Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)


Neymotin SA, Jacobs KM, Fenton AA, Lytton WW. (2011). Synaptic information transfer in computer models of neocortical columns. Journal of computational neuroscience. 30 [PubMed]

See more from authors: Neymotin SA · Jacobs KM · Fenton AA · Lytton WW

References and models cited by this paper

Aldworth ZN, Miller JP, Gedeon T, Cummins GI, Dimitrov AG. (2005). Dejittered spike-conditioned stimulus waveforms yield improved estimates of neuronal feature selectivity and spike-timing precision of sensory interneurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Bartos M, Vida I, Jonas P. (2007). Synaptic mechanisms of synchronized gamma oscillations in inhibitory interneuron networks. Nature reviews. Neuroscience. 8 [PubMed]

Belitski A et al. (2008). Low-frequency local field potentials and spikes in primary visual cortex convey independent visual information. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Brunel N. (2000). Dynamics of networks of randomly connected excitatory and inhibitory spiking neurons. Journal of physiology, Paris. 94 [PubMed]

Brunel N, Wang XJ. (2003). What determines the frequency of fast network oscillations with irregular neural discharges? I. Synaptic dynamics and excitation-inhibition balance. Journal of neurophysiology. 90 [PubMed]

Buonomano DV. (2009). Harnessing chaos in recurrent neural networks. Neuron. 63 [PubMed]

Buonomano DV, Maass W. (2009). State-dependent computations: spatiotemporal processing in cortical networks. Nature reviews. Neuroscience. 10 [PubMed]

Börgers C, Kopell N. (2005). Effects of noisy drive on rhythms in networks of excitatory and inhibitory neurons. Neural computation. 17 [PubMed]

Cohen NJ, Mccloskey M. (1989). Catastrophic interference in connectionist networks: The sequential learning problem Psychol Learn Motiv. 24

Dehaene S, Changeux JP. (2005). Ongoing spontaneous activity controls access to consciousness: a neuronal model for inattentional blindness. PLoS biology. 3 [PubMed]

Destexhe A, Contreras D. (2006). Neuronal computations with stochastic network states. Science (New York, N.Y.). 314 [PubMed]

Douglas RJ, Whitteridge D, Martin KAC. (1989). A canonical microcircuit for neocortex Neural Comput. 1

Edelman GM. (1987). Neural Darwinism: The Theory of Neural Group Selection.

French R. (1991). Using semi-distributed representations to overcome catastrophic forgetting in connectionist networks Proceedings of the 13th annual cognitive science society conference.

Friesen WO, Friesen JA. (1994). NeuroDynamix: computer models for neurophysiology. .

Gourévitch B, Eggermont JJ. (2007). Evaluating information transfer between auditory cortical neurons. Journal of neurophysiology. 97 [PubMed]

Gray CM, Singer W. (1989). Stimulus-specific neuronal oscillations in orientation columns of cat visual cortex. Proceedings of the National Academy of Sciences of the United States of America. 86 [PubMed]

Halgren E, Walter RD, Cherlow DG, Crandall PH. (1978). Mental phenomena evoked by electrical stimulation of the human hippocampal formation and amygdala. Brain : a journal of neurology. 101 [PubMed]

Hill S, Tononi G. (2005). Modeling sleep and wakefulness in the thalamocortical system. Journal of neurophysiology. 93 [PubMed]

Hines ML, Carnevale NT. (2001). NEURON: a tool for neuroscientists. The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry. 7 [PubMed]

Hines ML, Carnevale NT. (2006). The NEURON Book.

Hlavackova-schindler K, Palus M, Vejmelka M, Bhattacharya J. (2007). Causality detection based on information-theoretic approaches in time series analysis Physics Reports. 441

Izhikevich EM, Edelman GM. (2008). Large-scale model of mammalian thalamocortical systems. Proceedings of the National Academy of Sciences of the United States of America. 105 [PubMed]

Jaeger H, Haas H. (2004). Harnessing nonlinearity: predicting chaotic systems and saving energy in wireless communication. Science (New York, N.Y.). 304 [PubMed]

Jumarie G. (1990). Relative Information: Theories and Applications.

