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• LIP and FEF rhythmic attention model (Aussel et al. 2023) [Model]

Calì C et al. (2008). Inferring connection proximity in networks of electrically coupled cells by subthreshold frequency response analysis. Journal of computational neuroscience. 24 [PubMed]

• Inferring connection proximity in electrically coupled networks (Cali et al. 2007) [Model]

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• An electrophysiological model of GABAergic double bouquet cells (Chrysanthidis et al. 2019) [Model]

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• Shaping NMDA spikes by timed synaptic inhibition on L5PC (Doron et al. 2017) [Model]

Esposito U, Giugliano M, Vasilaki E. (2014). Adaptation of short-term plasticity parameters via error-driven learning may explain the correlation between activity-dependent synaptic properties, connectivity motifs and target specificity. Frontiers in computational neuroscience. 8 [PubMed]

• Adaptation of Short-Term Plasticity parameters (Esposito et al. 2015) [Model]

Esposito U, Giugliano M, van Rossum M, Vasilaki E. (2014). Measuring symmetry, asymmetry and randomness in neural network connectivity. PloS one. 9 [PubMed]

• Statistics of symmetry measure for networks of neurons (Esposito et al. 2014) [Model]

Fiebig F, Lansner A. (2017). A Spiking Working Memory Model Based on Hebbian Short-Term Potentiation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37 [PubMed]

Gal E et al. (2017). Rich cell-type-specific network topology in neocortical microcircuitry. Nature neuroscience. 20 [PubMed]

• The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Gidon A, Segev I. (2012). Principles governing the operation of synaptic inhibition in dendrites. Neuron. 75 [PubMed]

• Principles governing the operation of synaptic inhibition in dendrites (Gidon & Segev 2012) [Model]

Hass J, Hertäg L, Durstewitz D. (2016). A Detailed Data-Driven Network Model of Prefrontal Cortex Reproduces Key Features of In Vivo Activity. PLoS computational biology. 12 [PubMed]

• A detailed data-driven network model of prefrontal cortex (Hass et al 2016) [Model]

Hay E, Segev I. (2015). Dendritic Excitability and Gain Control in Recurrent Cortical Microcircuits. Cerebral cortex (New York, N.Y. : 1991). 25 [PubMed]

• Microcircuits of L5 thick tufted pyramidal cells (Hay & Segev 2015) [Model]
• Layer V pyramidal cell model with reduced morphology (Mäki-Marttunen et al 2018) [Model]

Hayut I, Fanselow EE, Connors BW, Golomb D. (2011). LTS and FS inhibitory interneurons, short-term synaptic plasticity, and cortical circuit dynamics. PLoS computational biology. 7 [PubMed]

• Rate model of a cortical RS-FS-LTS network (Hayut et al. 2011) [Model]

Kubota Y et al. (2015). Functional effects of distinct innervation styles of pyramidal cells by fast spiking cortical interneurons. eLife. 4 [PubMed]

• A Layer V CCS type pyramidal cell, inhibitory synapse current conduction (Kubota Y et al., 2015) [Model]

Linaro D, Ocker GK, Doiron B, Giugliano M. (2019). Correlation Transfer by Layer 5 Cortical Neurons Under Recreated Synaptic Inputs In Vitro. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]

• L5 cortical neurons with recreated synaptic inputs in vitro correlation transfer (Linaro et al 2019) [Model]

Linaro D, Storace M, Giugliano M. (2011). Accurate and fast simulation of channel noise in conductance-based model neurons by diffusion approximation. PLoS computational biology. 7 [PubMed]

• Accurate and fast simulation of channel noise in conductance-based model neurons (Linaro et al 2011) [Model]

Markram H et al. (2015). Reconstruction and Simulation of Neocortical Microcircuitry. Cell. 163 [PubMed]

• The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Morita K. (2008). Possible role of dendritic compartmentalization in the spatial working memory circuit. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

• Working memory circuit with branched dendrites (Morita 2008) [Model]

Parekh R, Ascoli GA. (2013). Neuronal morphology goes digital: a research hub for cellular and system neuroscience. Neuron. 77 [PubMed]

• Neuronal morphology goes digital ... (Parekh & Ascoli 2013) [Model]

Potjans TC, Diesmann M. (2014). The cell-type specific cortical microcircuit: relating structure and activity in a full-scale spiking network model. Cerebral cortex (New York, N.Y. : 1991). 24 [PubMed]

• A full-scale cortical microcircuit spiking network model (Shimoura et al 2018) [Model]

Ramaswamy S et al. (2015). The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex. Frontiers in neural circuits. 9 [PubMed]

• The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Reimann MW, Horlemann AL, Ramaswamy S, Muller EB, Markram H. (2017). Morphological Diversity Strongly Constrains Synaptic Connectivity and Plasticity. Cerebral cortex (New York, N.Y. : 1991). 27 [PubMed]

• The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Reimann MW, King JG, Muller EB, Ramaswamy S, Markram H. (2015). An algorithm to predict the connectome of neural microcircuits. Frontiers in computational neuroscience. 9 [PubMed]

• The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Schulz JM, Knoflach F, Hernandez MC, Bischofberger J. (2018). Dendrite-targeting interneurons control synaptic NMDA-receptor activation via nonlinear a5-GABAA receptors. Nature communications. 9 [PubMed]

• CA1 pyramidal neuron: nonlinear a5-GABAAR controls synaptic NMDAR activation (Schulz et al 2018) [Model]
• Single compartment: nonlinear a5-GABAAR controls synaptic NMDAR activation (Schulz et al 2018) [Model]

Vasilaki E, Giugliano M. (2014). Emergence of connectivity motifs in networks of model neurons with short- and long-term plastic synapses. PloS one. 9 [PubMed]

• Emergence of Connectivity Motifs in Networks of Model Neurons (Vasilaki, Giugliano 2014) [Model]

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• Engaging distinct oscillatory neocortical circuits (Vierling-Claassen et al. 2010) [Model]

Yang GR, Murray JD, Wang XJ. (2016). A dendritic disinhibitory circuit mechanism for pathway-specific gating. Nature communications. 7 [PubMed]

• A dendritic disinhibitory circuit mechanism for pathway-specific gating (Yang et al. 2016) [Model]