The code provided models the low-threshold calcium current (IT) in thalamic neurons, specifically following the McCormick and Huguenard model. This current plays a crucial role in generating rhythmic burst firing in thalamic neurons, contributing to processes like sleep and sensory processing.
Calcium Current (IT):
Gating Variables (m and h):
Reversal Potential:
ghk
function) to calculate the driving force on calcium ions, considering both intra- and extracellular concentrations (ci
and co
) and the membrane potential (v
).Temperature Dependence:
qm
and qh
account for temperature-induced variability in the gating kinetics. They adjust variables relative to a baseline temperature of 23.5 degrees Celsius, using Q10 temperature coefficients to relate the speed of channel kinetics to temperature changes.Ion Concentrations:
Calcium Buffers and Removal:
depth
simulates a submembrane space where calcium buffering and clearance occur.drive_channel
represents the net movement of calcium into the cell through the T-type channels, considering the constraints of intracellular calcium homeostasis.T-type calcium channels, and consequently the IT current, are critical in modulating neuronal excitability and rhythmicity. Their activation underlies low-threshold spikes, influencing neuronal signaling and network oscillations relevant to sleep rhythms and sensory signal transmission in the thalamus.
This model specifically captures these dynamic behaviors by mathematically describing the gating of the channels and integrating biophysical principles such as temperature sensitivity and ion concentration gradients.