Horwitz B et al. (2005). Investigating the neural basis for functional and effective connectivity. Application to fMRI. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 360 [PubMed]
Kronhaus DM, Willshaw DJ. (2006). The cingulate as a catalyst region for global dysfunction: a dynamical modelling paradigm. Cerebral cortex (New York, N.Y. : 1991). 16 [PubMed]
Ulloa A, Horwitz B. (2016). Embedding Task-Based Neural Models into a Connectome-Based Model of the Cerebral Cortex. Frontiers in neuroinformatics. 10 [PubMed]
Alstott J, Breakspear M, Hagmann P, Cammoun L, Sporns O. (2009). Modeling the impact of lesions in the human brain. PLoS computational biology. 5 [PubMed]
Bandettini PA, Bowtell R, Jezzard P, Turner R. (2012). Ultrahigh field systems and applications at 7 T and beyond: progress, pitfalls, and potential. Magnetic resonance in medicine. 67 [PubMed]
Banerjee A, Pillai AS, Horwitz B. (2011). Using large-scale neural models to interpret connectivity measures of cortico-cortical dynamics at millisecond temporal resolution. Frontiers in systems neuroscience. 5 [PubMed]
Banerjee A, Pillai AS, Sperling JR, Smith JF, Horwitz B. (2012). Temporal microstructure of cortical networks (TMCN) underlying task-related differences. NeuroImage. 62 [PubMed]
Bojak I, Oostendorp TF, Reid AT, Kötter R. (2011). Towards a model-based integration of co-registered electroencephalography/functional magnetic resonance imaging data with realistic neural population meshes. Philosophical transactions. Series A, Mathematical, physical, and engineering sciences. 369 [PubMed]
Cabral J, Hugues E, Kringelbach ML, Deco G. (2012). Modeling the outcome of structural disconnection on resting-state functional connectivity. NeuroImage. 62 [PubMed]
Cabral J, Hugues E, Sporns O, Deco G. (2011). Role of local network oscillations in resting-state functional connectivity. NeuroImage. 57 [PubMed]
Corchs S, Deco G. (2002). Large-scale neural model for visual attention: integration of experimental single-cell and fMRI data. Cerebral cortex (New York, N.Y. : 1991). 12 [PubMed]
David O, Harrison L, Friston KJ. (2005). Modelling event-related responses in the brain. NeuroImage. 25 [PubMed]
De Weerd P, Goebel R. (2009). Perceptual filling-in: from experimental data to neural network modeling The Cognitive Neurosciences.
Deco G, Jirsa V, McIntosh AR, Sporns O, Kötter R. (2009). Key role of coupling, delay, and noise in resting brain fluctuations. Proceedings of the National Academy of Sciences of the United States of America. 106 [PubMed]
Deco G, Rolls ET, Horwitz B. (2004). "What" and "where" in visual working memory: a computational neurodynamical perspective for integrating FMRI and single-neuron data. Journal of cognitive neuroscience. 16 [PubMed]
Eliasmith C et al. (2012). A large-scale model of the functioning brain. Science (New York, N.Y.). 338 [PubMed]
Friston KJ, Harrison L, Penny W. (2003). Dynamic causal modelling. NeuroImage. 19 [PubMed]
Friston KJ, Mechelli A, Turner R, Price CJ. (2000). Nonlinear responses in fMRI: the Balloon model, Volterra kernels, and other hemodynamics. NeuroImage. 12 [PubMed]
Funahashi S, Bruce CJ, Goldman-Rakic PS. (1990). Visuospatial coding in primate prefrontal neurons revealed by oculomotor paradigms. Journal of neurophysiology. 63 [PubMed]
Fürtinger S, Zinn JC, Simonyan K. (2014). A neural population model incorporating dopaminergic neurotransmission during complex voluntary behaviors. PLoS computational biology. 10 [PubMed]
Garagnani M, Pulvermüller F. (2013). Neuronal correlates of decisions to speak and act: Spontaneous emergence and dynamic topographies in a computational model of frontal and temporal areas. Brain and language. 127 [PubMed]
