Cressman JR, Ullah G, Ziburkus J, Schiff SJ, Barreto E. (2009). The influence of sodium and potassium dynamics on excitability, seizures, and the stability of persistent states: I. Single neuron dynamics. Journal of computational neuroscience. 26 [PubMed]

• Single neuron with dynamic ion concentrations (Cressman et al. 2009) [Model]

Hübel N, Andrew RD, Ullah G. (2016). Large extracellular space leads to neuronal susceptibility to ischemic injury in a Na+/K+ pumps-dependent manner. Journal of computational neuroscience. 40 [PubMed]

• Anoxic depolarization, recovery: effect of brain regions and extracellular space (Hubel et al. 2016) [Model]

Hübel N, Ullah G. (2016). Anions Govern Cell Volume: A Case Study of Relative Astrocytic and Neuronal Swelling in Spreading Depolarization. PloS one. 11 [PubMed]

• An ion-based model for swelling of neurons and astrocytes (Hubel & Ullah 2016) [Model]

Kager H, Wadman WJ, Somjen GG. (2000). Simulated seizures and spreading depression in a neuron model incorporating interstitial space and ion concentrations. Journal of neurophysiology. 84 [PubMed]

Kager H, Wadman WJ, Somjen GG. (2002). Conditions for the triggering of spreading depression studied with computer simulations. Journal of neurophysiology. 88 [PubMed]

Kager H, Wadman WJ, Somjen GG. (2007). Seizure-like afterdischarges simulated in a model neuron. Journal of computational neuroscience. 22 [PubMed]

Lewin N, Aksay E, Clancy CE. (2012). Computational modeling reveals dendritic origins of GABA(A)-mediated excitation in CA1 pyramidal neurons. PloS one. 7 [PubMed]

• Paradoxical GABA-mediated excitation (Lewin et al. 2012) [Model]

Mathias EJ, Plank MJ, David T. (2017). A model of neurovascular coupling and the BOLD response: PART I. Computer methods in biomechanics and biomedical engineering. 20 [PubMed]

• A model of neurovascular coupling and the BOLD response (Mathias et al 2017, Kenny et al 2018) [Model]

Park EH, Barreto E, Gluckman BJ, Schiff SJ, So P. (2005). A model of the effects of applied electric fields on neuronal synchronization. Journal of computational neuroscience. 19 [PubMed]

Somjen GG. (2001). Mechanisms of spreading depression and hypoxic spreading depression-like depolarization. Physiological reviews. 81 [PubMed]

Ullah G, Cressman JR, Barreto E, Schiff SJ. (2009). The influence of sodium and potassium dynamics on excitability, seizures, and the stability of persistent states. II. Network and glial dynamics. Journal of computational neuroscience. 26 [PubMed]

• Network model with dynamic ion concentrations (Ullah et al. 2009) [Model]