L4 cortical barrel NN model receiving thalamic input during whisking or touch (Gutnisky et al. 2017)


Golomb D et al. (2017). Mechanisms underlying a thalamocortical transformation during active tactile sensation PLoS Comput Biol. 13(6)

See more from authors: Golomb D · Svoboda K · Yu J · Bale M · Hires SA · Gutnisky DA · To MS

References and models cited by this paper

Agmon A, Connors BW. (1991). Thalamocortical responses of mouse somatosensory (barrel) cortex in vitro. Neuroscience. 41 [PubMed]

Ahmadian Y, Rubin DB, Miller KD. (2013). Analysis of the stabilized supralinear network. Neural computation. 25 [PubMed]

Alfonsa H et al. (2015). The contribution of raised intraneuronal chloride to epileptic network activity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 35 [PubMed]

Beierlein M, Gibson JR, Connors BW. (2003). Two dynamically distinct inhibitory networks in layer 4 of the neocortex. Journal of neurophysiology. 90 [PubMed]

Birdwell JA et al. (2007). Biomechanical models for radial distance determination by the rat vibrissal system. Journal of neurophysiology. 98 [PubMed]

Brecht M, Sakmann B. (2002). Dynamic representation of whisker deflection by synaptic potentials in spiny stellate and pyramidal cells in the barrels and septa of layer 4 rat somatosensory cortex. The Journal of physiology. 543 [PubMed]

Brecht M, Sakmann B. (2002). Whisker maps of neuronal subclasses of the rat ventral posterior medial thalamus, identified by whole-cell voltage recording and morphological reconstruction. The Journal of physiology. 538 [PubMed]

Bruno RM. (2011). Synchrony in sensation. Current opinion in neurobiology. 21 [PubMed]

Bruno RM, Sakmann B. (2006). Cortex is driven by weak but synchronously active thalamocortical synapses. Science (New York, N.Y.). 312 [PubMed]

Bruno RM, Simons DJ. (2002). Feedforward mechanisms of excitatory and inhibitory cortical receptive fields. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

Bureau I, von Saint Paul F, Svoboda K. (2006). Interdigitated paralemniscal and lemniscal pathways in the mouse barrel cortex. PLoS biology. 4 [PubMed]

Chapman CE. (1994). Active versus passive touch: factors influencing the transmission of somatosensory signals to primary somatosensory cortex. Canadian journal of physiology and pharmacology. 72 [PubMed]

Clack NG et al. (2012). Automated tracking of whiskers in videos of head fixed rodents. PLoS computational biology. 8 [PubMed]

Cossell L et al. (2015). Functional organization of excitatory synaptic strength in primary visual cortex. Nature. 518 [PubMed]

Cruikshank SJ, Lewis TJ, Connors BW. (2007). Synaptic basis for intense thalamocortical activation of feedforward inhibitory cells in neocortex. Nature neuroscience. 10 [PubMed]

Curtis JC, Kleinfeld D. (2009). Phase-to-rate transformations encode touch in cortical neurons of a scanning sensorimotor system. Nature neuroscience. 12 [PubMed]

DeWeese MR, Wehr M, Zador AM. (2003). Binary spiking in auditory cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Diamond ME, von Heimendahl M, Knutsen PM, Kleinfeld D, Ahissar E. (2008). 'Where' and 'what' in the whisker sensorimotor system. Nature reviews. Neuroscience. 9 [PubMed]

Eliasmith C, Trujillo O. (2014). The use and abuse of large-scale brain models. Current opinion in neurobiology. 25 [PubMed]

Fanselow EE, Sameshima K, Baccala LA, Nicolelis MA. (2001). Thalamic bursting in rats during different awake behavioral states. Proceedings of the National Academy of Sciences of the United States of America. 98 [PubMed]

Fee MS, Mitra PP, Kleinfeld D. (1997). Central versus peripheral determinants of patterned spike activity in rat vibrissa cortex during whisking. Journal of neurophysiology. 78 [PubMed]

Feldmeyer D, Roth A, Sakmann B. (2005). Monosynaptic connections between pairs of spiny stellate cells in layer 4 and pyramidal cells in layer 5A indicate that lemniscal and paralemniscal afferent pathways converge in the infragranular somatosensory cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Ferster D, Chung S, Wheat H. (1996). Orientation selectivity of thalamic input to simple cells of cat visual cortex. Nature. 380 [PubMed]

