Models by create date
Add:
Action Potential Initiation
Action Potentials
Action Selection/Decision Making
Active Dendrites
Activity Patterns
Acute hepatic encephalopathy (AHE)
Addiction
Aging/Alzheimer`s
Alcohol Use Disorder
Amblyopia
Analog coding
Anoxic depolarization
Apoptosis
Attractor Neural Network
Audition
Autism spectrum disorder
Axonal Action Potentials
Balanced networks
Behavioral switching
Beta oscillations
Bifurcation
Binocular energy model/Stereopsis
Biofeedback
Bipolar Disorder (BP)
Boolean network
Borderline Personality Disorder (BPD)
Brain Rhythms
Brain Tumor
Brugada
Bursting
COVID-19
CREB
Calcium dynamics
Calcium waves
Cardiac pacemaking
Cardiac-related electrode motion
Cellular volume dynamics
Chloride regulation
Circadian Rhythms
Coincidence Detection
Color selectivity
Complementary and alternative medicine
Conductance distributions
Conductances estimation
Conduction failure
Connectivity matrix
Context integration
Contrast-gain control
Current Dipole
Cytokine Signaling
Deep brain stimulation
Delay
Dendritic Action Potentials
Dendritic Bistability
Depolarization block
Depression
Detailed Neuronal Models
Development
Direction Selectivity
Disparity estimation
Double cable
Drug binding
Duration Selectivity
Dynamic extracellular concentrations
Early evolution
Effective Optokinetic Response (OKR)
Electrical-chemical
Electrodiffusion
Electrotonus
Eligibility traces
Energy consumption
Envelope synthesis
Ephaptic coupling
Epilepsy
Equivalent PI circuit
Erythromelalgia
Evoked LFP
Evolution
Excitability
Extracellular Fields
Eyeblink Conditioning (EBC)
Facilitation
Feature selectivity
G-protein coupled
Gain-bandwidth product (GBWP)
Gamma oscillations
Grid cell
Hallucinations
Heart disease
Hebbian plasticity
Homeostasis
Homeostatic plasticity
Huntington's
Impedance
Influence of Dendritic Geometry
Information transfer
Intermittent block
Intracortical Microstimulation
Intrinsic plasticity
Invertebrate
Ion Channel Kinetics
Kesten Process
Laminar Connectivity
Langevin process
Learning
Locking, mixed mode
Long-QT
Long-term Synaptic Plasticity
Magnetic stimulation
Magnetoencephalography
Maintenance
Major Depression Disease (MDD)
Markov-type model
Maximum entropy models
Membrane Properties
Memory
Methods
Motion Detection
Motor control
Multiple sclerosis
Multiscale
Negative feedback
Neurite growth
Neurite loss
Neurogenesis
Neuromodulation
Neurotransmitter dynamics
Nociception
Noise Sensitivity
Olfaction
Orientation selectivity
Oscillations
Pacemaking mechanism
Pain processing
Parameter Fitting
Parameter sensitivity
Paranoia
Parkinson's
Pathophysiology
Pattern Recognition
Pattern Separation
Perceptual Categories
Persistent activity
Phase Response Curves
Phase interference
Phenomenological inductance
Place cell/field
Post-Tetanic Potentiation
Posture and locomotion
Potassium buffering
Ramping
Rate-coding model neurons
Reaction-diffusion
Rebound firing
Receptive field
Recurrent Discharge
Reinforcement Learning
Reliability
Reservoir Computing
Respiratory control
Reward-modulated STDP
STDP
Schizophrenia
Sensory coding
Sensory processing
Sequence learning
Short-term Synaptic Plasticity
Signaling pathways
Simplified Models
Sleep
Sleep-Wake transition
Sodium pump
Soma-dendrite cross-talk
Spatial Navigation
Spatial connectivity
Spatio-temporal Activity Patterns
Spike Frequency Adaptation
Spindles
Spreading depolarization
Spreading depression
Stimulus selectivity
Stochastic simulation
Storage/recall
Structural plasticity
Stuttering
Subthreshold signaling
Synaptic Amplification
Synaptic Convergence
Synaptic Integration
Synaptic Plasticity