Garagnani M, Wennekers T, Pulvermüller F. (2008). A neuroanatomically grounded Hebbian-learning model of attention-language interactions in the human brain. The European journal of neuroscience. 27 [PubMed]
Ghosh A, Rho Y, McIntosh AR, Kötter R, Jirsa VK. (2008). Noise during rest enables the exploration of the brain's dynamic repertoire. PLoS computational biology. 4 [PubMed]
Hagmann P et al. (2008). Mapping the structural core of human cerebral cortex. PLoS biology. 6 [PubMed]
Haxby JV et al. (1991). Dissociation of object and spatial visual processing pathways in human extrastriate cortex. Proceedings of the National Academy of Sciences of the United States of America. 88 [PubMed]
Honey CJ, Kötter R, Breakspear M, Sporns O. (2007). Network structure of cerebral cortex shapes functional connectivity on multiple time scales. Proceedings of the National Academy of Sciences of the United States of America. 104 [PubMed]
Horwitz B, Banerjee A. (2012). A role for neural modeling in the study of brain disorders. Frontiers in systems neuroscience. 6 [PubMed]
Horwitz B, Tagamets MA. (1999). Predicting human functional maps with neural net modeling. Human brain mapping. 8 [PubMed]
Horwitz B, Tagamets MA, McIntosh AR. (1999). Neural modeling, functional brain imaging, and cognition. Trends in cognitive sciences. 3 [PubMed]
Horwitz B et al. (2005). Investigating the neural basis for functional and effective connectivity. Application to fMRI. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 360 [PubMed]
Husain FT, Tagamets MA, Fromm SJ, Braun AR, Horwitz B. (2004). Relating neuronal dynamics for auditory object processing to neuroimaging activity: a computational modeling and an fMRI study. NeuroImage. 21 [PubMed]
Jansen BH, Rit VG. (1995). Electroencephalogram and visual evoked potential generation in a mathematical model of coupled cortical columns. Biological cybernetics. 73 [PubMed]
Jirsa VK, Sporns O, Breakspear M, Deco G, McIntosh AR. (2010). Towards the virtual brain: network modeling of the intact and the damaged brain. Archives italiennes de biologie. 148 [PubMed]
Kötter R. (2004). Online retrieval, processing, and visualization of primate connectivity data from the CoCoMac database. Neuroinformatics. 2 [PubMed]
Lee L, Friston K, Horwitz B. (2006). Large-scale neural models and dynamic causal modelling. NeuroImage. 30 [PubMed]
McIntosh AR et al. (1994). Network analysis of cortical visual pathways mapped with PET. The Journal of neuroscience : the official journal of the Society for Neuroscience. 14 [PubMed]
Peters JC, Jans B, van de Ven V, De Weerd P, Goebel R. (2010). Dynamic brightness induction in V1: analyzing simulated and empirically acquired fMRI data in a "common brain space" framework. NeuroImage. 52 [PubMed]
Peters JC, Reithler J, Goebel R. (2012). Modeling invariant object processing based on tight integration of simulated and empirical data in a Common Brain Space. Frontiers in computational neuroscience. 6 [PubMed]
Ponce-Alvarez A, He BJ, Hagmann P, Deco G. (2015). Task-Driven Activity Reduces the Cortical Activity Space of the Brain: Experiment and Whole-Brain Modeling. PLoS computational biology. 11 [PubMed]
Ritter P, Schirner M, McIntosh AR, Jirsa VK. (2013). The virtual brain integrates computational modeling and multimodal neuroimaging. Brain connectivity. 3 [PubMed]
Robinson PA, Rennie CJ, Rowe DL, O'Connor SC, Gordon E. (2005). Multiscale brain modelling. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 360 [PubMed]
Sanz Leon P et al. (2013). The Virtual Brain: a simulator of primate brain network dynamics. Frontiers in neuroinformatics. 7 [PubMed]
Sanz-Leon P, Knock SA, Spiegler A, Jirsa VK. (2015). Mathematical framework for large-scale brain network modeling in The Virtual Brain. NeuroImage. 111 [PubMed]