Fujita M. (1982). Adaptive filter model of the cerebellum. Biological cybernetics. 45 [PubMed]

GIBLIN DR. (1964). SOMATOSENSORY EVOKED POTENTIALS IN HEALTHY SUBJECTS AND IN PATIENTS WITH LESIONS OF THE NERVOUS SYSTEM. Annals of the New York Academy of Sciences. 112 [PubMed]

GIBSON JJ. (1962). Observations on active touch. Psychological review. 69 [PubMed]

Gabernet L, Jadhav SP, Feldman DE, Carandini M, Scanziani M. (2005). Somatosensory integration controlled by dynamic thalamocortical feed-forward inhibition. Neuron. 48 [PubMed]

Golomb D, Hansel D. (2000). The number of synaptic inputs and the synchrony of large, sparse neuronal networks. Neural computation. 12 [PubMed]

Golomb D, Kleinfeld D, Reid RC, Shapley RM, Shraiman BI. (1994). On temporal codes and the spatiotemporal response of neurons in the lateral geniculate nucleus. Journal of neurophysiology. 72 [PubMed]

HUBEL DH, WIESEL TN. (1962). Receptive fields, binocular interaction and functional architecture in the cat's visual cortex. The Journal of physiology. 160 [PubMed]

Han X, Boyden ES. (2007). Multiple-color optical activation, silencing, and desynchronization of neural activity, with single-spike temporal resolution. PloS one. 2 [PubMed]

Hansel D, Mato G. (2013). Short-term plasticity explains irregular persistent activity in working memory tasks. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

Hansel D, van Vreeswijk C. (2012). The mechanism of orientation selectivity in primary visual cortex without a functional map. The Journal of neuroscience : the official journal of the Society for Neuroscience. 32 [PubMed]

Hayut I, Fanselow EE, Connors BW, Golomb D. (2011). LTS and FS inhibitory interneurons, short-term synaptic plasticity, and cortical circuit dynamics. PLoS computational biology. 7 [PubMed]

Hires SA, Gutnisky DA, Yu J, O'Connor DH, Svoboda K. (2015). Low-noise encoding of active touch by layer 4 in the somatosensory cortex. eLife. 4 [PubMed]

Hooks BM et al. (2011). Laminar analysis of excitatory local circuits in vibrissal motor and sensory cortical areas. PLoS biology. 9 [PubMed]

Huber D et al. (2008). Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice. Nature. 451 [PubMed]

Hull C, Isaacson JS, Scanziani M. (2009). Postsynaptic mechanisms govern the differential excitation of cortical neurons by thalamic inputs. The Journal of neuroscience : the official journal of the Society for Neuroscience. 29 [PubMed]

Hulliger M, Nordh E, Thelin AE, Vallbo AB. (1979). The responses of afferent fibres from the glabrous skin of the hand during voluntary finger movements in man. The Journal of physiology. 291 [PubMed]

Jiang X et al. (2015). Principles of connectivity among morphologically defined cell types in adult neocortex. Science (New York, N.Y.). 350 [PubMed]

Khatri V, Bermejo R, Brumberg JC, Zeigler HP. (2010). Whisking in air: encoding of kinematics by VPM neurons in awake rats. Somatosensory & motor research. 27 [PubMed]

Kinnischtzke AK, Simons DJ, Fanselow EE. (2014). Motor cortex broadly engages excitatory and inhibitory neurons in somatosensory barrel cortex. Cerebral cortex (New York, N.Y. : 1991). 24 [PubMed]

Kleinfeld D, Sachdev RN, Merchant LM, Jarvis MR, Ebner FF. (2002). Adaptive filtering of vibrissa input in motor cortex of rat. Neuron. 34 [PubMed]

Knutsen PM, Pietr M, Ahissar E. (2006). Haptic object localization in the vibrissal system: behavior and performance. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Kremkow J, Perrinet LU, Masson GS, Aertsen A. (2010). Functional consequences of correlated excitatory and inhibitory conductances in cortical networks. Journal of computational neuroscience. 28 [PubMed]

Kwegyir-Afful EE, Kyriazi HT, Simons DJ. (2013). Weaker feedforward inhibition accounts for less pronounced thalamocortical response transformation in mouse vs. rat barrels. Journal of neurophysiology. 110 [PubMed]

