Half-center oscillator database of leech heart interneuron model (Doloc-Mihu & Calabrese 2011)

Bhalla US, Bower JM. (1993). Exploring parameter space in detailed single neuron models: simulations of the mitral and granule cells of the olfactory bulb. Journal of neurophysiology. 69 [PubMed]

• Olfactory Mitral Cell (Bhalla, Bower 1993) [Model]
• Granule Cells of the Olfactory Bulb (Simoes_De_Souza et al. 2014) [Model]

Calin-Jageman RJ, Tunstall MJ, Mensh BD, Katz PS, Frost WN. (2007). Parameter space analysis suggests multi-site plasticity contributes to motor pattern initiation in Tritonia. Journal of neurophysiology. 98 [PubMed]

• Updated Tritonia Swim CPG (Calin-Jagemann et al. 2007) [Model]

Cymbalyuk GS, Gaudry Q, Masino MA, Calabrese RL. (2002). Bursting in leech heart interneurons: cell-autonomous and network-based mechanisms. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

De Schutter E, Ekeberg O, Kotaleski JH, Achard P, Lansner A. (2005). Biophysically detailed modelling of microcircuits and beyond. Trends in neurosciences. 28 [PubMed]

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• Globus pallidus multi-compartmental model neuron with realistic morphology (Gunay et al. 2008) [Model]

Günay C et al. (2009). Database analysis of simulated and recorded electrophysiological datasets with PANDORA's toolbox. Neuroinformatics. 7 [PubMed]

HODGKIN AL, HUXLEY AF. (1952). A quantitative description of membrane current and its application to conduction and excitation in nerve. The Journal of physiology. 117 [PubMed]

• Squid axon (Hodgkin, Huxley 1952) (NEURON) [Model]
• Squid axon (Hodgkin, Huxley 1952) (SNNAP) [Model]
• Squid axon (Hodgkin, Huxley 1952) (LabAXON) [Model]
• Squid axon (Hodgkin, Huxley 1952) (SBML, XPP, other) [Model]
• Squid axon (Hodgkin, Huxley 1952) used in (Chen et al 2010) (R language) [Model]

Hill AA, Lu J, Masino MA, Olsen OH, Calabrese RL. (2001). A model of a segmental oscillator in the leech heartbeat neuronal network. Journal of computational neuroscience. 10 [PubMed]

• Leech heart interneuron network model (Hill et al 2001, 2002) [Model]

Kristan WB, Calabrese RL, Friesen WO. (2005). Neuronal control of leech behavior. Progress in neurobiology. 76 [PubMed]

Marder E, Bucher D, Schulz DJ, Taylor AL. (2005). Invertebrate central pattern generation moves along. Current biology : CB. 15 [PubMed]

Marder E, Calabrese RL. (1996). Principles of rhythmic motor pattern generation. Physiological reviews. 76 [PubMed]

Marder E, Goaillard JM. (2006). Variability, compensation and homeostasis in neuron and network function. Nature reviews. Neuroscience. 7 [PubMed]

Olypher AV, Calabrese RL. (2007). Using constraints on neuronal activity to reveal compensatory changes in neuronal parameters. Journal of neurophysiology. 98 [PubMed]

• Activity constraints on stable neuronal or network parameters (Olypher and Calabrese 2007) [Model]

Prinz AA. (2006). Insights from models of rhythmic motor systems. Current opinion in neurobiology. 16 [PubMed]

Prinz AA, Billimoria CP, Marder E. (2003). Alternative to hand-tuning conductance-based models: construction and analysis of databases of model neurons. Journal of neurophysiology. 90 [PubMed]

Prinz AA, Bucher D, Marder E. (2004). Similar network activity from disparate circuit parameters. Nature neuroscience. 7 [PubMed]

• Lobster STG pyloric network model with calcium sensor (Gunay & Prinz 2010) (Prinz et al. 2004) [Model]

Wenning A, Cymbalyuk GS, Calabrese RL. (2004). Heartbeat control in leeches. I. Constriction pattern and neural modulation of blood pressure in intact animals. Journal of neurophysiology. 91 [PubMed]

Carlu M et al. (2020). A mean-field approach to the dynamics of networks of complex neurons, from nonlinear Integrate-and-Fire to Hodgkin-Huxley models. Journal of neurophysiology. 123 [PubMed]

• Mean field model for Hodgkin Huxley networks of neurons (Carlu et al 2020) [Model]

Geminiani A et al. (2018). Complex Dynamics in Simplified Neuronal Models: Reproducing Golgi Cell Electroresponsiveness. Frontiers in neuroinformatics. 12 [PubMed]

• Complex dynamics: reproducing Golgi cell electroresponsiveness (Geminiani et al 2018, 2019ab) [Model]

Günay C, Doloc-Mihu A, Lamb DG, Calabrese RL. (2019). Synaptic Strengths Dominate Phasing of Motor Circuit: Intrinsic Conductances of Neuron Types Need Not Vary across Animals. eNeuro. 6 [PubMed]

• Synaptic strengths are critical in creating the proper output phasing in a CPG (Gunay et al 2019) [Model]

Neymotin SA et al. (2017). Optimizing computer models of corticospinal neurons to replicate in vitro dynamics. Journal of neurophysiology. 117 [PubMed]

• Computer models of corticospinal neurons replicate in vitro dynamics (Neymotin et al. 2017) [Model]