Sarvas J. (1987). Basic mathematical and electromagnetic concepts of the biomagnetic inverse problem. Physics in medicine and biology. 32 [PubMed]
Schirner M, Rothmeier S, Jirsa VK, McIntosh AR, Ritter P. (2015). An automated pipeline for constructing personalized virtual brains from multimodal neuroimaging data. NeuroImage. 117 [PubMed]
Stephan KE, Weiskopf N, Drysdale PM, Robinson PA, Friston KJ. (2007). Comparing hemodynamic models with DCM. NeuroImage. 38 [PubMed]
Tagamets MA, Horwitz B. (1998). Integrating electrophysiological and anatomical experimental data to create a large-scale model that simulates a delayed match-to-sample human brain imaging study. Cerebral cortex (New York, N.Y. : 1991). 8 [PubMed]
Ulloa A et al. (2008). Neural mechanisms of auditory discrimination of long-duration tonal patterns: a neural modeling and fMRI study. Journal of integrative neuroscience. 7 [PubMed]
Ungerleider LG, Horwitz B, Rapoport SI, Haxby JV, Grady CL. (1995). Hemispheric differences in neural systems for face working memory: a PET rCBF study Hum Brain Mapp. 3
Ungerleider LG, Mishkin M. (1982). Two cortical visual systems Analysis of Visual Behavior.
Wilson HR, Cowan JD. (1972). Excitatory and inhibitory interactions in localized populations of model neurons. Biophysical journal. 12 [PubMed]
van Dellen E et al. (2013). Local polymorphic delta activity in cortical lesions causes global decreases in functional connectivity. NeuroImage. 83 [PubMed]
Aertsen AM, Gerstein GL, Habib MK, Palm G. (1989). Dynamics of neuronal firing correlation: modulation of "effective connectivity". Journal of neurophysiology. 61 [PubMed]
Anderson JR, Qin Y, Sohn MH, Stenger VA, Carter CS. (2003). An information-processing model of the BOLD response in symbol manipulation tasks. Psychonomic bulletin & review. 10 [PubMed]
Bandettini PA. (2003). Functional MRI Handbook of neuropsychology. 9
Bartlett EJ, Brown JW, Wolf AP, Brodie JD. (1987). Correlations between glucose metabolic rates in brain regions of healthy male adults at rest and during language stimulation. Brain and language. 32 [PubMed]
Biswal B, Yetkin FZ, Haughton VM, Hyde JS. (1995). Functional connectivity in the motor cortex of resting human brain using echo-planar MRI. Magnetic resonance in medicine. 34 [PubMed]
Bodner M, Kroger J, Fuster JM. (1996). Auditory memory cells in dorsolateral prefrontal cortex. Neuroreport. 7 [PubMed]
Bohning DE et al. (2000). BOLD-f MRI response to single-pulse transcranial magnetic stimulation (TMS). Journal of magnetic resonance imaging : JMRI. 11 [PubMed]
Bokde AL, Tagamets MA, Friedman RB, Horwitz B. (2001). Functional interactions of the inferior frontal cortex during the processing of words and word-like stimuli. Neuron. 30 [PubMed]
Breakspear M. (2004). "Dynamic" connectivity in neural systems: theoretical and empirical considerations. Neuroinformatics. 2 [PubMed]
Bullmore E et al. (2000). How good is good enough in path analysis of fMRI data? NeuroImage. 11 [PubMed]
Bullmore ET et al. (1996). Functional magnetic resonance image analysis of a large-scale neurocognitive network. NeuroImage. 4 [PubMed]
Buxton RB, Wong EC, Frank LR. (1998). Dynamics of blood flow and oxygenation changes during brain activation: the balloon model. Magnetic resonance in medicine. 39 [PubMed]
Büchel C, Friston KJ. (1997). Modulation of connectivity in visual pathways by attention: cortical interactions evaluated with structural equation modelling and fMRI. Cerebral cortex (New York, N.Y. : 1991). 7 [PubMed]
Deco G, Rolls ET, Horwitz B. (2004). "What" and "where" in visual working memory: a computational neurodynamical perspective for integrating FMRI and single-neuron data. Journal of cognitive neuroscience. 16 [PubMed]
