3
3.5 -74.5 14 0.3
5.5 -74 14 0.3
6 -75.5 15.5 0.3
8 -78.5 15.5 0.3
9.5 -81.5 15.5 0.3
1 4
-13.5 -12 13 0.6
-15 -11 13 0.3
-16 -11.5 13.5 0.3
-17 -14 16 0.1
2 5
-17 -14 16 0.1
-20.5 -14 16 0.1
-23 -15 17 0.1
-26 -18.5 17 0.1
-30 -21.5 17.5 0.1
1 5
-17 -14 16 0.1
-18.5 -15.5 15.5 0.1
-20.5 -17.5 15.5 0.1
-22.5 -19.5 16 0.1
-23 -20 16.5 0.1
2 5
-23 -20 16.5 0.1
-25 -23 16.5 0.1
-27 -24 17 0.1
-30 -25 17 0.1
-32.5 -25.5 16 0.1
2 5
-23 -20 16.5 0.1
-23 -23 16 0.1
-24.5 -27 16 0.1
-26 -34.5 11.5 0.1
-26 -34.5 11.5 0.1
CONNECTIONS:
0 1
1 1
2 1
3 1
4 1
4 1
6 1
6 1
3 1
2 1
1 1
11 1
12 1
12 1
11 1
0 1
16 1
16 1
0 1
1 1
1 1
3 1
3 1
0 1
0 1
0 1
2 1
2 1
4 1
4 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}