Synaptic Tagging and Capture
Synaptic noise
Synaptic-input statistic
Synchronization
Temperature
Temporal Coding
Temporal Pattern Generation
Therapeutics
Theta oscillations
Timothy Syndrome
Top-down input
Touch
Triggered activity
Tutorial/Teaching
Two-port analysis of electrotonus
Unsupervised Learning
Vestibular
Vision
Voltage transfer ratio
Volume transmission
Whisking
Winner-take-all
Working memory
unscented Kalman filter
AnimatLab v1
Arbor
BETSE (web link to model)
BioNet (web link to model)
BioPAX
BioPAX (web link to model)
BluePyOpt
Brain Dynamics Toolbox
Brain Dynamics Toolbox (web link to model)
Brian
Brian (web link to method)
Brian (web link to model)
Brian 2
Brian 2 (web link to model)
C or C++ program
C or C++ program (web link to model)
C#
CNrun
COMSOL
COMSOL (web link to model)
CONTENT
COPASI
CSIM
CSIM (web link to model)
CalC Calcium Calculator
CalC Calcium Calculator (web link to model)
Catacomb
Catacomb (web link to model)
CellDesigner
CellExcite
CellExcite (web link to model)
CellML
CellML (web link to model)
Chemesis
Cx3Dp
Cython
DynaSim
DynaSim (web link to model)
Dynamics Solver
EDLUT
ERNST (Event Related Neuronal Simulation Tool)
ERNST (Event Related Neuronal Simulation Tool) (web link to model)
Emergent/PDP++
FNS Neural Simulator
FORTRAN
FORTRAN (web link to a model)
GENESIS
GENESIS (web link to model)
GNUstep NeXTStep/OpenStep
HSPICE
IChMASCOT
IDL
IGOR Pro
IGOR Pro (web link to model)
IonChannelLab
Java
Java (web link to model)
Javascript
Javascript (web link to model)
Julia
Julia (web link to model)
KInNeSS
KInNeSS (web link to model)
KNPsim (web link to method)
L-Neuron
LCG
LFPy
LFPy (web link to model)
LibRoadRunner
Lisp
Lua
MATLAB
MATLAB (web link to model)
MCell
MOOSE/PyMOOSE
MOOSE/PyMOOSE (web link to method)
MVASpike
MadSim
Mathematica
Mathematica (web link to model)
MySQL
MySQL (web link to model)
NCS
NEST
NEST (web link to model)
NEURON
NEURON (web link to model)
NEURONPM
NEURONPM (web link to tool)
NSL
NSM
NSM (web link to model)
Nengo
Neosim
NetPyNE
Network
NeuGen
Neural Field Simulator
NeuroDevSim
NeuroGPU
NeuroML
NeuroML (web link to model)
NeuroRD
NeuronC
NeuronC (web link to model)
NeuronetExperimenter
NeuronetExperimenter (web link to model)
Neuronify
Neuronify (web link to model)
Neuronvisio
Neuronvisio (web link to model)
Norns - Neural Net Studio
Octave
PCSIM
PGENESIS
PSICS
PSpice
Pascal
Pascal (web link to model)
Pascal/Delphi
PyNN
Python
Python (web link to model)
QBasic/QuickBasic/Turbo Basic/VBA
QuB
R
R (web link to model)
ReMoto
ReMoto (web link to model)
SABER
SBML
SBML (web link to model)
SNNAP
SPLIT
STEPS
STEPS (web link to model)
SciLab
Scilab (web link to model)
Simulink
Snnet
Snudda
Snudda (web link to model)
SpiNNaker
Sspice Symbolic SPICE
Surf-Hippo
Synthesis
T2N
T2N (web link to model)
The Virtual Brain
The Virtual Brain (web link to model)
The Virtual Mouse Brain (TVMB)
The Virtual Mouse Brain (TVMB) (web link to model)
Topographica
Topographica (web link to model)
Trentool
VERTEX
Virtual Cell
Virtual Cell (web link to model)
XML
XML (web link to model)
XNBC
XPPAUT
XPPAUT (web link to model)
Yale HMM
cirsiumNeuron
cirsiumNeuron (web link to model)
eFEL
neuroConstruct
neuroConstruct (web link to model)
neurolib
neurolib (web link to model)
ngspice
pHHotoreceptor
parplex
Abstract Hindmarsh-Rose neuron
Abstract Izhikevich neuron
Abstract Morris-Lecar neuron
Abstract Rulkov-Bazhenov map neurons
Abstract Wang-Buzsaki neuron
Abstract integrate-and-fire adaptive exponential (AdEx) neuron
Abstract integrate-and-fire fractional leaky neuron
Abstract integrate-and-fire leaky neuron
