TITLE Kdrfast.mod
COMMENT
Fast delayed rectifier K+ currents: Yuen and Durand, 1991:
They couldn't quite fit the fast delayed rectifier (of the squid axon? ?),
so they called it just the fast potassium conductance. Not sure what all it represents anymore.
Aradi shifted the voltage dependence by 16 mV - don't know why.
Someone else shifted it by 65 as compared to the Aradi & Holmes paper. don't know why...
ENDCOMMENT
VERBATIM
#include <stdlib.h> /* Include this library so that the following
(innocuous) warning does not appear:
In function '_thread_cleanup':
warning: incompatible implicit declaration of
built-in function 'free' */
ENDVERBATIM
UNITS {
(mA) =(milliamp)
(mV) =(millivolt)
(uF) = (microfarad)
(molar) = (1/liter)
(nA) = (nanoamp)
(mM) = (millimolar)
(um) = (micron)
FARADAY = 96520 (coul)
R = 8.3134 (joule/degC)
}
NEURON {
SUFFIX ch_Kdrfast
USEION k READ ek WRITE ik VALENCE 1
RANGE g, gmax, ninf, ntau, ik
RANGE myi
THREADSAFE
}
PARAMETER {
v (mV)
celsius (degC) : temperature - set in hoc; default is 6.3
dt (ms)
ek (mV)
gmax (mho/cm2)
}
STATE {
n
}
ASSIGNED {
g (mho/cm2)
ik (mA/cm2)
ninf
ntau (ms)
nexp
myi (mA/cm2)
}
BREAKPOINT {
SOLVE states
g = gmax*n*n*n*n
ik = g*(v-ek)
myi = ik
}
UNITSOFF
INITIAL {
trates(v)
n = ninf
}
PROCEDURE states() { :Computes state variables m, h, and n
trates(v) : at the current v and dt.
n = n + nexp*(ninf-n)
}
LOCAL q10
PROCEDURE rates(v) { :Computes rate and other constants at current v.
:Call once from HOC to initialize inf at resting v.
LOCAL alpha, beta, sum
:q10 = 3^((celsius - 6.3)/10)
q10 = 3^((celsius - 34)/10)
:"nf" fKDR activation system
alpha = -0.07*vtrap((v+65-47),-6)
beta = 0.264/exp((v+65-22)/40)
sum = alpha+beta
ntau = 1/sum
ninf = alpha/sum
}
PROCEDURE trates(v) { :Computes rate and other constants at current v.
:Call once from HOC to initialize inf at resting v.
LOCAL tinc
TABLE ninf, nexp, ntau
DEPEND dt, celsius
FROM -100 TO 100 WITH 200
rates(v) : not consistently executed from here if usetable_hh == 1
: so don't expect the tau values to be tracking along with
: the inf values in hoc
tinc = -dt * q10
nexp = 1 - exp(tinc/ntau)
}
FUNCTION vtrap(x,y) { :Traps for 0 in denominator of rate eqns.
if (fabs(x/y) < 1e-6) {
vtrap = y*(1 - x/y/2)
}else{
vtrap = x/(exp(x/y) - 1)
}
}
UNITSON