Fox P et al. (1997). Imaging human intra-cerebral connectivity by PET during TMS. Neuroreport. 8 [PubMed]
Friston KJ. (1994). Functional and effective connectivity in neuroimaging: a synthesis Hum. Brain Mapp. 2
Friston KJ, Frith CD, Liddle PF, Frackowiak RS. (1993). Functional connectivity: the principal-component analysis of large (PET) data sets. Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. 13 [PubMed]
Friston KJ, Harrison L, Penny W. (2003). Dynamic causal modelling. NeuroImage. 19 [PubMed]
Friston KJ, Mechelli A, Turner R, Price CJ. (2000). Nonlinear responses in fMRI: the Balloon model, Volterra kernels, and other hemodynamics. NeuroImage. 12 [PubMed]
Funahashi S, Chafee MV, Goldman-Rakic PS. (1993). Prefrontal neuronal activity in rhesus monkeys performing a delayed anti-saccade task. Nature. 365 [PubMed]
Fuster JM. (2000). The module: crisis of a paradigm (review of the New cognitive neurosciences, 2nd edn, ed. Gazzaniga MS ) Neuron. 26
Gitelman DR, Penny WD, Ashburner J, Friston KJ. (2003). Modeling regional and psychophysiologic interactions in fMRI: the importance of hemodynamic deconvolution. NeuroImage. 19 [PubMed]
Glabus MF et al. (2003). Interindividual differences in functional interactions among prefrontal, parietal and parahippocampal regions during working memory. Cerebral cortex (New York, N.Y. : 1991). 13 [PubMed]
Goebel R, Roebroeck A, Kim DS, Formisano E. (2003). Investigating directed cortical interactions in time-resolved fMRI data using vector autoregressive modeling and Granger causality mapping. Magnetic resonance imaging. 21 [PubMed]
Gonçalves MS, Hall DA, Johnsrude IS, Haggard MP. (2001). Can meaningful effective connectivities be obtained between auditory cortical regions? NeuroImage. 14 [PubMed]
Grady CL, Furey ML, Pietrini P, Horwitz B, Rapoport SI. (2001). Altered brain functional connectivity and impaired short-term memory in Alzheimer's disease. Brain : a journal of neurology. 124 [PubMed]
Grafton ST, Sutton J, Couldwell W, Lew M, Waterm C. (1994). Network analysis of motor system connectivity in Parkinsons’s disease: modulation of thalamocortical interactions after pallidoctomy Hum. Brain Mapp.. 2
Hampson M, Peterson BS, Skudlarski P, Gatenby JC, Gore JC. (2002). Detection of functional connectivity using temporal correlations in MR images. Human brain mapping. 15 [PubMed]
Horwitz B. (1994). Data analysis paradigms for metabolic-flow data: combining neural modeling and functional neuroimaging Hum. Brain Mapp.. 2
Horwitz B. (2003). The elusive concept of brain connectivity. NeuroImage. 19 [PubMed]
Horwitz B. (2004). Relating fMRI and PET signals to neural activity by means of large-scale neural models. Neuroinformatics. 2 [PubMed]
Horwitz B, Duara R, Rapoport SI. (1984). Intercorrelations of glucose metabolic rates between brain regions: application to healthy males in a state of reduced sensory input. Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. 4 [PubMed]
Horwitz B, Duara R, Rapoport SI. (1986). Age differences in intercorrelations between regional cerebral metabolic rates for glucose. Annals of neurology. 19 [PubMed]
Horwitz B, Friston KJ, Taylor JG. (2000). Neural modeling and functional brain imaging: an overview. Neural networks : the official journal of the International Neural Network Society. 13 [PubMed]
Horwitz B et al. (1992). Functional Associations among Human Posterior Extrastriate Brain Regions during Object and Spatial Vision. Journal of cognitive neuroscience. 4 [PubMed]
Horwitz B, Haxby JV, Soncrant TT. (1992). Covariance analysis of functional interactions in the brain using metabolic and blood flow data Advances in metabolic mapping techniques for brain imaging of behavioral and learning functions .