Abstract integrate-and-fire leaky neuron with dendritic subunits
Abstract integrate-and-fire leaky neuron with exponential post-synaptic current
Abstract integrate-and-fire neuron
Abstract quadratic integrate-and-fire
Abstract rate-based neuron
Abstract single compartment conductance based cell
Abstract theta neuron
Antennal lobe olfactory projection neuron (insect)
Aplysia B31/B32 neuron
Aplysia R15 bursting neuron
Aplysia cultured neuron
Aplysia feeding CPG neurons
Aplysia interneuron
Aplysia motor neuron
Aplysia sensory neuron
Arteriolar network
Astrocyte
Auditory nerve
B lymphocyte
Barrel cortex L2/3 pyramidal cell
Brainstem neuron
C elegans AWCon
C elegans Hermaphrodite-Specific neuron (HSN)
C elegans VC motor neuron
C elegans motor neuron RMD
C elegans uterine-vulval cell (uv1)
CN stellate cell
Cardiac atrial cell
Cardiac ventricular cell
Cerebellum Purkinje GABA cell
Cerebellum deep nucleus neuron
Cerebellum golgi cell
Cerebellum interneuron Golgi GABA cell
Cerebellum interneuron granule GLU cell
Cerebellum interneuron stellate GABA cell
Cochlea hair inner GLU cell
Cochlea hair outer GLU cell
Cochlear ganglion cell Type II
Cochlear nucleus bushy GLU cell
Cochlear nucleus octopus GLU cell
Cochlear nucleus pyramidal/fusiform GLU cell
Crayfish identified nonspiking interneuron
Crayfish motor neuron
Dentate gyrus HIPP cell
Dentate gyrus MOPP cell
Dentate gyrus basket cell
Dentate gyrus granule GLU cell
Dentate gyrus hilar cell
Dentate gyrus mossy cell
Depressor scutorum rostralis muscle cell
Dopamine neuron of vlPAG/DRN
Dopaminergic substantia nigra neuron
Dorsal Root Ganglion (DRG) cell
Dorsal Root Ganglion cell: Spinal cord muscle spindle type II sensory fiber
Dorsal Root Ganglion cell: Spinal cord muscle spindle type Ia sensory fiber
Dorsal Root Ganglion cell: cold sensing
Drosophila antennal lobe DM1 projection neuron
Drosophila dendritic arborization neurons
Drosophila ventral lateral neuron (LNV)
ELL Medium Ganglion cell
ELL pyramidal cell
Earthworm medial giant fiber
Electric fish P- and T-type primary afferent fibers
Electric fish midbrain torus semicircularis neuron
Entorhinal cortex fast-spiking interneuron
Entorhinal cortex pyramidal cell
Entorhinal cortex stellate cell
Fly lamina neuron
Fly lobula plate T4 neuron
Fly lobular plate vertical system cell
Fly medulla neuron
Fly vertical system tangential cell
Gastrointestinal tract intrinsic sensory neuron
Globus pallidus neuron
Globus pallidus principal GABA cell
GnRH neuron
Grueneberg ganglion neuron
Heart cell
Helix pacemaker bursting neuron (RPa1)
Hermissenda photoreceptor Type A
Hermissenda photoreceptor Type B
Hippocampal CA1 CR/VIP cell
Hippocampus CA1 PV+ fast-firing interneuron
Hippocampus CA1 axo-axonic cell
Hippocampus CA1 basket cell
Hippocampus CA1 basket cell - CCK/VIP
Hippocampus CA1 bistratified cell
Hippocampus CA1 interneuron basket GABA cell
Hippocampus CA1 interneuron oriens alveus GABA cell
Hippocampus CA1 pyramidal GLU cell
Hippocampus CA1 stratum oriens lacunosum-moleculare interneuron
Hippocampus CA1 stratum radiatum interneuron
Hippocampus CA3 axo-axonic cells
Hippocampus CA3 interneuron basket GABA cell
Hippocampus CA3 interneuron oriens alveus GABA cell
Hippocampus CA3 pyramidal GLU cell
Hippocampus CA3 stratum oriens lacunosum-moleculare interneuron
Hippocampus CA3 stratum radiatum lacunosum-moleculare interneuron
Hippocampus CA4 pyramidal GLU cell
Hippocampus dissociated neuron
Hippocampus septum medial GABAergic neuron
Hodgkin-Huxley neuron
Honeybee kenyon cell
Hypoglossal motor neuron
Inferior olive neuron
