FNS neural simulator ===== FNS is an event-driven Spiking Neural Network framework, oriented to data-driven brain simulations. FNS combines spiking/synaptic level description with the event-driven approach, allowing the user to define heterogeneous modules and multi-scale connectivity with delayed connections and plastic synapses, providing fast simulations at the same time. FNS is written in JAVA. It comes with the GPLv3 (please see LICENSE). * **Official website** [here](http://www.fnsneuralsimulator.org) * **User guide** [here](https://docs.google.com/document/d/1TJ5vWIBHW81IaySHM5b81JeZehEwZXo8hFj2SIrKnKY/export?format=pdf) (please wait a moment after the click) * **For questions and support**: fnsneuralsimulator@gmail.com Please cite FNS ------------ When using FNS, please cite us as follows: Gianluca Susi, Pilar Garcés, Emanuele Paracone, Alessandro Cristini, Mario Salerno, Fernando Maestú, Ernesto Pereda (2021). "FNS allows efficient event-driven spiking neural network simulations based on a neuron model supporting spike latency. Scientific reports, 11(1), 12160. Laboratory of Cognitive and Computational Neuroscience, UPM-UCM Centre for Biomedical Technology, Complutense and Technical University of Madrid; University of Rome "Tor Vergata". Run using Docker ------------ To run FNS with [Docker](https://docs.docker.com/install/), you can use the public Docker Hub image. Please navigate the terminal until the FNS folder (where you placed the `[SIMULATION_FOLDER]` ) and type the following command (consider the prefix `sudo` for linux privileges): `docker run --rm -v $(pwd)/[SIMULATION_FOLDER]:/usr/local/fns/[SIMULATION_FOLDER] -it -e JAVA_OPTS="" --name fns fnsneuralsimulator/fns-simulator:latest fns [SIMULATION_FOLDER/EXPERIMENT][SWITCHES]` * replace `-it` with `-d` if you prefer to detach and run FNS in the background; * specify the field `JAVA_OPTS` in case you need to modify the heap size. where `[SIMULATION_FOLDER]` is the folder which contains the simulation packages, `[EXPERIMENT]` is the package which contains the set of configuration files for a single simulation, and `.m2` is the directory for your maven repositories. To make sure you are using the latest version of Docker, type: `docker pull fnsneuralsimulator/fns-simulator:latest` Please refer to the [user guide](https://docs.google.com/document/d/1TJ5vWIBHW81IaySHM5b81JeZehEwZXo8hFj2SIrKnKY/export?format=pdf) for additional information. License & Copyright (Version 3.x) ------------------- (c) 2020, Gianluca Susi, Emanuele Paracone, Mario Salerno, Alessandro Cristini, Fernando Maestú. FNS is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. FNS is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with FNS. If not, see .