Mäki-Marttunen T, Iannella N, Edwards AG, Einevoll GT, Blackwell KT. (2020). A unified computational model for cortical post-synaptic plasticity. eLife. 9 [PubMed]

See more from authors: Mäki-Marttunen T · Iannella N · Edwards AG · Einevoll GT · Blackwell KT

References and models cited by this paper

Ahmadian G et al. (2004). Tyrosine phosphorylation of GluR2 is required for insulin-stimulated AMPA receptor endocytosis and LTD. The EMBO journal. 23 [PubMed]

Ashby MC et al. (2004). Removal of AMPA receptors (AMPARs) from synapses is preceded by transient endocytosis of extrasynaptic AMPARs. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

Badoual M et al. (2006). Biophysical and phenomenological models of multiple spike interactions in spike-timing dependent plasticity. International journal of neural systems. 16 [PubMed]

Bahl A, Stemmler MB, Herz AV, Roth A. (2012). Automated optimization of a reduced layer 5 pyramidal cell model based on experimental data. Journal of neuroscience methods. 210 [PubMed]

Bear MF, Cooper LN, Ebner FF. (1987). A physiological basis for a theory of synapse modification. Science (New York, N.Y.). 237 [PubMed]

Bhalla US, Iyengar R. (1999). Emergent properties of networks of biological signaling pathways. Science (New York, N.Y.). 283 [PubMed]

Bi GQ, Poo MM. (1998). Synaptic modifications in cultured hippocampal neurons: dependence on spike timing, synaptic strength, and postsynaptic cell type. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Bienenstock EL, Cooper LN, Munro PW. (1982). Theory for the development of neuron selectivity: orientation specificity and binocular interaction in visual cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 2 [PubMed]

Blackwell KT et al. (2019). Molecular mechanisms underlying striatal synaptic plasticity: relevance to chronic alcohol consumption and seeking. The European journal of neuroscience. 49 [PubMed]

Castellani GC, Quinlan EM, Bersani F, Cooper LN, Shouval HZ. (2005). A model of bidirectional synaptic plasticity: from signaling network to channel conductance. Learning & memory (Cold Spring Harbor, N.Y.). 12 [PubMed]

Castellani GC, Quinlan EM, Cooper LN, Shouval HZ. (2001). A biophysical model of bidirectional synaptic plasticity: dependence on AMPA and NMDA receptors. Proceedings of the National Academy of Sciences of the United States of America. 98 [PubMed]

Castro-Alamancos MA, Donoghue JP, Connors BW. (1995). Different forms of synaptic plasticity in somatosensory and motor areas of the neocortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 15 [PubMed]

Chung HJ, Xia J, Scannevin RH, Zhang X, Huganir RL. (2000). Phosphorylation of the AMPA receptor subunit GluR2 differentially regulates its interaction with PDZ domain-containing proteins. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

Cornelisse LN, van Elburg RA, Meredith RM, Yuste R, Mansvelder HD. (2007). High speed two-photon imaging of calcium dynamics in dendritic spines: consequences for spine calcium kinetics and buffer capacity. PloS one. 2 [PubMed]

D'Alcantara P, Schiffmann SN, Swillens S. (2003). Bidirectional synaptic plasticity as a consequence of interdependent Ca2+-controlled phosphorylation and dephosphorylation pathways. The European journal of neuroscience. 17 [PubMed]

Devor A et al. (2017). Genetic evidence for role of integration of fast and slow neurotransmission in schizophrenia. Molecular psychiatry. 22 [PubMed]

Diering GH, Heo S, Hussain NK, Liu B, Huganir RL. (2016). Extensive phosphorylation of AMPA receptors in neurons. Proceedings of the National Academy of Sciences of the United States of America. 113 [PubMed]

Ebner C, Clopath C, Jedlicka P, Cuntz H. (2019). Unifying Long-Term Plasticity Rules for Excitatory Synapses by Modeling Dendrites of Cortical Pyramidal Neurons. Cell reports. 29 [PubMed]

Evans RC, Blackwell KT. (2015). Calcium: amplitude, duration, or location? The Biological bulletin. 228 [PubMed]

Feldman DE. (2009). Synaptic mechanisms for plasticity in neocortex. Annual review of neuroscience. 32 [PubMed]

Gallimore AR, Kim T, Tanaka-Yamamoto K, De Schutter E. (2018). Switching On Depression and Potentiation in the Cerebellum. Cell reports. 22 [PubMed]

Hay E, Segev I. (2015). Dendritic Excitability and Gain Control in Recurrent Cortical Microcircuits. Cerebral cortex (New York, N.Y. : 1991). 25 [PubMed]

Hayer A, Bhalla US. (2005). Molecular switches at the synapse emerge from receptor and kinase traffic. PLoS computational biology. 1 [PubMed]

Heynen AJ et al. (2003). Molecular mechanism for loss of visual cortical responsiveness following brief monocular deprivation. Nature neuroscience. 6 [PubMed]

Holthoff K, Tsay D, Yuste R. (2002). Calcium dynamics of spines depend on their dendritic location. Neuron. 33 [PubMed]