Insect photoreceptor
Intramuscular interstitial cell of Cajal (ICCIM)
Lateral Superior Olive (LSO) cell
Leech C interneuron
Leech Retzius neuron
Leech S cell
Leech T segmental sensory neuron
Leech heart interneuron
Leech heart motor neuron (HE)
Leech pressure (P) mechanosensory neuron
Locus Coeruleus neuron
Locus ceruleus principal NE cell
Locust Giant GABAergic Neuron (GGN)
Locust Lobula Giant Movement Detector (LGMD) neuron
Macrophage
Mauthner cell
Medial Nucleus of the Trapezoid Body (MNTB) neuron
Medial Superior Olive (MSO) cell
Microglia
Multi-timescale adaptive threshold non-resetting leaky integrate and fire
Myelinated neuron
Myenteric interstitial cell of Cajal (ICCMY)
NG108-15 neuronal cell
Neocortex L2/3 pyramidal GLU cell
Neocortex L5/6 pyramidal GLU cell
Neocortex M1 L2/6 pyramidal intratelencephalic GLU cell
Neocortex M1 L4 stellate GLU cell
Neocortex M1 L5B pyramidal pyramidal tract GLU cell
Neocortex M1 L6 pyramidal corticothalamic GLU cell
Neocortex M1 interneuron basket PV GABA cell
Neocortex M1 interneuron bipolar VIP/CR GABA cell
Neocortex M1 interneuron chandelier SOM GABA cell
Neocortex U1 L2/6 pyramidal intratelencephalic GLU cell
Neocortex U1 L4 stellate GLU cell
Neocortex U1 L5B pyramidal pyramidal tract GLU cell
Neocortex U1 L6 pyramidal corticalthalamic GLU cell
Neocortex U1 interneuron basket PV GABA cell
Neocortex U1 interneuron bipolar VIP/CR GABA cell
Neocortex U1 interneuron chandelier SOM GABA cell
Neocortex V1 L4 stellate GLU cell
Neocortex V1 L5B pyramidal pyramidal tract GLU cell
Neocortex V1 interneuron basket PV GABA cell
Neocortex V1 interneuron bipolar VIP/CR GABA cell
Neocortex V1 interneuron chandelier SOM GABA cell
Neocortex bitufted interneuron
Neocortex deep neurogliaform interneuron
Neocortex dissociated cultured nerve cell
Neocortex fast spiking (FS) interneuron
Neocortex layer 2-3 interneuron
Neocortex layer 4 interneuron
Neocortex layer 4 neuron
Neocortex layer 4 pyramidal cell
Neocortex layer 5 interneuron
Neocortex layer 5 pyramidal cell
Neocortex layer 6a interneuron
Neocortex primary motor area pyramidal layer 5 corticospinal cell
Neocortex spiking irregular interneuron
Neocortex spiking low threshold (LTS) neuron
Neocortex spiking regular (RS) neuron
Neocortex spiny stellate cell
Neocortex superficial neurogliaform interneuron
Neostriatum fast spiking interneuron
Neostriatum interneuron ACh cell
Neostriatum interneuron SOM/NOS GABA cell
Neostriatum interneuron gaba/parvalbumin GABA cell
Neostriatum medium spiny direct pathway GABA cell
Neostriatum medium spiny indirect pathway GABA cell
Neostriatum spiny neuron
Neuroblastoma
Nucleus accumbens spiny projection neuron
Nucleus laminaris neuron
Olfactory bulb (accessory) mitral cell
Olfactory bulb main interneuron granule MC GABA cell
Olfactory bulb main interneuron granule TC GABA cell
Olfactory bulb main interneuron periglomerular GABA cell
Olfactory bulb main interneuron tufted external GABA cell
Olfactory bulb main juxtaglomerular cell
Olfactory bulb main mitral GLU cell
Olfactory bulb main tufted cell external
Olfactory bulb main tufted middle GLU cell
Olfactory bulb short axon cell
Olfactory bulb short axon deep GABA cell
Olfactory receptor GLU cell
Pancreatic Beta Cell
Pinsky-Rinzel CA1/3 pyramidal cell
Piriform cortex anterior interneuron deep layer GABA cell
Piriform cortex anterior interneuron layer II GABA cell
Piriform cortex anterior interneuron superficial GABA cell
Piriform cortex anterior pyramidal deep GLU cell
Piriform cortex anterior pyramidal layer II GLU cell
Piriform cortex anterior semilunar GLU cell
