Andrasfalvy BK, Magee JC. (2001). Distance-dependent increase in AMPA receptor number in the dendrites of adult hippocampal CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Bilkey DK, Schwartzkroin PA. (1990). Variation in electrophysiology and morphology of hippocampal CA3 pyramidal cells. Brain research. 514 [PubMed]

Chen K et al. (2001). Persistently modified h-channels after complex febrile seizures convert the seizure-induced enhancement of inhibition to hyperexcitability. Nature medicine. 7 [PubMed]

• Febrile seizure-induced modifications to Ih (Chen et al 2001) [Model]

Chrobak JJ, Buzsáki G. (1998). Gamma oscillations in the entorhinal cortex of the freely behaving rat. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Destexhe A, Paré D. (1999). Impact of network activity on the integrative properties of neocortical pyramidal neurons in vivo. Journal of neurophysiology. 81 [PubMed]

• NN activity impact on neocortical pyr. neurons integrative properties in vivo (Destexhe & Pare 1999) [Model]

Dickson CT, Mena AR, Alonso A. (1997). Electroresponsiveness of medial entorhinal cortex layer III neurons in vitro. Neuroscience. 81 [PubMed]

Eghbal-Ahmadi M et al. (2002). Developmental febrile seizures modulate hippocampal gene expression of hyperpolarization-activated channels in an isoform- and cell-specific manner. J Neurosci. 22

Frank LM, Brown EN, Wilson MA. (2001). A comparison of the firing properties of putative excitatory and inhibitory neurons from CA1 and the entorhinal cortex. Journal of neurophysiology. 86 [PubMed]

Hines ML, Carnevale NT. (1997). The NEURON simulation environment. Neural computation. 9 [PubMed]

Hoffman DA, Magee JC, Colbert CM, Johnston D. (1997). K+ channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons. Nature. 387 [PubMed]

Hô N, Destexhe A. (2000). Synaptic background activity enhances the responsiveness of neocortical pyramidal neurons. Journal of neurophysiology. 84 [PubMed]

Jahr CE, Stevens CF. (1990). A quantitative description of NMDA receptor-channel kinetic behavior. The Journal of neuroscience : the official journal of the Society for Neuroscience. 10 [PubMed]

Jahr CE, Stevens CF. (1990). Voltage dependence of NMDA-activated macroscopic conductances predicted by single-channel kinetics. The Journal of neuroscience : the official journal of the Society for Neuroscience. 10 [PubMed]

Johnston D, Amaral DG. (1998). Hippocampus The Synaptic Organization Of The Brain. 4

Kilner JM, Penny WD, Kiebel SJ, Rugg MD. (2002). Event-related brain dynamics. Trends Neurosci. 25

Lüthi A, McCormick DA. (1999). Modulation of a pacemaker current through Ca(2+)-induced stimulation of cAMP production. Nature neuroscience. 2 [PubMed]

Magee JC. (1998). Dendritic hyperpolarization-activated currents modify the integrative properties of hippocampal CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Magee JC. (1999). Dendritic lh normalizes temporal summation in hippocampal CA1 neurons. Nature neuroscience. 2 [PubMed]

Magee JC, Cook EP. (2000). Somatic EPSP amplitude is independent of synapse location in hippocampal pyramidal neurons. Nature neuroscience. 3 [PubMed]

• CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000) [Model]

Megías M, Emri Z, Freund TF, Gulyás AI. (2001). Total number and distribution of inhibitory and excitatory synapses on hippocampal CA1 pyramidal cells. Neuroscience. 102 [PubMed]

Migliore M. (2003). On the integration of subthreshold inputs from Perforant Path and Schaffer Collaterals in hippocampal CA1 pyramidal neurons. Journal of computational neuroscience. 14 [PubMed]

• CA1 pyramidal neuron: integration of subthreshold inputs from PP and SC (Migliore 2003) [Model]

Migliore M, Hoffman DA, Magee JC, Johnston D. (1999). Role of an A-type K+ conductance in the back-propagation of action potentials in the dendrites of hippocampal pyramidal neurons. Journal of computational neuroscience. 7 [PubMed]

• CA1 pyramidal neuron (Migliore et al 1999) [Model]

Migliore M, Shepherd GM. (2002). Emerging rules for the distributions of active dendritic conductances. Nature reviews. Neuroscience. 3 [PubMed]

• Modulation of temporal integration window (Migliore, Shepherd 2002) [Model]

Poolos NP, Migliore M, Johnston D. (2002). Pharmacological upregulation of h-channels reduces the excitability of pyramidal neuron dendrites. Nature neuroscience. 5 [PubMed]

