This code has some accurate morphological models of L2/3 neurons recorded in slices from mouse cortex. The paper it's related to aimed to understand how dendritic morphology (branching structure) affected action potential backpropagation and calcium signaling in dendrites, and that's what this code allows you to study. https://github.com/landoskape/landau-2022
Experimental motivation: Understand how cable properties affect AP amplitude and calcium conductances.
Model Type: Dendrite
Region(s) or Organism(s): Mouse; Neocortex
Cell Type(s): Neocortex L2/3 pyramidal GLU cell
Receptors:
Genes:
Transmitters:
Model Concept(s): Action Potentials; Active Dendrites; Influence of Dendritic Geometry
Simulation Environment: NEURON
References:
Landau AT et al. (2022). Dendritic branch structure compartmentalizes voltage-dependent calcium influx in cortical layer 2/3 pyramidal cells. eLife. 11 [PubMed]