Alle H, Roth A, Geiger JR. (2009). Energy-efficient action potentials in hippocampal mossy fibers. Science (New York, N.Y.). 325 [PubMed]

• Action potential reconstitution from measured current waveforms (Alle et al. 2009) [Model]

Bahl A, Stemmler MB, Herz AV, Roth A. (2012). Automated optimization of a reduced layer 5 pyramidal cell model based on experimental data. Journal of neuroscience methods. 210 [PubMed]

• A set of reduced models of layer 5 pyramidal neurons (Bahl et al. 2012) [Model]

Ben-Shalom R et al. (2022). NeuroGPU: Accelerating multi-compartment, biophysically detailed neuron simulations on GPUs Journal of neuroscience methods. 366 [PubMed]

• NeuroGPU example on L5_TTPC1_cADpyr232_1 (Ben-Shalom 2022)(Ramaswamy et al., 2015) [Model]

Edgerton JR, Hanson JE, Günay C, Jaeger D. (2010). Dendritic sodium channels regulate network integration in globus pallidus neurons: a modeling study. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

• Globus pallidus neuron models with differing dendritic Na channel expression (Edgerton et al., 2010) [Model]

Fleidervish IA, Lasser-Ross N, Gutnick MJ, Ross WN. (2010). Na+ imaging reveals little difference in action potential-evoked Na+ influx between axon and soma. Nature neuroscience. 13 [PubMed]

• Action potential-evoked Na+ influx are similar in axon and soma (Fleidervish et al. 2010) [Model]
• Action potential-evoked Na+ influx similar in axon and soma (Fleidervish et al. 2010) (Python) [Model]

Foust AJ, Yu Y, Popovic M, Zecevic D, McCormick DA. (2011). Somatic membrane potential and Kv1 channels control spike repolarization in cortical axon collaterals and presynaptic boutons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

• Spike repolarization in axon collaterals (Foust et al. 2011) [Model]

Frey U, Egert U, Heer F, Hafizovic S, Hierlemann A. (2009). Microelectronic system for high-resolution mapping of extracellular electric fields applied to brain slices. Biosensors & bioelectronics. 24 [PubMed]

Hallermann S, de Kock CP, Stuart GJ, Kole MH. (2012). State and location dependence of action potential metabolic cost in cortical pyramidal neurons. Nature neuroscience. 15 [PubMed]

• State and location dependence of action potential metabolic cost (Hallermann et al., 2012) [Model]

Hu W et al. (2009). Distinct contributions of Na(v)1.6 and Na(v)1.2 in action potential initiation and backpropagation. Nature neuroscience. 12 [PubMed]

• Action Potential initiation and backpropagation in Neocortical L5 Pyramidal Neuron (Hu et al. 2009) [Model]

Kole MH et al. (2008). Action potential generation requires a high sodium channel density in the axon initial segment. Nature neuroscience. 11 [PubMed]

• Na+ channel dependence of AP initiation in cortical pyramidal neuron (Kole et al. 2008) [Model]

Marcelin B et al. (2009). h channel-dependent deficit of theta oscillation resonance and phase shift in temporal lobe epilepsy. Neurobiology of disease. 33 [PubMed]

• CA1 pyramidal neuron: h channel-dependent deficit of theta oscill. resonance (Marcelin et al. 2008) [Model]

Michalikova M, Remme MW, Kempter R. (2017). Spikelets in Pyramidal Neurons: Action Potentials Initiated in the Axon Initial Segment That Do Not Activate the Soma. PLoS computational biology. 13 [PubMed]

• Spikelet generation and AP initiation in a L5 neocortical pyr neuron (Michalikova et al. 2017) Fig 1 [Model]
• Spikelet generation and AP initiation in a simplified pyr neuron (Michalikova et al. 2017) Fig 3 [Model]

Platkiewicz J, Brette R. (2010). A threshold equation for action potential initiation. PLoS computational biology. 6 [PubMed]

• A threshold equation for action potential initiation (Platkiewicz & Brette 2010) [Model]

Schmidt-Hieber C, Bischofberger J. (2010). Fast sodium channel gating supports localized and efficient axonal action potential initiation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

• Fast sodium channel gating in mossy fiber axons (Schmidt-Hieber et al. 2010) [Model]

Spratt PWE et al. (2021). Paradoxical hyperexcitability from NaV1.2 sodium channel loss in neocortical pyramidal cells Cell reports. 36 [PubMed]

• Hyperexcitability from Nav1.2 channel loss in neocortical pyramidal cells (Spratt et al 2021) [Model]

Vascak M, Sun J, Baer M, Jacobs KM, Povlishock JT. (2017). Mild Traumatic Brain Injury Evokes Pyramidal Neuron Axon Initial Segment Plasticity and Diffuse Presynaptic Inhibitory Terminal Loss. Frontiers in cellular neuroscience. 11 [PubMed]

Winters BD, Jin SX, Ledford KR, Golding NL. (2017). Amplitude Normalization of Dendritic EPSPs at the Soma of Binaural Coincidence Detector Neurons of the Medial Superior Olive. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37 [PubMed]

Yu Y, Shu Y, McCormick DA. (2008). Cortical action potential backpropagation explains spike threshold variability and rapid-onset kinetics. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

• AP back-prop. explains threshold variability and rapid rise (McCormick et al. 2007, Yu et al. 2008) [Model]