Horwitz B et al. (1995). Network analysis of PET-mapped visual pathways in Alzheimer type dementia. Neuroreport. 6 [PubMed]
Horwitz B, Rumsey JM, Donohue BC. (1998). Functional connectivity of the angular gyrus in normal reading and dyslexia. Proceedings of the National Academy of Sciences of the United States of America. 95 [PubMed]
Horwitz B, Tagamets MA. (1999). Predicting human functional maps with neural net modeling. Human brain mapping. 8 [PubMed]
Horwitz B, Tagamets MA, McIntosh AR. (1999). Neural modeling, functional brain imaging, and cognition. Trends in cognitive sciences. 3 [PubMed]
Husain FT et al. (2002). Simulating transcranial magnetic stimulation during PET with a large-scale neural network model of the prefrontal cortex and the visual system. NeuroImage. 15 [PubMed]
Husain FT, Tagamets MA, Fromm SJ, Braun AR, Horwitz B. (2004). Relating neuronal dynamics for auditory object processing to neuroimaging activity: a computational modeling and an fMRI study. NeuroImage. 21 [PubMed]
Jennings JM, McIntosh AR, Kapur S. (1998). Mapping neural interactivity onto regional activity: an analysis of semantic processing and response mode interactions. NeuroImage. 7 [PubMed]
Jueptner M, Weiller C. (1995). Review: does measurement of regional cerebral blood flow reflect synaptic activity? Implications for PET and fMRI. NeuroImage. 2 [PubMed]
Kikuchi-Yorioka Y, Sawaguchi T. (2000). Parallel visuospatial and audiospatial working memory processes in the monkey dorsolateral prefrontal cortex. Nature neuroscience. 3 [PubMed]
Lahaye PJ, Poline JB, Flandin G, Dodel S, Garnero L. (2003). Functional connectivity: studying nonlinear, delayed interactions between BOLD signals. NeuroImage. 20 [PubMed]
Lauritzen M. (2001). Relationship of spikes, synaptic activity, and local changes of cerebral blood flow. Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. 21 [PubMed]
Lee L, Harrison LM, Mechelli A. (2003). A report of the functional connectivity workshop, Dusseldorf 2002. NeuroImage. 19 [PubMed]
Li X et al. (2004). Interleaved transcranial magnetic stimulation/functional MRI confirms that lamotrigine inhibits cortical excitability in healthy young men. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 29 [PubMed]
Logothetis NK. (2003). MR imaging in the non-human primate: studies of function and of dynamic connectivity. Current opinion in neurobiology. 13 [PubMed]
Logothetis NK, Pauls J, Augath M, Trinath T, Oeltermann A. (2001). Neurophysiological investigation of the basis of the fMRI signal. Nature. 412 [PubMed]
McIntosh AR. (2000). Towards a network theory of cognition. Neural networks : the official journal of the International Neural Network Society. 13 [PubMed]
McIntosh AR, Bookstein FL, Haxby JV, Grady CL. (1996). Spatial pattern analysis of functional brain images using partial least squares. NeuroImage. 3 [PubMed]
McIntosh AR, Gonzalez-Lima F. (1991). Structural modeling of functional neural pathways mapped with 2-deoxyglucose: effects of acoustic startle habituation on the auditory system. Brain research. 547 [PubMed]
McIntosh AR, Gonzalez-Lima F. (1994). Structural equation modeling and its application to network analysis in functional brain imaging Hum. Brain Mapp.. 2
McIntosh AR, Grady CL, Haxby JV, Ungerleider LG, Horwitz B. (1996). Changes in limbic and prefrontal functional interactions in a working memory task for faces. Cerebral cortex (New York, N.Y. : 1991). 6 [PubMed]
McIntosh AR et al. (1994). Network analysis of cortical visual pathways mapped with PET. The Journal of neuroscience : the official journal of the Society for Neuroscience. 14 [PubMed]
McIntosh AR, Rajah MN, Lobaugh NJ. (1999). Interactions of prefrontal cortex in relation to awareness in sensory learning. Science (New York, N.Y.). 284 [PubMed]