Kantz H, Marschinski R. (2002). Analysing the information flow between financial time series Condensed Matter Physics. 30

Kendall M. (1938). A new measure of rank correlation Biometrika. 30(1-2)

Knight W. (1966). A computer method for calculating Kendall's tau with ungrouped data Journal Of The American Statistical Associati. 61

Lazar AA, Pnevmatikakis EA. (2008). Faithful representation of stimuli with a population of integrate-and-fire neurons. Neural computation. 20 [PubMed]

Lytton WW. (1996). Optimizing synaptic conductance calculation for network simulations. Neural computation. 8 [PubMed]

Lytton WW. (1998). Adapting a feedforward heteroassociative network to Hodgkin-Huxley dynamics. Journal of computational neuroscience. 5 [PubMed]

Lytton WW. (2006). Neural Query System: Data-mining from within the NEURON simulator. Neuroinformatics. 4 [PubMed]

Lytton WW, Neymotin SA, Hines ML. (2008). The virtual slice setup. Journal of neuroscience methods. 171 [PubMed]

Lytton WW, Omurtag A. (2007). Tonic-clonic transitions in computer simulation. Journal of clinical neurophysiology : official publication of the American Electroencephalographic Society. 24 [PubMed]

Lytton WW, Sejnowski TJ. (1991). Simulations of cortical pyramidal neurons synchronized by inhibitory interneurons. Journal of neurophysiology. 66 [PubMed]

Lytton WW, Stewart M. (2007). Data mining through simulation. Methods in molecular biology (Clifton, N.J.). 401 [PubMed]

Mazzoni A, Panzeri S, Logothetis NK, Brunel N. (2008). Encoding of naturalistic stimuli by local field potential spectra in networks of excitatory and inhibitory neurons. PLoS computational biology. 4 [PubMed]

Moser EI, Moser MB. (1999). Is learning blocked by saturation of synaptic weights in the hippocampus? Neuroscience and biobehavioral reviews. 23 [PubMed]

Nelson S. (2002). Cortical microcircuits: diverse or canonical? Neuron. 36 [PubMed]

Palus M. (1996). Detecting nonlinearity in multivariate time series Physics Letters A. 213(3-4)

Penfield W. (1958). SOME MECHANISMS OF CONSCIOUSNESS DISCOVERED DURING ELECTRICAL STIMULATION OF THE BRAIN. Proceedings of the National Academy of Sciences of the United States of America. 44 [PubMed]

Phillips WA, Silverstein SM. (2003). Convergence of biological and psychological perspectives on cognitive coordination in schizophrenia. The Behavioral and brain sciences. 26 [PubMed]

Press WH, Teukolsky SA, Vetterling WT, Flannery BP. (2007). Numerical recipes: the art of scientific computing 3rd edition.

Quian Quiroga R, Panzeri S. (2009). Extracting information from neuronal populations: information theory and decoding approaches. Nature reviews. Neuroscience. 10 [PubMed]

Rao RP, Sejnowski TJ. (2001). Spike-timing-dependent Hebbian plasticity as temporal difference learning. Neural computation. 13 [PubMed]

Ratcliff R. (1990). Connectionist models of recognition memory: constraints imposed by learning and forgetting functions. Psychological review. 97 [PubMed]

Rieke F, Warland D, Bialek W. (1999). Spikes: Exploring the neural code.

Salinas E, Sejnowski TJ. (2001). Correlated neuronal activity and the flow of neural information. Nature reviews. Neuroscience. 2 [PubMed]

Salinas E, Sejnowski TJ. (2002). Integrate-and-fire neurons driven by correlated stochastic input. Neural computation. 14 [PubMed]

Schreiber T. (2000). Measuring information transfer Physical review letters. 85 [PubMed]

Sejnowski TJ, Destexhe A, Mainen Z. (1994). An efficient method for computing synaptic conductances based on a kinetic model of receptor binding Neural Comput. 6

Sirota A et al. (2008). Entrainment of neocortical neurons and gamma oscillations by the hippocampal theta rhythm. Neuron. 60 [PubMed]

Spencer KM et al. (2003). Abnormal neural synchrony in schizophrenia. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Spencer KM et al. (2004). Neural synchrony indexes disordered perception and cognition in schizophrenia. Proceedings of the National Academy of Sciences of the United States of America. 101 [PubMed]

Sporns O, Tononi G, Kötter R. (2005). The human connectome: A structural description of the human brain. PLoS computational biology. 1 [PubMed]

Stocks N, Mcdonnell M, Pearce C, Abbott D. (2003). Stochastic resonance and data processing inequality Electronics Letters. 39(17)

Tiesinga P, Sejnowski TJ. (2009). Cortical enlightenment: are attentional gamma oscillations driven by ING or PING? Neuron. 63 [PubMed]

Traub RD, Whittington MA, Jefferys GR. (1999). Fast Oscillations In Cortical Circuits.

