Antunes G, Simoes-de-Souza FM. (2018). AMPA receptor trafficking and its role in heterosynaptic plasticity. Scientific reports. 8 [PubMed]

See more from authors: Antunes G · Simoes-de-Souza FM

References and models cited by this paper

Abbott LF, Nelson SB. (2000). Synaptic plasticity: taming the beast. Nature neuroscience. 3 Suppl [PubMed]

Adesnik H, Nicoll RA, England PM. (2005). Photoinactivation of native AMPA receptors reveals their real-time trafficking. Neuron. 48 [PubMed]

Anggono V, Huganir RL. (2012). Regulation of AMPA receptor trafficking and synaptic plasticity. Current opinion in neurobiology. 22 [PubMed]

Antunes G, Roque AC, Simoes de Souza FM. (2016). Modelling intracellular competition for calcium: kinetic and thermodynamic control of different molecular modes of signal decoding. Scientific reports. 6 [PubMed]

Antunes G, Roque AC, Simoes-de-Souza FM. (2016). Stochastic Induction of Long-Term Potentiation and Long-Term Depression. Scientific reports. 6 [PubMed]

Antunes G, Roque AC, Simoes-de-Souza FM. (2018). Molecular mechanisms of detection and discrimination of dynamic signals. Scientific reports. 8 [PubMed]

Bartol TM, Stiles JR. (2001). Monte Carlo methods for simulating realistic synaptic microphysiology using MCell Computational Neuroscience: Realistic Modelling for Experimentalists.

Bats C, Groc L, Choquet D. (2007). The interaction between Stargazin and PSD-95 regulates AMPA receptor surface trafficking. Neuron. 53 [PubMed]

Borgdorff AJ, Choquet D. (2002). Regulation of AMPA receptor lateral movements. Nature. 417 [PubMed]

Bourne J, Harris KM. (2007). Do thin spines learn to be mushroom spines that remember? Current opinion in neurobiology. 17 [PubMed]

Cheng D et al. (2006). Relative and absolute quantification of postsynaptic density proteome isolated from rat forebrain and cerebellum. Molecular & cellular proteomics : MCP. 5 [PubMed]

Coultrap SJ et al. (2014). Autonomous CaMKII mediates both LTP and LTD using a mechanism for differential substrate site selection. Cell reports. 6 [PubMed]

Czöndör K et al. (2012). Unified quantitative model of AMPA receptor trafficking at synapses. Proceedings of the National Academy of Sciences of the United States of America. 109 [PubMed]

Diering GH, Heo S, Hussain NK, Liu B, Huganir RL. (2016). Extensive phosphorylation of AMPA receptors in neurons. Proceedings of the National Academy of Sciences of the United States of America. 113 [PubMed]

Earnshaw BA, Bressloff PC. (2006). Biophysical model of AMPA receptor trafficking and its regulation during long-term potentiation/long-term depression. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Harris KM, Stevens JK. (1989). Dendritic spines of CA 1 pyramidal cells in the rat hippocampus: serial electron microscopy with reference to their biophysical characteristics. The Journal of neuroscience : the official journal of the Society for Neuroscience. 9 [PubMed]

Harvey CD, Svoboda K. (2007). Locally dynamic synaptic learning rules in pyramidal neuron dendrites. Nature. 450 [PubMed]

Harvey CD, Yasuda R, Zhong H, Svoboda K. (2008). The spread of Ras activity triggered by activation of a single dendritic spine. Science (New York, N.Y.). 321 [PubMed]

Kastellakis G, Cai DJ, Mednick SC, Silva AJ, Poirazi P. (2015). Synaptic clustering within dendrites: an emerging theory of memory formation. Progress in neurobiology. 126 [PubMed]

Kerr RA et al. (2008). FAST MONTE CARLO SIMULATION METHODS FOR BIOLOGICAL REACTION-DIFFUSION SYSTEMS IN SOLUTION AND ON SURFACES. SIAM journal on scientific computing : a publication of the Society for Industrial and Applied Mathematics. 30 [PubMed]

Kotaleski JH, Blackwell KT. (2010). Modelling the molecular mechanisms of synaptic plasticity using systems biology approaches. Nature reviews. Neuroscience. 11 [PubMed]

Kusters R, Kapitein LC, Hoogenraad CC, Storm C. (2013). Shape-induced asymmetric diffusion in dendritic spines allows efficient synaptic AMPA receptor trapping. Biophysical journal. 105 [PubMed]

Legenstein R, Maass W. (2011). Branch-specific plasticity enables self-organization of nonlinear computation in single neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

Lisman JE, Zhabotinsky AM. (2001). A model of synaptic memory: a CaMKII/PP1 switch that potentiates transmission by organizing an AMPA receptor anchoring assembly. Neuron. 31 [PubMed]

