//genesis //nsynapses int densityMax_soma_AMPA_SP = 0, densityMax_soma_GABA_SP = 3, densityMax_pd_AMPA_SP = 0, densityMax_pd_GABA_SP = 6 int densityMax_sd_AMPA_SP = 1, densityMax_sd_GABA_SP = 3 , densityMax_td_AMPA_SP = 2, densityMax_td_GABA_SP = 1 int densityMax_soma_AMPA_FS = 1, densityMax_soma_GABA_FS = 3, densityMax_pd_AMPA_FS = 1, densityMax_pd_GABA_FS = 3 int densityMax_sd_AMPA_FS = 0, densityMax_sd_GABA_FS = 3 , densityMax_td_AMPA_FS = 1, densityMax_td_GABA_FS = 0 //3 6 3 1 int prim_dend_num_SP = 4, sec_dend_num_SP = 8, tert_dend_num_SP = 16*11 int nAMPA_SP = {densityMax_soma_AMPA_SP} + {densityMax_pd_AMPA_SP}*{prim_dend_num_SP} + {densityMax_sd_AMPA_SP}*{sec_dend_num_SP} + {densityMax_td_AMPA_SP}*{tert_dend_num_SP} int nGABA_SP = {densityMax_soma_GABA_SP} + {densityMax_pd_GABA_SP}*{prim_dend_num_SP} + {densityMax_sd_GABA_SP}*{sec_dend_num_SP} + {densityMax_td_GABA_SP}*{tert_dend_num_SP} int prim_dend_num_FS = 3*2, sec_dend_num_FS = 6*4, tert_dend_num_FS = 12*8 int nAMPA_FS = {densityMax_soma_AMPA_FS} + {densityMax_pd_AMPA_FS}*{prim_dend_num_FS} + {densityMax_sd_AMPA_FS}*{sec_dend_num_FS} + {densityMax_td_AMPA_FS}*{tert_dend_num_FS} int nGABA_FS = {densityMax_soma_GABA_FS} + {densityMax_pd_GABA_FS}*{prim_dend_num_FS} + {densityMax_sd_GABA_FS}*{sec_dend_num_FS} + {densityMax_td_GABA_FS}*{tert_dend_num_FS} function add_field (cellpath) str cellpath, CName //echo "entering add_field cellpath" {cellpath} if ({cellpath} == "/library/SPcell_D1" || {cellpath} == "/library/SPcell_D2") foreach CName ({el {cellpath}/##[TYPE=compartment]}) // echo " entered foreach" addfield {CName} nsynallowed_a addfield {CName} nsynallowed_g if ({getfield {CName} position}==1.599999996e-05) // echo "soma" setfield {CName} nsynallowed_a {densityMax_soma_AMPA_SP} setfield {CName} nsynallowed_g {densityMax_soma_GABA_SP} elif ({getfield {CName} position}==3.599999764e-05) // echo "prim" setfield {CName} nsynallowed_a {densityMax_pd_AMPA_SP} setfield {CName} nsynallowed_g {densityMax_pd_GABA_SP} elif ({getfield {CName} position}==6.022999878e-05) // echo "sec" setfield {CName} nsynallowed_a {densityMax_sd_AMPA_SP} setfield {CName} nsynallowed_g {densityMax_sd_GABA_SP} elif ({getfield {CName} position}>7.0e-05) // echo "tert" setfield {CName} nsynallowed_a {densityMax_td_AMPA_SP} setfield {CName} nsynallowed_g {densityMax_td_GABA_SP} end end elif ({cellpath} == "/library/FScell") foreach CName ({el {cellpath}/##[TYPE=compartment]}) addfield {CName} nsynallowed_a addfield {CName} nsynallowed_g if ({getfield {CName} position}==1.999999949e-05) // echo "soma" setfield {CName} nsynallowed_a {densityMax_soma_AMPA_FS} setfield {CName} nsynallowed_g {densityMax_soma_GABA_FS} elif ({getfield {CName} position}>6.0e-05 && {getfield {CName} position}<12.0e-05) // echo "prim" setfield {CName} nsynallowed_a {densityMax_pd_AMPA_FS} setfield {CName} nsynallowed_g {densityMax_pd_GABA_FS} elif ({getfield {CName} position}>14.0e-05 && {getfield {CName} position}<26.0e-05) // echo "sec" setfield {CName} nsynallowed_a {densityMax_sd_AMPA_FS} setfield {CName} nsynallowed_g {densityMax_sd_GABA_FS} elif ({getfield {CName} position}>28.0e-05 && {getfield {CName} position}<50.0e-05) // echo "tert" setfield {CName} nsynallowed_a {densityMax_td_AMPA_FS} setfield {CName} nsynallowed_g {densityMax_td_GABA_FS} end end end end //function end //SP //int nAMPA = 360 //int nGABA = 227 //FS //nAMPA = 127 //nGABA = 93 //echo "nAMPA = "{nAMPA}"" //echo "nGABA = "{nGABA}"" function ndups_a (pDup,n) float pDup int n int nD_a = {round {{pDup}*{n}}} return {nD_a} end function ndups_g (pDup,n) float pDup int n int nD_g = {round {{pDup}*{n}}} return {nD_g} end