A multiphysics neuron model for cellular volume dynamics (Lee et al. 2011)

Cressman JR, Ullah G, Ziburkus J, Schiff SJ, Barreto E. (2009). The influence of sodium and potassium dynamics on excitability, seizures, and the stability of persistent states: I. Single neuron dynamics. Journal of computational neuroscience. 26 [PubMed]

• Single neuron with dynamic ion concentrations (Cressman et al. 2009) [Model]

Fröhlich F, Sejnowski TJ, Bazhenov M. (2010). Network bistability mediates spontaneous transitions between normal and pathological brain states. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

HODGKIN AL, HUXLEY AF. (1952). A quantitative description of membrane current and its application to conduction and excitation in nerve. The Journal of physiology. 117 [PubMed]

• Squid axon (Hodgkin, Huxley 1952) (NEURON) [Model]
• Squid axon (Hodgkin, Huxley 1952) (SNNAP) [Model]
• Squid axon (Hodgkin, Huxley 1952) (LabAXON) [Model]
• Squid axon (Hodgkin, Huxley 1952) (SBML, XPP, other) [Model]
• Squid axon (Hodgkin, Huxley 1952) used in (Chen et al 2010) (R language) [Model]

Kager H, Wadman WJ, Somjen GG. (2002). Conditions for the triggering of spreading depression studied with computer simulations. Journal of neurophysiology. 88 [PubMed]

Lee J, Kim SJ. (2010). Spectrum measurement of fast optical signal of neural activity in brain tissue and its theoretical origin. NeuroImage. 51 [PubMed]

Syková E, Vargová L, Kubinová S, Jendelová P, Chvátal A. (2003). The relationship between changes in intrinsic optical signals and cell swelling in rat spinal cord slices. NeuroImage. 18 [PubMed]

Sætra MJ, Einevoll GT, Halnes G. (2021). An electrodiffusive neuron-extracellular-glia model for exploring the genesis of slow potentials in the brain PLoS computational biology. 17 [PubMed]

• The electrodiffusive neuron-extracellular-glia (edNEG) model (Sætra et al. 2021) [Model]