ModelDB: Models that contain BioPAX (web link to model)

Simulation Environment: BioPAX (web link to model)

A nicotinic acetylcholine receptor kinetic model (Edelstein et al. 1996)

http://www.biopax.org/
The goal of the BioPAX group is to develop a common exchange format for biological pathways data. The BioPAX project began at the Fourth BioPathways Consortium Meeting, a satellite of the ISMB'02 Conference held in Edmonton, Canada in August 2002. It was decided that a pathway exchange format would facilitate sharing of pathway information between databases and users and would be a good first step to building an open source pathway information resource. The project got underway in early October 2002 when Chris Hogue (BIND, UToronto), Peter Karp (BioCyc, SRI), and Chris Sander (MSKCC) organized the BioPAX work group.

Top authors for BioPAX (web link to model):

Edelstein SJ (1)
Schaad O (1)
Henry E (1)
Bertrand D (1)
Changeux JP (1)

Top concepts studied with BioPAX (web link to model):

Ion Channel Kinetics (1)

Top references cited by these models:

Buonomano DV, Merzenich MM. (1995). Temporal information transformed into a spatial code by a neural network with realistic properties. Science (New York, N.Y.). 267 (1)
Hopfield JJ. (1995). Pattern recognition computation using action potential timing for stimulus representation. Nature. 376 (1)
Clements JD, Lester RA, Tong G, Jahr CE, Westbrook GL. (1992). The time course of glutamate in the synaptic cleft. Science (New York, N.Y.). 258 (1)
Kanai Y, Smith CP, Hediger MA. (1993). The elusive transporters with a high affinity for glutamate. Trends in neurosciences. 16 (1)
Bartol TM, Land BR, Salpeter EE, Salpeter MM. (1991). Monte Carlo simulation of miniature endplate current generation in the vertebrate neuromuscular junction. Biophysical journal. 59 (1)