COMMENT //%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% // // NOTICE OF COPYRIGHT AND OWNERSHIP OF SOFTWARE // // Copyright 2007, The University Of Pennsylvania // School of Engineering & Applied Science. // All rights reserved. // For research use only; commercial use prohibited. // Distribution without permission of Maciej T. Lazarewicz not permitted. // mlazarew@seas.upenn.edu // //%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% ENDCOMMENT NEURON { POINT_PROCESS Exp2SynNMDA RANGE tau1, tau2, tau12, tau22, e, i, i2 NONSPECIFIC_CURRENT i, i2 RANGE S, S2, Smax, gmax, total, r GLOBAL c } UNITS { (nA) = (nanoamp) (mV) = (millivolt) (uS) = (microsiemens) } PARAMETER { tau1 = 15 (ms) <1e-9,1e9> tau2 = 150 (ms) <1e-9,1e9> : tau12 = 0.05 (ms) <1e-9,1e9> tau12 = 0.2 (ms) <1e-9,1e9> : tau22 = 5.3 (ms) <1e-9,1e9> tau22 = 1.0 (ms) <1e-9,1e9> e = 0 (mV) mg = 1 Smax = 125 c = 1 : c = 1.53775 r = 1 } ASSIGNED { v (mV) i (nA) i2 (nA) S (1) S2 (1) gmax (uS) mgblock (1) factor (1) factor2 (1) total (1) } STATE { A (1) B (1) A2 (1) B2 (1) } INITIAL { LOCAL tp if (tau1/tau2 > .9999) { tau1 = .9999*tau2 } A = 0 B = 0 tp = (tau1*tau2)/(tau2 - tau1) * log(tau2/tau1) factor = -exp(-tp/tau1) + exp(-tp/tau2) factor = 1/factor total = 0 if (tau12/tau22 > .9999) { tau12 = .9999*tau22 } A2 = 0 B2 = 0 tp = (tau12*tau22)/(tau22 - tau12) * log(tau22/tau12) factor2 = -exp(-tp/tau12) + exp(-tp/tau22) factor2 = 1/factor2 total = 0 } BREAKPOINT { SOLVE state METHOD cnexp S = B - A S2 = B2 - A2 :if (S>=Smax) {S = Smax} mgblock = 1.0 / (1.0 + 0.28 * exp(-0.062(/mV) * v) ) i = gmax * r * S * (v - e) * mgblock i2 = gmax * S2 * (v - e) } DERIVATIVE state { A' = -A/tau1 B' = -B/tau2 A2' = -A2/tau12 B2' = -B2/tau22 } NET_RECEIVE(w(uS)) { : the factor c comes from the fact that the synaptic mechanism described in the paper : is using the presynaptic membrane potential continuously to define the differential equation : and in NEURON these synapses are implemented by event based synapses if (S