// genesis str elem int i, j str ascii_label = {label} str Purkinje_cells_ascii_filename = {filename} @ "PCs_" @ {ascii_label} @ ".ascii" str Stellate_cells_ascii_filename = {filename} @ "stcs_" @ {ascii_label} @ ".ascii" /* storing leak in itotal[0] storing InNa in itotal[1] storing KDr in itotal[2] storing KA in itotal[3] storing CaHVA in itotal[4] storing H in itotal[5] storing Moczyd_KC in itotal[6] storing mf_AMPA in itotal[7] storing pf_AMPA in itotal[8] storing GABAA in itotal[9] storing Ca_pool in itotal[10] storing Ca_nernst in itotal[11] storing spike in itotal[12] */ // stellate cells if ({{number_stellate_cells} > 0}) echo creating ascii-file for stellate cells create asc_file /output/plot_out_stcs setclock 8 4e-5 useclock ^ 8 enable /output enable ^ setfield ^ filename {Stellate_cells_ascii_filename} \ initialize 1 leave_open 1 flush 1 echo Output to {Stellate_cells_ascii_filename} // for (i = {number_stellate_cells}; i > 0 ; i = i - 10) // for (i = 326; i > 325; i = i - 1) for (i = 450; i > 0; i = i - 320) elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma Vm} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend1 Vm} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend2 Vm} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend3 Vm} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} /* elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/GABAA Gk} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/GABAA Ik} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend1/GABAA Gk} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend1/GABAA Ik} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend1/pf_AMPA Gk} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend1/pf_AMPA Ik} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend2/pf_AMPA Gk} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend2/pf_AMPA Ik} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend3/pf_AMPA Gk} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend3/pf_AMPA Ik} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} */ // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE itotal[8] // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE itotal[9] end // addmsg /PID1 ^ SAVE output // addmsg /PID2 ^ SAVE output /* for (i = 234; i > 233; i = i - 1) elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma Vm} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} end // to this 238 is connected but 233 not, hence second-order connection for (i = 259; i > 258; i = i - 1) elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma Vm} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} end */ /* for (i = 226; i > 225; i = i - 1) // for (i = 3; i > 2; i = i - 1) elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma Vm} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} // elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/GABAA Gk} // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} // elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/GABAA Ik} // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE itotal[8] // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE itotal[9] elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/Ca_pool Ca} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend3[3]/Ca_pool Ca} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} end for (i = 126; i > 125; i = i - 1) // for (i = 2; i > 1; i = i - 1) elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma Vm} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} // elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/GABAA Gk} // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} // elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/GABAA Ik} // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE itotal[8] // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE itotal[9] elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/Ca_pool Ca} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend3[3]/Ca_pool Ca} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} end for (i = 26; i > 25; i = i - 1) // for (i = 1; i > 0; i = i - 1) elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma Vm} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} // elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/GABAA Gk} // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} // elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/GABAA Ik} // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE itotal[8] // addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE itotal[9] elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve soma/Ca_pool Ca} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} elem = {findsolvefield /molecular_layer/Stellate[{i-1}]/solve dend3[3]/Ca_pool Ca} addmsg /molecular_layer/Stellate[{i-1}]/solve ^ SAVE {elem} end */ end