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Damodaran S, Cressman JR, Jedrzejewski-Szmek Z, Blackwell KT. (2015). Desynchronization of fast-spiking interneurons reduces ß-band oscillations and imbalance in firing in the dopamine-depleted striatum. The Journal of neuroscience : the official journal of the Society for Neuroscience. 35 [PubMed]

• Striatal NN model of MSNs and FSIs investigated effects of dopamine depletion (Damodaran et al 2015) [Model]

Edgerton JR, Jaeger D. (2011). Dendritic sodium channels promote active decorrelation and reduce phase locking to parkinsonian input oscillations in model globus pallidus neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

• Globus pallidus neuron models with differing dendritic Na channel expression (Edgerton et al., 2010) [Model]

Fountas Z, Shanahan M. (2017). The role of cortical oscillations in a spiking neural network model of the basal ganglia. PloS one. 12 [PubMed]

• Cortical oscillations and the basal ganglia (Fountas & Shanahan 2017) [Model]

Frank MJ. (2006). Hold your horses: a dynamic computational role for the subthalamic nucleus in decision making. Neural networks : the official journal of the International Neural Network Society. 19 [PubMed]

• Roles of subthalamic nucleus and DBS in reinforcement conflict-based decision making (Frank 2006) [Model]

Frank MJ, Scheres A, Sherman SJ. (2007). Understanding decision-making deficits in neurological conditions: insights from models of natural action selection. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 362 [PubMed]

Gillies A, Willshaw D. (2004). Models of the subthalamic nucleus. The importance of intranuclear connectivity. Medical engineering & physics. 26 [PubMed]

Gillies A, Willshaw D. (2006). Membrane channel interactions underlying rat subthalamic projection neuron rhythmic and bursting activity. Journal of neurophysiology. 95 [PubMed]

• Rat subthalamic projection neuron (Gillies and Willshaw 2006) [Model]

Günay C, Edgerton JR, Jaeger D. (2008). Channel density distributions explain spiking variability in the globus pallidus: a combined physiology and computer simulation database approach. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

• Globus pallidus multi-compartmental model neuron with realistic morphology (Gunay et al. 2008) [Model]

Hadipour Niktarash A. (2003). Transmission of the subthalamic nucleus oscillatory activity to the cortex: a computational approach. Journal of computational neuroscience. 15 [PubMed]

Hadipour-Niktarash A. (2006). A computational model of how an interaction between the thalamocortical and thalamic reticular neurons transforms the low-frequency oscillations of the globus pallidus. Journal of computational neuroscience. 20 [PubMed]

• Thalamic transformation of pallidal input (Hadipour-Niktarash 2006) [Model]

Hahn PJ, McIntyre CC. (2010). Modeling shifts in the rate and pattern of subthalamopallidal network activity during deep brain stimulation. Journal of computational neuroscience. 28 [PubMed]

• Basal ganglia network model of subthalamic deep brain stimulation (Hahn and McIntyre 2010) [Model]

Kumaravelu K, Brocker DT, Grill WM. (2016). A biophysical model of the cortex-basal ganglia-thalamus network in the 6-OHDA lesioned rat model of Parkinson's disease. Journal of computational neuroscience. 40 [PubMed]

• Cortex-Basal Ganglia-Thalamus network model (Kumaravelu et al. 2016) [Model]

Kumaravelu K, Oza CS, Behrend CE, Grill WM. (2018). Model-based deconstruction of cortical evoked potentials generated by subthalamic nucleus deep brain stimulation. Journal of neurophysiology. 120 [PubMed]

• Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018) [Model]

Leblois A, Boraud T, Meissner W, Bergman H, Hansel D. (2006). Competition between feedback loops underlies normal and pathological dynamics in the basal ganglia. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

• A dynamical model of the basal ganglia (Leblois et al 2006) [Model]

Liénard J, Girard B. (2014). A biologically constrained model of the whole basal ganglia addressing the paradoxes of connections and selection. Journal of computational neuroscience. 36 [PubMed]

• Biologically Constrained Basal Ganglia model (BCBG model) (Lienard, Girard 2014) [Model]

Muddapu VR, Mandali A, Chakravarthy VS, Ramaswamy S. (2019). A Computational Model of Loss of Dopaminergic Cells in Parkinson's Disease Due to Glutamate-Induced Excitotoxicity. Frontiers in neural circuits. 13 [PubMed]

• Excitotoxic loss of dopaminergic cells in PD (Muddapu et al 2019) [Model]

Mulcahy G, Atwood B, Kuznetsov A. (2020). Basal ganglia role in learning rewarded actions and executing previously learned choices: Healthy and diseased states. PloS one. 15 [PubMed]

• Cortico - Basal Ganglia Loop (Mulcahy et al 2020) [Model]

Rubin JE, Terman D. (2004). High frequency stimulation of the subthalamic nucleus eliminates pathological thalamic rhythmicity in a computational model. Journal of computational neuroscience. 16 [PubMed]

• Optimal deep brain stimulation of the subthalamic nucleus-a computational study (Feng et al. 2007) [Model]
• High frequency stimulation of the Subthalamic Nucleus (Rubin and Terman 2004) [Model]

Schultheiss NW, Edgerton JR, Jaeger D. (2010). Phase response curve analysis of a full morphological globus pallidus neuron model reveals distinct perisomatic and dendritic modes of synaptic integration. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

• GP Neuron, somatic and dendritic phase response curves (Schultheiss et al. 2011) [Model]

So RQ, Kent AR, Grill WM. (2012). Relative contributions of local cell and passing fiber activation and silencing to changes in thalamic fidelity during deep brain stimulation and lesioning: a computational modeling study. Journal of computational neuroscience. 32 [PubMed]

• Basal ganglia-thalamic network model for deep brain stimulation (So et al. 2012) [Model]

Terman D, Rubin JE, Yew AC, Wilson CJ. (2002). Activity patterns in a model for the subthalamopallidal network of the basal ganglia. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

• Optimal deep brain stimulation of the subthalamic nucleus-a computational study (Feng et al. 2007) [Model]
• Activity patterns in a subthalamopallidal network of the basal ganglia model (Terman et al 2002) [Model]

Yousif N, Bain PG, Nandi D, Borisyuk R. (2020). A Population Model of Deep Brain Stimulation in Movement Disorders From Circuits to Cells. Frontiers in human neuroscience. 14 [PubMed]

• Network model of movement disorders (Yousif et al 2020) [Model]