Piriform cortex posterior interneuron deep GABA cell
Piriform cortex posterior interneuron layer ll GABA cell
Piriform cortex posterior interneuron superficial GABA cell
Piriform cortex posterior pyramidal deep GLU cell
Piriform cortex posterior pyramidal layer II GLU cell
Piriform cortex posterior semilunar GLU cell
Pituitary cell
PreBotzinger complex neuron
Raphe nuclei principal 5HT cell
Respiratory column neuron
Retina amacrine ACh cell
Retina amacrine cell
Retina bipolar GLU cell
Retina ganglion GLU cell
Retina horizontal GABA cell
Retina horizontal cell
Retina photoreceptor cone GLU cell
Retina photoreceptor rod GLU cell
Septum principal ACh cell
Skeletal muscle cell
Spinal cord Ia interneuron
Spinal cord Ib interneuron
Spinal cord lamina I neuron
Spinal cord lamina I-III interneuron
Spinal cord lumbar Interneuron 1a GLY cell
Spinal cord lumbar motor neuron alpha ACh cell
Spinal cord lumbar motor neuron gamma ACh cell
Spinal cord motor neuron fast fatiguing
Spinal cord motor neuron fatigue resistant
Spinal cord motor neuron slow twitch
Spinal cord renshaw cell
Spinal cord sympathetic preganglionic neuron
Spinal lamprey neuron
Squid axon
Stick insect nonspiking interneuron
Stomatogastric Ganglion (STG) Gastric Mill (GM) cell
Stomatogastric Ganglion (STG) Lateral Gastric (LG) cell
Stomatogastric Ganglion (STG) Lateral Pyloric (LP) cell
Stomatogastric Ganglion (STG) Modulatory commissural neuron 1 (MCN1)
Stomatogastric Ganglion (STG) interneuron 1 (Int1)
Stomatogastric ganglion (STG) pyloric dilator (PD) neuron
Stomatogastric ganglion (STG) pyloric neuron
Striatal projection neuron
Substantia nigra pars compacta DA cell
Substantia nigra pars reticulata principal GABA cell
Subthalamic nucleus principal GABA cell
Subthalamus nucleus projection neuron
Superior paraolivary nucleus neuron
Suprachiasmatic nucleus (SCN) neuron
Teleost thalamic neuron
Thalamus DLM projection neuron
Thalamus geniculate nucleus/lateral principal GLU cell
Thalamus lateral geniculate nucleus interneuron
Thalamus reticular nucleus GABA cell
Tritonia cerebral cell
Tritonia swim interneuron dorsal
Tritonia swim interneuron ventral
Turtle dorsal cortex horizontal cell
Turtle dorsal cortex lateral pyramidal cell
Turtle dorsal cortex medial pyramidal cell
Turtle dorsal cortex stellate cell
Turtle dorsal cortex subpial cell
Turtle vestibular neuron
Urinary Bladder small-diameter DRG neuron
Ventral cochlear nucleus T stellate (chopper) neuron
Ventral tegmental area GABA neuron
Ventral tegmental area dopamine neuron
Vestibular neuron
Vestibular nucleus neuron
Vestibular organ hair GLU cell
Vibrissa motoneuron
Vibrissa motor plant
Wide dynamic range neuron
Zebra Finch RA projection neuron
ATP-senstive potassium current
Ca pump
Channelrhodopsin (ChR)
I A
I A, slow
I ANO2
I C
I CAN
I CNG
I Ca SOCC
I Ca,p
I Calcium
I Chloride
I Cl, leak
I Cl,Ca
I K
I K,Ca
I K,leak
I Krp
I L high threshold
I M
I MI
I Mixed
I N
I Na, leak
I Na, slow inactivation
I Na,p
I Na,t
I Potassium
I Q
I R
I Sodium
I T low threshold
I TRPM4
I TRPM8
I h
I p,q
I trp
IK Bkca
IK Skca
I_AHP
I_HCO3
I_HERG
I_K,Na
I_KD
I_KHT
I_KLT
I_Ks
I_Na,Ca
I_SERCA
KCC1
KCC2
KCNQ1
Kir
Kir, inactivating
Kir2 leak
Late Na
NBC
NKCC1
Na+-glutamate transporter
Na/Ca exchanger
Na/K pump
Osmosis-driven water flux
TASK channel
This database was founded as part of the SenseLab project which was supported by the Human Brain Project (NIDCD, NIMH, NIA, NICD, NINDS), by MURI (Multidisciplinary University Research Initiative), and by R01 DC 009977 from the National Institute for Deafness and other Communication Disorders.