Jȩdrzejewska-Szmek J, Luczak V, Abel T, Blackwell KT. (2017). ß-adrenergic signaling broadly contributes to LTP induction. PLoS computational biology. 13 [PubMed]

Karmarkar UR, Najarian MT, Buonomano DV. (2002). Mechanisms and significance of spike-timing dependent plasticity. Biological cybernetics. 87 [PubMed]

Kim B, Hawes SL, Gillani F, Wallace LJ, Blackwell KT. (2013). Signaling pathways involved in striatal synaptic plasticity are sensitive to temporal pattern and exhibit spatial specificity. PLoS computational biology. 9 [PubMed]

Klampfl S, Maass W. (2013). Emergence of dynamic memory traces in cortical microcircuit models through STDP. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

Kotaleski JH, Lester D, Blackwell KT. (2002). Subcellular interactions between parallel fibre and climbing fibre signals in Purkinje cells predict sensitivity of classical conditioning to interstimulus interval. Integrative physiological and behavioral science : the official journal of the Pavlovian Society. 37 [PubMed]

Kubota S, Kitajima T. (2008). A model for synaptic development regulated by NMDA receptor subunit expression. Journal of computational neuroscience. 24 [PubMed]

Larkman AU, Jack JJ. (1995). Synaptic plasticity: hippocampal LTP. Current opinion in neurobiology. 5 [PubMed]

Lisman J. (1989). A mechanism for the Hebb and the anti-Hebb processes underlying learning and memory. Proceedings of the National Academy of Sciences of the United States of America. 86 [PubMed]

Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML. (2010). Postsynaptic signal transduction models for long-term potentiation and depression. Frontiers in computational neuroscience. 4 [PubMed]

Markram H et al. (2015). Reconstruction and Simulation of Neocortical Microcircuitry. Cell. 163 [PubMed]

Matthews EA, Dietrich D. (2015). Buffer mobility and the regulation of neuronal calcium domains. Frontiers in cellular neuroscience. 9 [PubMed]

McDougal RA, Hines ML, Lytton WW. (2013). Reaction-diffusion in the NEURON simulator. Frontiers in neuroinformatics. 7 [PubMed]

Mundorf ML, Joseph JD, Austin CM, Caron MG, Wightman RM. (2001). Catecholamine release and uptake in the mouse prefrontal cortex. Journal of neurochemistry. 79 [PubMed]

Mäki-Marttunen T et al. (2018). A stepwise neuron model fitting procedure designed for recordings with high spatial resolution: Application to layer 5 pyramidal cells. Journal of neuroscience methods. 293 [PubMed]

Mäki-Marttunen T et al. (2019). Alterations in Schizophrenia-Associated Genes Can Lead to Increased Power in Delta Oscillations. Cerebral cortex (New York, N.Y. : 1991). 29 [PubMed]

Mäki-Marttunen T et al. (2017). Pleiotropic effects of schizophrenia-associated genetic variants in neuron firing and cardiac pacemaking revealed by computational modeling. Translational psychiatry. 7 [PubMed]

Nevian T, Sakmann B. (2006). Spine Ca2+ signaling in spike-timing-dependent plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Neymotin SA et al. (2016). Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex. Neuroscience. 316 [PubMed]

Roche KW, O'Brien RJ, Mammen AL, Bernhardt J, Huganir RL. (1996). Characterization of multiple phosphorylation sites on the AMPA receptor GluR1 subunit. Neuron. 16 [PubMed]

Seol GH et al. (2007). Neuromodulators control the polarity of spike-timing-dependent synaptic plasticity. Neuron. 55 [PubMed]

Shirai Y, Kashiwagi K, Yagi K, Sakai N, Saito N. (1998). Distinct effects of fatty acids on translocation of gamma- and epsilon-subspecies of protein kinase C. The Journal of cell biology. 143 [PubMed]

Sjöström PJ, Rancz EA, Roth A, Häusser M. (2008). Dendritic excitability and synaptic plasticity. Physiological reviews. 88 [PubMed]

Sjöström PJ, Turrigiano GG, Nelson SB. (2001). Rate, timing, and cooperativity jointly determine cortical synaptic plasticity. Neuron. 32 [PubMed]

Spruston N, Jonas P, Sakmann B. (1995). Dendritic glutamate receptor channels in rat hippocampal CA3 and CA1 pyramidal neurons. The Journal of physiology. 482 ( Pt 2) [PubMed]

Tsumoto T. (1990). Long-term potentiation and depression in the cerebral neocortex. The Japanese journal of physiology. 40 [PubMed]

Urakubo H, Honda M, Froemke RC, Kuroda S. (2008). Requirement of an allosteric kinetics of NMDA receptors for spike timing-dependent plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Weber CR, Piacentino V, Ginsburg KS, Houser SR, Bers DM. (2002). Na(+)-Ca(2+) exchange current and submembrane [Ca(2+)] during the cardiac action potential. Circulation research. 90 [PubMed]

Xia J, Chung HJ, Wihler C, Huganir RL, Linden DJ. (2000). Cerebellar long-term depression requires PKC-regulated interactions between GluR2/3 and PDZ domain-containing proteins. Neuron. 28 [PubMed]

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