Glutamate diffusion and AMPA receptor activation in the cerebellar glomerulus (Saftenku 2005)


Saftenku EE. (2005). Modeling of slow glutamate diffusion and AMPA receptor activation in the cerebellar glomerulus. Journal of theoretical biology. 234 [PubMed]

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References and models cited by this paper

Armano S, Rossi P, Taglietti V, D'Angelo E. (2000). Long-term potentiation of intrinsic excitability at the mossy fiber-granule cell synapse of rat cerebellum. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

Barbour B. (2001). An evaluation of synapse independence. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Barbour B, Keller BU, Llano I, Marty A. (1994). Prolonged presence of glutamate during excitatory synaptic transmission to cerebellar Purkinje cells. Neuron. 12 [PubMed]

Bellingham MC, Walmsley B. (1999). A novel presynaptic inhibitory mechanism underlies paired pulse depression at a fast central synapse. Neuron. 23 [PubMed]

Burger PM et al. (1989). Synaptic vesicles immunoisolated from rat cerebral cortex contain high levels of glutamate. Neuron. 3 [PubMed]

Caspi A, Granek R, Elbaum M. (2000). Enhanced diffusion in active intracellular transport. Physical review letters. 85 [PubMed]

Cathala L, Brickley S, Cull-Candy S, Farrant M. (2003). Maturation of EPSCs and intrinsic membrane properties enhances precision at a cerebellar synapse. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

DiGregorio DA, Nusser Z, Silver RA. (2002). Spillover of glutamate onto synaptic AMPA receptors enhances fast transmission at a cerebellar synapse. Neuron. 35 [PubMed]

Diamond JS, Jahr CE. (1997). Transporters buffer synaptically released glutamate on a submillisecond time scale. The Journal of neuroscience : the official journal of the Society for Neuroscience. 17 [PubMed]

Egelman DM, Montague PR. (1999). Calcium dynamics in the extracellular space of mammalian neural tissue. Biophysical journal. 76 [PubMed]

Ellis RJ. (2001). Macromolecular crowding: obvious but underappreciated. Trends in biochemical sciences. 26 [PubMed]

Franks KM, Bartol TM, Sejnowski TJ. (2002). A Monte Carlo model reveals independent signaling at central glutamatergic synapses. Biophysical journal. 83 [PubMed]

Hanse E, Gustafsson B. (2001). Paired-pulse plasticity at the single release site level: an experimental and computational study. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Hille B. (1992). Potassium channels and chloride channels Ionic Channels of Excitable Membrane.

Häusser M, Roth A. (1997). Dendritic and somatic glutamate receptor channels in rat cerebellar Purkinje cells. The Journal of physiology. 501 ( Pt 1) [PubMed]

Jakab RL, Hámori J. (1988). Quantitative morphology and synaptology of cerebellar glomeruli in the rat. Anatomy and embryology. 179 [PubMed]

Jonas P, Major G, Sakmann B. (1993). Quantal components of unitary EPSCs at the mossy fibre synapse on CA3 pyramidal cells of rat hippocampus. The Journal of physiology. 472 [PubMed]

Kleinle J et al. (1996). Transmitter concentration profiles in the synaptic cleft: an analytical model of release and diffusion. Biophys J. 71

Korn H, Charpier S, Faber DS, Legendre P, Sur C. (1994). The one-vesicle hypothesis and multivesicular release Molecular and Cellular Mechanisms of Neurotransmitter Release.

Landis DM, Weinstein LA, Halperin JJ. (1983). Development of synaptic junctions in cerebellar glomeruli. Brain research. 284 [PubMed]

Longone P, Impagnatiello F, Mienville JM, Costa E, Guidotti A. (1998). Changes in AMPA receptor-spliced variant expression and shift in AMPA receptor spontaneous desensitization pharmacology during cerebellar granule cell maturation in vitro. Journal of molecular neuroscience : MN. 11 [PubMed]

Longsworth L. (1953). Diffusion measurements, at 251,of aqueous solutions of amino acids, peptides and sugars. J Am Chem Soc. 75

Marienhagen J, Keller BU, Zippelius A. (1997). Kinetic model of excitatory synaptic transmission to cerebellar Purkinje cells. Journal of theoretical biology. 188 [PubMed]

Mathews J, Walker RL. (1964). Mathematical Methods of Physics (2nd ed).

Matveev V, Wang XJ. (2000). Implications of all-or-none synaptic transmission and short-term depression beyond vesicle depletion: a computational study. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

Metzler R, Klafter J. (2004). The restaurant at the end of random walk: recent developments in the description of anomalous transport by fractional dynamics J Phys A: Math Gen. 37

Mitchell SJ, Silver RA. (2000). Glutamate spillover suppresses inhibition by activating presynaptic mGluRs. Nature. 404 [PubMed]

Mosbacher J et al. (1994). A molecular determinant for submillisecond desensitization in glutamate receptors. Science (New York, N.Y.). 266 [PubMed]

Neher E, Sakaba T. (2001). Combining deconvolution and noise analysis for the estimation of transmitter release rates at the calyx of held. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Nicholson C, Syková E. (1998). Extracellular space structure revealed by diffusion analysis. Trends in neurosciences. 21 [PubMed]

Nielsen TA, DiGregorio DA, Silver RA. (2004). Modulation of glutamate mobility reveals the mechanism underlying slow-rising AMPAR EPSCs and the diffusion coefficient in the synaptic cleft. Neuron. 42 [PubMed]

Otis TS, Wu YC, Trussell LO. (1996). Delayed clearance of transmitter and the role of glutamate transporters at synapses with multiple release sites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 16 [PubMed]

Overstreet LS, Kinney GA, Liu YB, Billups D, Slater NT. (1999). Glutamate transporters contribute to the time course of synaptic transmission in cerebellar granule cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

Palay SL, Chan-palay V. (1974). Cerebellar Cortex Cytology And Organization.

