Almog M, Korngreen A. (2016). Is realistic neuronal modeling realistic? Journal of neurophysiology. 116 [PubMed]

Andrasfalvy BK, Magee JC. (2001). Distance-dependent increase in AMPA receptor number in the dendrites of adult hippocampal CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Andrásfalvy BK, Smith MA, Borchardt T, Sprengel R, Magee JC. (2003). Impaired regulation of synaptic strength in hippocampal neurons from GluR1-deficient mice. The Journal of physiology. 552 [PubMed]

Bianchi D et al. (2012). On the mechanisms underlying the depolarization block in the spiking dynamics of CA1 pyramidal neurons. Journal of computational neuroscience. 33 [PubMed]

• CA1 pyramidal neuron: depolarization block (Bianchi et al. 2012) [Model]

Billeh YN et al. (2020). Systematic Integration of Structural and Functional Data into Multi-scale Models of Mouse Primary Visual Cortex. Neuron. 106 [PubMed]

• Systematic integration of data into multi-scale models of mouse primary V1 (Billeh et al 2020) [Model]

Cutsuridis V, Cobb S, Graham BP. (2010). Encoding and retrieval in a model of the hippocampal CA1 microcircuit. Hippocampus. 20 [PubMed]

• Encoding and retrieval in a model of the hippocampal CA1 microcircuit (Cutsuridis et al. 2009) [Model]

Cutsuridis V, Poirazi P. (2015). A computational study on how theta modulated inhibition can account for the long temporal windows in the entorhinal-hippocampal loop. Neurobiology of learning and memory. 120 [PubMed]

• Long time windows from theta modulated inhib. in entorhinal–hippo. loop (Cutsuridis & Poirazi 2015) [Model]

Druckmann S et al. (2007). A novel multiple objective optimization framework for constraining conductance-based neuron models by experimental data. Frontiers in neuroscience. 1 [PubMed]

Einevoll GT et al. (2019). The Scientific Case for Brain Simulations. Neuron. 102 [PubMed]

Fricker D, Verheugen JA, Miles R. (1999). Cell-attached measurements of the firing threshold of rat hippocampal neurones. The Journal of physiology. 517 ( Pt 3) [PubMed]

Gasparini S, Migliore M, Magee JC. (2004). On the initiation and propagation of dendritic spikes in CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

• CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004) [Model]

Goaillard JM, Taylor AL, Schulz DJ, Marder E. (2009). Functional consequences of animal-to-animal variation in circuit parameters. Nature neuroscience. 12 [PubMed]

Golding NL, Kath WL, Spruston N. (2001). Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites. Journal of neurophysiology. 86 [PubMed]

• Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites (Golding et al 2001) [Model]

Golding NL, Mickus TJ, Katz Y, Kath WL, Spruston N. (2005). Factors mediating powerful voltage attenuation along CA1 pyramidal neuron dendrites. The Journal of physiology. 568 [PubMed]

• Voltage attenuation in CA1 pyramidal neuron dendrites (Golding et al 2005) [Model]

Günay C, Edgerton JR, Jaeger D. (2008). Channel density distributions explain spiking variability in the globus pallidus: a combined physiology and computer simulation database approach. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

• Globus pallidus multi-compartmental model neuron with realistic morphology (Gunay et al. 2008) [Model]

Herz AV, Gollisch T, Machens CK, Jaeger D. (2006). Modeling single-neuron dynamics and computations: a balance of detail and abstraction. Science (New York, N.Y.). 314 [PubMed]

Hines ML, Carnevale NT. (1997). The NEURON simulation environment. Neural computation. 9 [PubMed]

Iavarone E et al. (2019). Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons. PLoS computational biology. 15 [PubMed]

• Thalamocortical relay neuron models constrained by experiment and optimization (Iavarone et al 2019) [Model]

Jahr CE, Stevens CF. (1990). Voltage dependence of NMDA-activated macroscopic conductances predicted by single-channel kinetics. The Journal of neuroscience : the official journal of the Society for Neuroscience. 10 [PubMed]

Katz Y et al. (2009). Synapse distribution suggests a two-stage model of dendritic integration in CA1 pyramidal neurons. Neuron. 63 [PubMed]

