Basak R, Narayanan R. (2018). Active dendrites regulate the spatiotemporal spread of signaling microdomains. PLoS computational biology. 14 [PubMed]

• Active dendrites shape signaling microdomains in hippocampal neurons (Basak & Narayanan 2018) [Model]

Chay A, Zamparo I, Koschinski A, Zaccolo M, Blackwell KT. (2016). Control of ßAR- and N-methyl-D-aspartate (NMDA) Receptor-Dependent cAMP Dynamics in Hippocampal Neurons. PLoS computational biology. 12 [PubMed]

• CA1 pyramidal cell receptor dependent cAMP dynamics (Chay et al. 2016) [Model]

Kim M et al. (2011). Colocalization of protein kinase A with adenylyl cyclase enhances protein kinase A activity during induction of long-lasting long-term-potentiation. PLoS computational biology. 7 [PubMed]

• Hippocampus CA1: Simulations of LTP signaling pathways (Kim M et al. 2011) [Model]

Lindroos R et al. (2018). Basal Ganglia Neuromodulation Over Multiple Temporal and Structural Scales-Simulations of Direct Pathway MSNs Investigate the Fast Onset of Dopaminergic Effects and Predict the Role of Kv4.2. Frontiers in neural circuits. 12 [PubMed]

• Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018) [Model]

Luczak V, Blackwell KT, Abel T, Girault JA, Gervasi N. (2017). Dendritic diameter influences the rate and magnitude of hippocampal cAMP and PKA transients during ß-adrenergic receptor activation. Neurobiology of learning and memory. 138 [PubMed]

• Compartmental differences in cAMP signaling pathways in hippocam. CA1 pyr. cells (Luczak et al 2017) [Model]

Miningou Zobon NT, Jędrzejewska-Szmek J, Blackwell KT. (2021). Temporal pattern and synergy influence activity of ERK signaling pathways during L-LTP induction eLife. 10 [PubMed]

• Dynamics of ERK signaling pathways during L-LTP induction(Miningou et al 2021) [Model]

Oliveira RF, Kim M, Blackwell KT. (2012). Subcellular location of PKA controls striatal plasticity: stochastic simulations in spiny dendrites. PLoS computational biology. 8 [PubMed]

• Dopamine activation of signaling pathways in a medium spiny projection neuron (Oliveira et al. 2012) [Model]