• CA1 pyramidal neuron: effects of Lamotrigine on dendritic excitability (Poolos et al 2002) [Model]

Sejnowski TJ, Destexhe A, Mainen Z. (1994). An efficient method for computing synaptic conductances based on a kinetic model of receptor binding Neural Comput. 6

• Efficient Method for Computing Synaptic Conductance (Destexhe et al 1994) [Model]
• Application of a common kinetic formalism for synaptic models (Destexhe et al 1994) [Model]
• Kinetic synaptic models applicable to building networks (Destexhe et al 1998) [Model]

Spruston N, Schiller Y, Stuart G, Sakmann B. (1995). Activity-dependent action potential invasion and calcium influx into hippocampal CA1 dendrites. Science (New York, N.Y.). 268 [PubMed]

Stricker C, Field AC, Redman SJ. (1996). Statistical analysis of amplitude fluctuations in EPSCs evoked in rat CA1 pyramidal neurones in vitro. The Journal of physiology. 490 ( Pt 2) [PubMed]

Suzuki SS, Smith GK. (1985). Burst characteristics of hippocampal complex spike cells in the awake rat. Experimental neurology. 89 [PubMed]

Traub RD, Whittington MA, Colling SB, Buzsáki G, Jefferys JG. (1996). Analysis of gamma rhythms in the rat hippocampus in vitro and in vivo. The Journal of physiology. 493 ( Pt 2) [PubMed]

Vargas G, Lucero MT. (2002). Modulation by PKA of the hyperpolarization-activated current (Ih) in cultured rat olfactory receptor neurons. The Journal of membrane biology. 188 [PubMed]

Vasilyev DV, Barish ME. (2002). Postnatal development of the hyperpolarization-activated excitatory current Ih in mouse hippocampal pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

Watanabe S, Hoffman DA, Migliore M, Johnston D. (2002). Dendritic K+ channels contribute to spike-timing dependent long-term potentiation in hippocampal pyramidal neurons. Proceedings of the National Academy of Sciences of the United States of America. 99 [PubMed]

• CA1 pyramidal neuron: conditional boosting of dendritic APs (Watanabe et al 2002) [Model]

Williams SR, Stuart GJ. (2000). Site independence of EPSP time course is mediated by dendritic I(h) in neocortical pyramidal neurons. Journal of neurophysiology. 83 [PubMed]

Allken V, Chepkoech JL, Einevoll GT, Halnes G. (2014). The subcellular distribution of T-type Ca2+ channels in interneurons of the lateral geniculate nucleus. PloS one. 9 [PubMed]

• The subcellular distribution of T-type Ca2+ channels in LGN interneurons (Allken et al. 2014) [Model]

Avella Gonzalez OJ, Mansvelder HD, van Pelt J, van Ooyen A. (2015). H-Channels Affect Frequency, Power and Amplitude Fluctuations of Neuronal Network Oscillations. Frontiers in computational neuroscience. 9 [PubMed]

• H-currents effect on the fluctuation of gamma/beta oscillations (Avella-Gonzalez et al., 2015) [Model]

Azouz R, Gray CM. (2008). Stimulus-selective spiking is driven by the relative timing of synchronous excitation and disinhibition in cat striate neurons in vivo. The European journal of neuroscience. 28 [PubMed]

Berzhanskaya J, Chernyy N, Gluckman BJ, Schiff SJ, Ascoli GA. (2013). Modulation of hippocampal rhythms by subthreshold electric fields and network topology. Journal of computational neuroscience. 34 [PubMed]

• Modulation of hippocampal rhythms by electric fields and network topology (Berzhanskaya et al. 2013) [Model]

Booth V, Poe GR. (2006). Input source and strength influences overall firing phase of model hippocampal CA1 pyramidal cells during theta: relevance to REM sleep reactivation and memory consolidation. Hippocampus. 16 [PubMed]

Dewell RB, Gabbiani F. (2019). Active membrane conductances and morphology of a collision detection neuron broaden its impedance profile and improve discrimination of input synchrony. Journal of neurophysiology. 122 [PubMed]

• LGMD impedance (Dewell & Gabbiani 2019) [Model]

Ermentrout GB, Terman DH. (2010). Mathematical Foundations of Neuroscience Interdisciplinary Applied Mathematics. 35

• Mathematical Foundations of Neuroscience (Ermentrout and Terman 2010) [Model]

Ferrante M, Ascoli GA. (2015). Distinct and synergistic feedforward inhibition of pyramidal cells by basket and bistratified interneurons. Frontiers in cellular neuroscience. 9 [PubMed]