Petralia RS, Wang YX, Wenthold RJ. (2002). NMDA receptors and PSD-95 are found in attachment plaques in cerebellar granular layer glomeruli. The European journal of neuroscience. 15 [PubMed]

Press WH, Teukolsky SA, Flannery BP, Vellerling WT. (1992). Numerical Recipes In C: The Art Of Scientific Computing.

Qin F, Auerbach A, Sachs F. (1996). Estimating single-channel kinetic parameters from idealized patch-clamp data containing missed events. Biophysical journal. 70 [PubMed]

Raman IM, Trussell LO. (1995). The mechanism of alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionate receptor desensitization after removal of glutamate. Biophysical journal. 68 [PubMed]

Riveros N, Fiedler J, Lagos N, Muñoz C, Orrego F. (1986). Glutamate in rat brain cortex synaptic vesicles: influence of the vesicle isolation procedure. Brain research. 386 [PubMed]

Rose O, Grund C, Reinhardt S, Starzinski-Powitz A, Franke WW. (1995). Contactus adherens, a special type of plaque-bearing adhering junction containing M-cadherin, in the granule cell layer of the cerebellar glomerulus. Proceedings of the National Academy of Sciences of the United States of America. 92 [PubMed]

Rossi P et al. (2002). NMDA receptor 2 (NR2) C-terminal control of NR open probability regulates synaptic transmission and plasticity at a cerebellar synapse. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

Rusakov DA. (2001). The role of perisynaptic glial sheaths in glutamate spillover and extracellular Ca(2+) depletion. Biophysical journal. 81 [PubMed]

Rusakov DA, Kullmann DM. (1998). Extrasynaptic glutamate diffusion in the hippocampus: ultrastructural constraints, uptake, and receptor activation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Rusakov DA, Kullmann DM. (1998). Geometric and viscous components of the tortuosity of the extracellular space in the brain. Proceedings of the National Academy of Sciences of the United States of America. 95 [PubMed]

Saxton MJ. (1994). Anomalous diffusion due to obstacles: a Monte Carlo study. Biophysical journal. 66 [PubMed]

Saxton MJ. (1996). Anomalous diffusion due to binding: a Monte Carlo study. Biophysical journal. 70 [PubMed]

Silver RA, Colquhoun D, Cull-Candy SG, Edmonds B. (1996). Deactivation and desensitization of non-NMDA receptors in patches and the time course of EPSCs in rat cerebellar granule cells. The Journal of physiology. 493 ( Pt 1) [PubMed]

Silver RA, Cull-Candy SG, Takahashi T. (1996). Non-NMDA glutamate receptor occupancy and open probability at a rat cerebellar synapse with single and multiple release sites. The Journal of physiology. 494 ( Pt 1) [PubMed]

Silver RA, Sargent PB, Nielsen T, Digregorio DA. (2003). Timecourse of uniquantal release at the cerebellar mossy fiber-granulecell synapse The Society for Neuroscience Annual Meeting.

Sola E, Prestori F, Rossi P, Taglietti V, D'Angelo E. (2004). Increased neurotransmitter release during long-term potentiation at mossy fibre-granule cell synapses in rat cerebellum. The Journal of physiology. 557 [PubMed]

Trommershäuser J, Marienhagen J, Zippelius A. (1999). Stochastic model of central synapses: slow diffusion of transmitter interacting with spatially distributed receptors and transporters. Journal of theoretical biology. 198 [PubMed]

Tsodyks M, Uziel A, Markram H. (2000). Synchrony generation in recurrent networks with frequency-dependent synapses. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

Wadiche JI, Jahr CE. (2001). Multivesicular release at climbing fiber-Purkinje cell synapses. Neuron. 32 [PubMed]

Waldeck RF, Pereda A, Faber DS. (2000). Properties and plasticity of paired-pulse depression at a central synapse. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

Wall MJ, Robert A, Howe JR, Usowicz MM. (2002). The speeding of EPSC kinetics during maturation of a central synapse. The European journal of neuroscience. 15 [PubMed]

Wu XL, Libchaber A. (2000). Particle diffusion in a quasi-two-dimensional bacterial bath. Physical review letters. 84 [PubMed]

Xu-Friedman MA, Regehr WG. (2003). Ultrastructural contributions to desensitization at cerebellar mossy fiber to granule cell synapses. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

References and models that cite this paper

Dangelo E, Nieus T, Bezzi M, Arleo A, Coenen O. (2005). (chapter) Modeling synaptic transmission and quantifying information transfer in the granular layer of the cerebellum Computational Intelligence and Bioinspired Systems, Proceedings. 3512

Nieus T et al. (2006). LTP regulates burst initiation and frequency at mossy fiber-granule cell synapses of rat cerebellum: experimental observations and theoretical predictions. Journal of neurophysiology. 95 [PubMed]

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