Uhlhaas PJ et al. (2006). Dysfunctional long-range coordination of neural activity during Gestalt perception in schizophrenia. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Uhlhaas PJ, Singer W. (2006). Neural synchrony in brain disorders: relevance for cognitive dysfunctions and pathophysiology. Neuron. 52 [PubMed]

Uhlrich DJ, Manning KA, O'Laughlin ML, Lytton WW. (2005). Photic-induced sensitization: acquisition of an augmenting spike-wave response in the adult rat through repeated strobe exposure. Journal of neurophysiology. 94 [PubMed]

Victor JD. (2006). Approaches to Information-Theoretic Analysis of Neural Activity. Biological theory. 1 [PubMed]

Vogels TP, Rajan K, Abbott LF. (2005). Neural network dynamics. Annual review of neuroscience. 28 [PubMed]

Wang XJ, Buzsáki G. (1996). Gamma oscillation by synaptic inhibition in a hippocampal interneuronal network model. The Journal of neuroscience : the official journal of the Society for Neuroscience. 16 [PubMed]

Zhu JJ, Lytton WW, Xue JT, Uhlrich DJ. (1999). An intrinsic oscillation in interneurons of the rat lateral geniculate nucleus. Journal of neurophysiology. 81 [PubMed]

Zhu JJ, Uhlrich DJ, Lytton WW. (1999). Burst firing in identified rat geniculate interneurons. Neuroscience. 91 [PubMed]

von der Malsburg C, Schneider W. (1986). A neural cocktail-party processor. Biological cybernetics. 54 [PubMed]

References and models that cite this paper

Chadderdon GL et al. (2014). Motor cortex microcircuit simulation based on brain activity mapping. Neural computation. 26 [PubMed]

Kerr CC et al. (2012). Electrostimulation as a prosthesis for repair of information flow in a computer model of neocortex. IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society. 20 [PubMed]

Kerr CC et al. (2013). Cortical information flow in Parkinson's disease: a composite network/field model. Frontiers in computational neuroscience. 7 [PubMed]

Neymotin SA, Chadderdon GL, Kerr CC, Francis JT, Lytton WW. (2013). Reinforcement learning of two-joint virtual arm reaching in a computer model of sensorimotor cortex. Neural computation. 25 [PubMed]

Neymotin SA, Dura-Bernal S, Lakatos P, Sanger TD, Lytton WW. (2016). Multitarget Multiscale Simulation for Pharmacological Treatment of Dystonia in Motor Cortex. Frontiers in pharmacology. 7 [PubMed]

Neymotin SA et al. (2011). Ketamine disrupts ? modulation of ? in a computer model of hippocampus. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

Neymotin SA et al. (2011). Ketamine Disrupts Theta Modulation of Gamma in a Computer Model of Hippocampus The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

Neymotin SA, Lee H, Park E, Fenton AA, Lytton WW. (2011). Emergence of physiological oscillation frequencies in a computer model of neocortex. Frontiers in computational neuroscience. 5 [PubMed]

Neymotin SA et al. (2016). Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex. Neuroscience. 316 [PubMed]

Sherif MA, Neymotin SA, Lytton WW. (2020). In silico hippocampal modeling for multi-target pharmacotherapy in schizophrenia. NPJ schizophrenia. 6 [PubMed]

van Ooyen A et al. (2014). Independently outgrowing neurons and geometry-based synapse formation produce networks with realistic synaptic connectivity. PloS one. 9 [PubMed]

This website requires cookies and limited processing of your personal data in order to function. By continuing to browse or otherwise use this site, you are agreeing to this use. See our Privacy policy and how to cite and terms of use.