• Feedforward inhibition in pyramidal cells (Ferrante & Ascoli 2015) [Model]

Ferrante M, Blackwell KT, Migliore M, Ascoli GA. (2008). Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets. Current medicinal chemistry. 15 [PubMed]

• Computational neuropharmacology of CA1 pyramidal neuron (Ferrante et al. 2008) [Model]

Ferrante M, Migliore M, Ascoli GA. (2013). Functional impact of dendritic branch-point morphology. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

• Functional impact of dendritic branch point morphology (Ferrante et al., 2013) [Model]

Gabbiani F, Krapp HG. (2006). Spike-frequency adaptation and intrinsic properties of an identified, looming-sensitive neuron. Journal of neurophysiology. 96 [PubMed]

• Leaky integrate-and-fire model of spike frequency adaptation in the LGMD (Gabbiani and Krapp 2006) [Model]

Gasparini S, Migliore M, Magee JC. (2004). On the initiation and propagation of dendritic spikes in CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

• CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004) [Model]

Hemond P, Migliore M, Ascoli GA, Jaffe DB. (2009). The membrane response of hippocampal CA3b pyramidal neurons near rest: Heterogeneity of passive properties and the contribution of hyperpolarization-activated currents. Neuroscience. 160 [PubMed]

• Ca3 pyramidal neuron: membrane response near rest (Hemond et al. 2009) [Model]

Hossain WA, Antic SD, Yang Y, Rasband MN, Morest DK. (2005). Where is the spike generator of the cochlear nerve? Voltage-gated sodium channels in the mouse cochlea. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

• AP initiation and propagation in type II cochlear ganglion cell (Hossain et al 2005) [Model]

Li X, Ascoli GA. (2006). Computational simulation of the input-output relationship in hippocampal pyramidal cells. Journal of computational neuroscience. 21 [PubMed]

• CA1 pyramidal neuron synaptic integration (Li and Ascoli 2006, 2008) [Model]

Migliore M, Ferrante M, Ascoli GA. (2005). Signal propagation in oblique dendrites of CA1 pyramidal cells. Journal of neurophysiology. 94 [PubMed]

• CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005) [Model]

Mäki-Marttunen T, Mäki-Marttunen V. (2022). Excitatory and inhibitory effects of HCN channel modulation on excitability of layer V pyramidal cells PLoS computational biology. 18 [PubMed]

• Simulations of modulation of HCN channels in L5PCs (Mäki-Marttunen and Mäki-Marttunen, 2022) [Model]

Neymotin SA, Dura-Bernal S, Lakatos P, Sanger TD, Lytton WW. (2016). Multitarget Multiscale Simulation for Pharmacological Treatment of Dystonia in Motor Cortex. Frontiers in pharmacology. 7 [PubMed]

• Multitarget pharmacology for Dystonia in M1 (Neymotin et al 2016) [Model]

Neymotin SA et al. (2013). Ih tunes theta/gamma oscillations and cross-frequency coupling in an in silico CA3 model. PloS one. 8 [PubMed]

• Ih tunes oscillations in an In Silico CA3 model (Neymotin et al. 2013) [Model]

Neymotin SA et al. (2016). Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex. Neuroscience. 316 [PubMed]

• Ca+/HCN channel-dependent persistent activity in multiscale model of neocortex (Neymotin et al 2016) [Model]

Schulz JM, Knoflach F, Hernandez MC, Bischofberger J. (2018). Dendrite-targeting interneurons control synaptic NMDA-receptor activation via nonlinear a5-GABAA receptors. Nature communications. 9 [PubMed]

• CA1 pyramidal neuron: nonlinear a5-GABAAR controls synaptic NMDAR activation (Schulz et al 2018) [Model]
• Single compartment: nonlinear a5-GABAAR controls synaptic NMDAR activation (Schulz et al 2018) [Model]

Szalisznyó K. (2006). Role of hyperpolarization-activated conductances in the lateral superior olive: a modeling study. Journal of computational neuroscience. 20 [PubMed]

Zeldenrust F, Chameau PJ, Wadman WJ. (2013). Reliability of spike and burst firing in thalamocortical relay cells. Journal of computational neuroscience. 35 [PubMed]

• Reliability of Morris-Lecar neurons with added T, h, and AHP currents (Zeldenrust et al. 2013) [Model]

van Welie I, Remme MW, van Hooft JA, Wadman WJ. (2006). Different levels of Ih determine distinct temporal integration in bursting and regular-spiking neurons in rat subiculum. The Journal of physiology. 576 [PubMed]

• Ih levels roles in bursting and regular-spiking subiculum pyramidal neurons (van Welie et al 2006) [Model]