• A two-stage model of dendritic integration in CA1 pyramidal neurons (Katz et al. 2009) [Model]

Kim Y, Hsu CL, Cembrowski MS, Mensh BD, Spruston N. (2015). Dendritic sodium spikes are required for long-term potentiation at distal synapses on hippocampal pyramidal neurons. eLife. 4 [PubMed]

• CA1 pyramidal neuron: Dendritic Na+ spikes are required for LTP at distal synapses (Kim et al 2015) [Model]

Liss B et al. (2001). Tuning pacemaker frequency of individual dopaminergic neurons by Kv4.3L and KChip3.1 transcription. The EMBO journal. 20 [PubMed]

Losonczy A, Magee JC. (2006). Integrative properties of radial oblique dendrites in hippocampal CA1 pyramidal neurons. Neuron. 50 [PubMed]

Magee JC, Cook EP. (2000). Somatic EPSP amplitude is independent of synapse location in hippocampal pyramidal neurons. Nature neuroscience. 3 [PubMed]

• CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000) [Model]

Marder E, Taylor AL. (2011). Multiple models to capture the variability in biological neurons and networks. Nature neuroscience. 14 [PubMed]

McDougal RA et al. (2017). Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience. Journal of computational neuroscience. 42 [PubMed]

Metz AE, Jarsky T, Martina M, Spruston N. (2005). R-type calcium channels contribute to afterdepolarization and bursting in hippocampal CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Migliore R et al. (2018). The physiological variability of channel density in hippocampal CA1 pyramidal cells and interneurons explored using a unified data-driven modeling workflow. PLoS computational biology. 14 [PubMed]

Narayanan R, Johnston D. (2010). The h current is a candidate mechanism for regulating the sliding modification threshold in a BCM-like synaptic learning rule. Journal of neurophysiology. 104 [PubMed]

• BCM-like synaptic plasticity with conductance-based models (Narayanan Johnston, 2010) [Model]

Poirazi P, Brannon T, Mel BW. (2003). Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell. Neuron. 37 [PubMed]

• CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Poirazi P, Brannon T, Mel BW. (2003). Pyramidal neuron as two-layer neural network. Neuron. 37 [PubMed]

• CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Schulz DJ, Goaillard JM, Marder E. (2006). Variable channel expression in identified single and electrically coupled neurons in different animals. Nature neuroscience. 9 [PubMed]

Sekulić V, Lawrence JJ, Skinner FK. (2014). Using multi-compartment ensemble modeling as an investigative tool of spatially distributed biophysical balances: application to hippocampal oriens-lacunosum/moleculare (O-LM) cells. PloS one. 9 [PubMed]

Shah MM, Migliore M, Valencia I, Cooper EC, Brown DA. (2008). Functional significance of axonal Kv7 channels in hippocampal pyramidal neurons. Proceedings of the National Academy of Sciences of the United States of America. 105 [PubMed]

• CA1 pyramidal neuron: functional significance of axonal Kv7 channels (Shah et al. 2008) [Model]

Spruston N, Johnston D. (1992). Perforated patch-clamp analysis of the passive membrane properties of three classes of hippocampal neurons. Journal of neurophysiology. 67 [PubMed]

Swensen AM, Bean BP. (2005). Robustness of burst firing in dissociated purkinje neurons with acute or long-term reductions in sodium conductance. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Tucker KR, Huertas MA, Horn JP, Canavier CC, Levitan ES. (2012). Pacemaker rate and depolarization block in nigral dopamine neurons: a somatic sodium channel balancing act. The Journal of neuroscience : the official journal of the Society for Neuroscience. 32 [PubMed]

Turi GF et al. (2019). Vasoactive Intestinal Polypeptide-Expressing Interneurons in the Hippocampus Support Goal-Oriented Spatial Learning. Neuron. 101 [PubMed]

Uebachs M et al. (2010). Efficacy loss of the anticonvulsant carbamazepine in mice lacking sodium channel beta subunits via paradoxical effects on persistent sodium currents. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

• CA1 pyramidal neuron to study INaP properties and repetitive firing (Uebachs et al. 2010) [Model]