Lefort S, Tomm C, Floyd Sarria JC, Petersen CC. (2009). The excitatory neuronal network of the C2 barrel column in mouse primary somatosensory cortex. Neuron. 61 [PubMed]

Lerchner A, Sterner G, Hertz J, Ahmadi M. (2006). Mean field theory for a balanced hypercolumn model of orientation selectivity in primary visual cortex. Network (Bristol, England). 17 [PubMed]

Ma Y, Hu H, Agmon A. (2012). Short-term plasticity of unitary inhibitory-to-inhibitory synapses depends on the presynaptic interneuron subtype. The Journal of neuroscience : the official journal of the Society for Neuroscience. 32 [PubMed]

Ma Y, Hu H, Berrebi AS, Mathers PH, Agmon A. (2006). Distinct subtypes of somatostatin-containing neocortical interneurons revealed in transgenic mice. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Marder E, Goaillard JM. (2006). Variability, compensation and homeostasis in neuron and network function. Nature reviews. Neuroscience. 7 [PubMed]

Markram H et al. (2015). Reconstruction and Simulation of Neocortical Microcircuitry. Cell. 163 [PubMed]

Moore JD, Mercer Lindsay N, Deschênes M, Kleinfeld D. (2015). Vibrissa Self-Motion and Touch Are Reliably Encoded along the Same Somatosensory Pathway from Brainstem through Thalamus. PLoS biology. 13 [PubMed]

O'Connor DH et al. (2010). Vibrissa-based object localization in head-fixed mice. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

O'Connor DH et al. (2013). Neural coding during active somatosensation revealed using illusory touch. Nature neuroscience. 16 [PubMed]

O'Connor DH, Peron SP, Huber D, Svoboda K. (2010). Neural activity in barrel cortex underlying vibrissa-based object localization in mice. Neuron. 67 [PubMed]

Oh SW et al. (2014). A mesoscale connectome of the mouse brain. Nature. 508 [PubMed]

Ozeki H, Finn IM, Schaffer ES, Miller KD, Ferster D. (2009). Inhibitory stabilization of the cortical network underlies visual surround suppression. Neuron. 62 [PubMed]

Pammer L et al. (2013). The mechanical variables underlying object localization along the axis of the whisker. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

Papakostopoulos D, Cooper R, Crow HJ. (1975). Inhibition of cortical evoked potentials and sensation by self-initiated movement in man. Nature. 258 [PubMed]

Pehlevan C, Sompolinsky H. (2014). Selectivity and sparseness in randomly connected balanced networks. PloS one. 9 [PubMed]

Persi E, Hansel D, Nowak L, Barone P, van Vreeswijk C. (2011). Power-law input-output transfer functions explain the contrast-response and tuning properties of neurons in visual cortex. PLoS computational biology. 7 [PubMed]

Petreanu L, Huber D, Sobczyk A, Svoboda K. (2007). Channelrhodopsin-2-assisted circuit mapping of long-range callosal projections. Nature neuroscience. 10 [PubMed]

Petreanu L, Mao T, Sternson SM, Svoboda K. (2009). The subcellular organization of neocortical excitatory connections. Nature. 457 [PubMed]

Pinto DJ, Brumberg JC, Simons DJ. (2000). Circuit dynamics and coding strategies in rodent somatosensory cortex. Journal of neurophysiology. 83 [PubMed]

Pinto DJ, Hartings JA, Brumberg JC, Simons DJ. (2003). Cortical damping: analysis of thalamocortical response transformations in rodent barrel cortex. Cerebral cortex (New York, N.Y. : 1991). 13 [PubMed]

Porter JT, Johnson CK, Agmon A. (2001). Diverse types of interneurons generate thalamus-evoked feedforward inhibition in the mouse barrel cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Poulet JF, Fernandez LM, Crochet S, Petersen CC. (2012). Thalamic control of cortical states. Nature neuroscience. 15 [PubMed]

Raimondo JV, Kay L, Ellender TJ, Akerman CJ. (2012). Optogenetic silencing strategies differ in their effects on inhibitory synaptic transmission. Nature neuroscience. 15 [PubMed]

Reid RC, Alonso JM. (1995). Specificity of monosynaptic connections from thalamus to visual cortex. Nature. 378 [PubMed]

