% # CaBuffer_TC_AS17: % % Calcium buffer concentration dynamics, for generic thalamocortical relay % cells used in (Soplata et al., 2017). % % - References: % - Soplata AE, McCarthy MM, Sherfey J, Lee S, Purdon PL, Brown EN, et al. % Thalamocortical control of propofol phase-amplitude coupling. PLoS Comput % Biol. 2017;13: e1005879. doi:10.1371/journal.pcbi.1005879 % % - Requires: "@iT_TC_AS17" exposed by "iT_TC_AS17" mechanism % % - Exposes: calcium concentration "@CaBuffer_TC_AS17" required for % "iH_TC_AS17" and "iT_TC_AS17" mechanisms % % - Tags: calcium, intrinsic, thalamocortical %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % Parameters tauR = 5 % ms Ca_inf = 0.00024 % mM of calcium, aka 2.4e-4 % See "Interneuron-mediated inhibition synchronizes neuronal activity during % slow oscillation" Chen et al., 2012, Equation 5: A = 10/(2*96489) % mM cm^2/(ms uA) drive conversion of Ca-modifying currents CaBufferIC = 0.0003 CaBufferNoiseIC = 0.00001 % ODEs CaBuffer_TC_AS17' = max(-A.*@iT_TC_AS17, 0) + (Ca_inf - CaBuffer_TC_AS17)./tauR CaBuffer_TC_AS17(0) = CaBufferIC+CaBufferNoiseIC.*rand(1,Npop) % Interface @CaBuffer_TC_AS17 += CaBuffer_TC_AS17