Mesulam MM. (1990). Large-scale neurocognitive networks and distributed processing for attention, language, and memory. Annals of neurology. 28 [PubMed]
Mottaghy FM et al. (2000). Modulation of the neuronal circuitry subserving working memory in healthy human subjects by repetitive transcranial magnetic stimulation. Neuroscience letters. 280 [PubMed]
Nicolelis MA, Baccala LA, Lin RC, Chapin JK. (1995). Sensorimotor encoding by synchronous neural ensemble activity at multiple levels of the somatosensory system. Science (New York, N.Y.). 268 [PubMed]
Paus T et al. (1998). Dose-dependent reduction of cerebral blood flow during rapid-rate transcranial magnetic stimulation of the human sensorimotor cortex. Journal of neurophysiology. 79 [PubMed]
Pugh KR et al. (2000). The angular gyrus in developmental dyslexia: task-specific differences in functional connectivity within posterior cortex. Psychological science. 11 [PubMed]
Rauschecker JP, Tian B. (2000). Mechanisms and streams for processing of "what" and "where" in auditory cortex. Proceedings of the National Academy of Sciences of the United States of America. 97 [PubMed]
Roebroeck A, Formisano E, Goebel R. (2005). Mapping directed influence over the brain using Granger causality and fMRI. NeuroImage. 25 [PubMed]
Rowe J et al. (2002). Attention to action in Parkinson's disease: impaired effective connectivity among frontal cortical regions. Brain : a journal of neurology. 125 [PubMed]
Rowe JB, Stephan KE, Friston K, Frackowiak RS, Passingham RE. (2005). The prefrontal cortex shows context-specific changes in effective connectivity to motor or visual cortex during the selection of action or colour. Cerebral cortex (New York, N.Y. : 1991). 15 [PubMed]
Siebner HR, Lee L, Bestmann S. (2003). Interleaving TMS with functional MRI: now that it is technically feasible how should it be used? Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. 114 [PubMed]
Tagamets MA, Horwitz B. (1998). Integrating electrophysiological and anatomical experimental data to create a large-scale model that simulates a delayed match-to-sample human brain imaging study. Cerebral cortex (New York, N.Y. : 1991). 8 [PubMed]
Tagamets MA, Horwitz B. (2001). Interpreting PET and fMRI measures of functional neural activity: the effects of synaptic inhibition on cortical activation in human imaging studies. Brain research bulletin. 54 [PubMed]
Toni I, Rowe J, Stephan KE, Passingham RE. (2002). Changes of cortico-striatal effective connectivity during visuomotor learning. Cerebral cortex (New York, N.Y. : 1991). 12 [PubMed]
Ts'o DY, Gilbert CD, Wiesel TN. (1986). Relationships between horizontal interactions and functional architecture in cat striate cortex as revealed by cross-correlation analysis. The Journal of neuroscience : the official journal of the Society for Neuroscience. 6 [PubMed]
Wilson HR, Cowan JD. (1972). Excitatory and inhibitory interactions in localized populations of model neurons. Biophysical journal. 12 [PubMed]
Wilson MA, McNaughton BL. (1994). Reactivation of hippocampal ensemble memories during sleep. Science (New York, N.Y.). 265 [PubMed]
Wrenn K, Lorenzen B, Jones I, Zhou C, Aronsky D. (2010). Factors affecting stress in emergency medicine residents while working in the ED. The American journal of emergency medicine. 28 [PubMed]
Edin F, Klingberg T, Stödberg T, Tegnér J. (2007). Fronto-parietal connection asymmetry regulates working memory distractibility. Journal of integrative neuroscience. 6 [PubMed]
Ulloa A, Horwitz B. (2016). Embedding Task-Based Neural Models into a Connectome-Based Model of the Cerebral Cortex. Frontiers in neuroinformatics. 10 [PubMed]