Reinhold K, Lien AD, Scanziani M. (2015). Distinct recurrent versus afferent dynamics in cortical visual processing. Nature neuroscience. 18 [PubMed]

Reyes AD. (2003). Synchrony-dependent propagation of firing rate in iteratively constructed networks in vitro. Nature neuroscience. 6 [PubMed]

Rubin DB, Van Hooser SD, Miller KD. (2015). The stabilized supralinear network: a unifying circuit motif underlying multi-input integration in sensory cortex. Neuron. 85 [PubMed]

Shriki O, Hansel D, Sompolinsky H. (2003). Rate models for conductance-based cortical neuronal networks. Neural computation. 15 [PubMed]

Simons DJ, Carvell GE. (1989). Thalamocortical response transformation in the rat vibrissa/barrel system. Journal of neurophysiology. 61 [PubMed]

Sofroniew NJ, Svoboda K. (2015). Whisking. Current biology : CB. 25 [PubMed]

Song S, Sjöström PJ, Reigl M, Nelson S, Chklovskii DB. (2005). Highly nonrandom features of synaptic connectivity in local cortical circuits. PLoS biology. 3 [PubMed]

Stanley GB et al. (2012). Visual orientation and directional selectivity through thalamic synchrony. The Journal of neuroscience : the official journal of the Society for Neuroscience. 32 [PubMed]

Sun W, Tan Z, Mensh BD, Ji N. (2016). Thalamus provides layer 4 of primary visual cortex with orientation- and direction-tuned inputs. Nature neuroscience. 19 [PubMed]

Traub RD, Miles R, Wong RK. (1989). Model of the origin of rhythmic population oscillations in the hippocampal slice. Science (New York, N.Y.). 243 [PubMed]

Tsodyks MV, Skaggs WE, Sejnowski TJ, McNaughton BL. (1997). Paradoxical effects of external modulation of inhibitory interneurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 17 [PubMed]

Urbain N et al. (2015). Whisking-Related Changes in Neuronal Firing and Membrane Potential Dynamics in the Somatosensory Thalamus of Awake Mice. Cell reports. 13 [PubMed]

Varshney LR, Sjöström PJ, Chklovskii DB. (2006). Optimal information storage in noisy synapses under resource constraints. Neuron. 52 [PubMed]

Vincent SB. (1912). The function of vibrissae in the behavior of the white rat Behavior Monographs. 1(5)

Wang XJ, Buzsáki G. (1996). Gamma oscillation by synaptic inhibition in a hippocampal interneuronal network model. The Journal of neuroscience : the official journal of the Society for Neuroscience. 16 [PubMed]

Wehr M, Zador AM. (2003). Balanced inhibition underlies tuning and sharpens spike timing in auditory cortex. Nature. 426 [PubMed]

Wilent WB, Contreras D. (2005). Dynamics of excitation and inhibition underlying stimulus selectivity in rat somatosensory cortex. Nature neuroscience. 8 [PubMed]

Yarbus AL. (1967). Eye movements and vision.

Yu C, Derdikman D, Haidarliu S, Ahissar E. (2006). Parallel thalamic pathways for whisking and touch signals in the rat. PLoS biology. 4 [PubMed]

Yu C et al. (2015). Coding of object location in the vibrissal thalamocortical system. Cerebral cortex (New York, N.Y. : 1991). 25 [PubMed]

Yu J, Gutnisky DA, Hires SA, Svoboda K. (2016). Layer 4 fast-spiking interneurons filter thalamocortical signals during active somatosensation. Nature neuroscience. 19 [PubMed]

Zhang F et al. (2007). Multimodal fast optical interrogation of neural circuitry. Nature. 446 [PubMed]

Zillmer R, Brunel N, Hansel D. (2009). Very long transients, irregular firing, and chaotic dynamics in networks of randomly connected inhibitory integrate-and-fire neurons. Physical review. E, Statistical, nonlinear, and soft matter physics. 79 [PubMed]

van Vreeswijk C, Sompolinsky H. (1996). Chaos in neuronal networks with balanced excitatory and inhibitory activity. Science (New York, N.Y.). 274 [PubMed]

van Vreeswijk C, Sompolinsky H. (1998). Chaotic balanced state in a model of cortical circuits. Neural computation. 10 [PubMed]

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