Lüscher C, Malenka RC. (2012). NMDA receptor-dependent long-term potentiation and long-term depression (LTP/LTD). Cold Spring Harbor perspectives in biology. 4 [PubMed]

Makino H, Malinow R. (2009). AMPA receptor incorporation into synapses during LTP: the role of lateral movement and exocytosis. Neuron. 64 [PubMed]

Makino H, Malinow R. (2011). Compartmentalized versus global synaptic plasticity on dendrites controlled by experience. Neuron. 72 [PubMed]

Matsuzaki M, Honkura N, Ellis-Davies GC, Kasai H. (2004). Structural basis of long-term potentiation in single dendritic spines. Nature. 429 [PubMed]

Nishiyama J, Yasuda R. (2015). Biochemical Computation for Spine Structural Plasticity. Neuron. 87 [PubMed]

Oh WC, Parajuli LK, Zito K. (2015). Heterosynaptic structural plasticity on local dendritic segments of hippocampal CA1 neurons. Cell reports. 10 [PubMed]

Opazo P et al. (2010). CaMKII triggers the diffusional trapping of surface AMPARs through phosphorylation of stargazin. Neuron. 67 [PubMed]

Park J et al. (2016). CaMKII Phosphorylation of TARP?-8 Is a Mediator of LTP and Learning and Memory. Neuron. 92 [PubMed]

Passafaro M, Piëch V, Sheng M. (2001). Subunit-specific temporal and spatial patterns of AMPA receptor exocytosis in hippocampal neurons. Nature neuroscience. 4 [PubMed]

Patterson MA, Szatmari EM, Yasuda R. (2010). AMPA receptors are exocytosed in stimulated spines and adjacent dendrites in a Ras-ERK-dependent manner during long-term potentiation. Proceedings of the National Academy of Sciences of the United States of America. 107 [PubMed]

Poirazi P, Mel BW. (2001). Impact of active dendrites and structural plasticity on the memory capacity of neural tissue. Neuron. 29 [PubMed]

Rabinowitch I, Segev I. (2008). Two opposing plasticity mechanisms pulling a single synapse. Trends in neurosciences. 31 [PubMed]

Raghavachari S, Lisman JE. (2004). Properties of quantal transmission at CA1 synapses. Journal of neurophysiology. 92 [PubMed]

Santamaria F, Gonzalez J, Augustine GJ, Raghavachari S. (2010). Quantifying the effects of elastic collisions and non-covalent binding on glutamate receptor trafficking in the post-synaptic density. PLoS computational biology. 6 [PubMed]

Scanziani M, Nicoll RA, Malenka RC. (1996). Heterosynaptic long-term depression in the hippocampus. Journal of physiology, Paris. 90 [PubMed]

Seeliger C, Le Novère N. (2015). Enabling surface dependent diffusion in spatial simulations using Smoldyn. BMC research notes. 8 [PubMed]

Smolen P, Baxter DA, Byrne JH. (2006). A model of the roles of essential kinases in the induction and expression of late long-term potentiation. Biophysical journal. 90 [PubMed]

Smolen P, Baxter DA, Byrne JH. (2012). Molecular constraints on synaptic tagging and maintenance of long-term potentiation: a predictive model. PLoS computational biology. 8 [PubMed]

Sossin WS. (2018). Memory Synapses Are Defined by Distinct Molecular Complexes: A Proposal. Frontiers in synaptic neuroscience. 10 [PubMed]

Stiles JR, Van Helden D, Bartol TM, Salpeter EE, Salpeter MM. (1996). Miniature endplate current rise times less than 100 microseconds from improved dual recordings can be modeled with passive acetylcholine diffusion from a synaptic vesicle. Proceedings of the National Academy of Sciences of the United States of America. 93 [PubMed]

Tang S, Yasuda R. (2017). Imaging ERK and PKA Activation in Single Dendritic Spines during Structural Plasticity. Neuron. 93 [PubMed]

Tao-Cheng JH et al. (2011). Trafficking of AMPA receptors at plasma membranes of hippocampal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

Turrigiano GG, Leslie KR, Desai NS, Rutherford LC, Nelson SB. (1998). Activity-dependent scaling of quantal amplitude in neocortical neurons. Nature. 391 [PubMed]

Volgushev M et al. (2016). Partial Breakdown of Input Specificity of STDP at Individual Synapses Promotes New Learning. The Journal of neuroscience : the official journal of the Society for Neuroscience. 36 [PubMed]

Zenke F, Agnes EJ, Gerstner W. (2015). Diverse synaptic plasticity mechanisms orchestrated to form and retrieve memories in spiking neural networks. Nature communications. 6 [PubMed]

Zenke F, Gerstner W. (2017). Hebbian plasticity requires compensatory processes on multiple timescales. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 372 [PubMed]

References and models that cite this paper
This website requires cookies and limited processing of your personal data in order to function. By continuing to browse or otherwise use this site, you are agreeing to this use. See our Privacy policy and how to cite and terms of use.