Dendritic spine geometry, spine apparatus organization: spatiotemporal Ca dynamics (Bell et al 2019)


Bell M, Bartol T, Sejnowski T, Rangamani P. (2019). Dendritic spine geometry and spine apparatus organization govern the spatiotemporal dynamics of calcium. The Journal of general physiology. 151 [PubMed]

See more from authors: Bell M · Bartol T · Sejnowski T · Rangamani P

References and models cited by this paper

Jaffe DB, Fisher SA, Brown TH. (1994). Confocal laser scanning microscopy reveals voltage-gated calcium signals within hippocampal dendritic spines. Journal of neurobiology. 25 [PubMed]

Jahr CE, Stevens CF. (1993). Calcium permeability of the N-methyl-D-aspartate receptor channel in hippocampal neurons in culture. Proceedings of the National Academy of Sciences of the United States of America. 90 [PubMed]

Jedlicka P, Vlachos A, Schwarzacher SW, Deller T. (2008). A role for the spine apparatus in LTP and spatial learning. Behavioural brain research. 192 [PubMed]

Kasai H, Fukuda M, Watanabe S, Hayashi-Takagi A, Noguchi J. (2010). Structural dynamics of dendritic spines in memory and cognition. Trends in neurosciences. 33 [PubMed]

Keener J, Sneyd J. (1998). Mathematical Physiology Interdisciplinary Applied Mathematics. 8

Knott GW, Holtmaat A, Wilbrecht L, Welker E, Svoboda K. (2006). Spine growth precedes synapse formation in the adult neocortex in vivo. Nature neuroscience. 9 [PubMed]

Koch C, Zador A. (1993). The function of dendritic spines: devices subserving biochemical rather than electrical compartmentalization. The Journal of neuroscience : the official journal of the Society for Neuroscience. 13 [PubMed]

Kotaleski JH, Blackwell KT. (2010). Modelling the molecular mechanisms of synaptic plasticity using systems biology approaches. Nature reviews. Neuroscience. 11 [PubMed]

Kuwajima M, Spacek J, Harris KM. (2013). Beyond counts and shapes: studying pathology of dendritic spines in the context of the surrounding neuropil through serial section electron microscopy. Neuroscience. 251 [PubMed]

Lee KF, Soares C, Béïque JC. (2012). Examining form and function of dendritic spines. Neural plasticity. 2012 [PubMed]

Lee MC, Yasuda R, Ehlers MD. (2010). Metaplasticity at single glutamatergic synapses. Neuron. 66 [PubMed]

Lee SJ, Escobedo-Lozoya Y, Szatmari EM, Yasuda R. (2009). Activation of CaMKII in single dendritic spines during long-term potentiation. Nature. 458 [PubMed]

Loewenstein Y, Sompolinsky H. (2003). Temporal integration by calcium dynamics in a model neuron. Nature neuroscience. 6 [PubMed]

Majewska A, Tashiro A, Yuste R. (2000). Regulation of spine calcium dynamics by rapid spine motility. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

Malenka RC, Kauer JA, Zucker RS, Nicoll RA. (1988). Postsynaptic calcium is sufficient for potentiation of hippocampal synaptic transmission. Science (New York, N.Y.). 242 [PubMed]

Matsuzaki M et al. (2001). Dendritic spine geometry is critical for AMPA receptor expression in hippocampal CA1 pyramidal neurons. Nature neuroscience. 4 [PubMed]

Matthews EA, Dietrich D. (2015). Buffer mobility and the regulation of neuronal calcium domains. Frontiers in cellular neuroscience. 9 [PubMed]

Matthews EA, Schoch S, Dietrich D. (2013). Tuning local calcium availability: cell-type-specific immobile calcium buffer capacity in hippocampal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

Mattson MP et al. (2000). Calcium signaling in the ER: its role in neuronal plasticity and neurodegenerative disorders. Trends in neurosciences. 23 [PubMed]

Maurya MR, Subramaniam S. (2007). A kinetic model for calcium dynamics in RAW 264.7 cells: 1. Mechanisms, parameters, and subpopulational variability. Biophysical journal. 93 [PubMed]

Means S et al. (2006). Reaction diffusion modeling of calcium dynamics with realistic ER geometry. Biophysical journal. 91 [PubMed]

Miermans CA, Kusters RP, Hoogenraad CC, Storm C. (2017). Biophysical model of the role of actin remodeling on dendritic spine morphology. PloS one. 12 [PubMed]

Murakoshi H, Yasuda R. (2012). Postsynaptic signaling during plasticity of dendritic spines. Trends in neurosciences. 35 [PubMed]

Ngo-Anh TJ et al. (2005). SK channels and NMDA receptors form a Ca2+-mediated feedback loop in dendritic spines. Nature neuroscience. 8 [PubMed]

Nishiyama J, Yasuda R. (2015). Biochemical Computation for Spine Structural Plasticity. Neuron. 87 [PubMed]

Nixon-Abell J et al. (2016). Increased spatiotemporal resolution reveals highly dynamic dense tubular matrices in the peripheral ER. Science (New York, N.Y.). 354 [PubMed]

Noguchi J, Matsuzaki M, Ellis-Davies GC, Kasai H. (2005). Spine-neck geometry determines NMDA receptor-dependent Ca2+ signaling in dendrites. Neuron. 46 [PubMed]

Oertner TG, Matus A. (2005). Calcium regulation of actin dynamics in dendritic spines. Cell calcium. 37 [PubMed]

Ostroff LE et al. (2017). Accumulation of Polyribosomes in Dendritic Spine Heads, But Not Bases and Necks, during Memory Consolidation Depends on Cap-Dependent Translation Initiation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37 [PubMed]

Ouyang Y et al. (2005). Transient decrease in F-actin may be necessary for translocation of proteins into dendritic spines. The European journal of neuroscience. 22 [PubMed]

Paulin JJ et al. (2016). Large and Small Dendritic Spines Serve Different Interacting Functions in Hippocampal Synaptic Plasticity and Homeostasis. Neural plasticity. 2016 [PubMed]

Rackham OJL, Tsaneva-atanasova K, Ganesh A, Mellor JR. (2010). A Ca2+-based computational model for NMDA receptor-dependent synaptic plasticity at individual post-synaptic spines in the hippocampus Front Syn Neurosci. 2

Rangamani P, Levy MG, Khan S, Oster G. (2016). Paradoxical signaling regulates structural plasticity in dendritic spines. Proceedings of the National Academy of Sciences of the United States of America. 113 [PubMed]

Rangamani P, Ohadi D. (2019). Geometric control of frequency modulation of camp oscillations due to ca2+-bursts in dendritic spines Biorxiv.

Rochefort NL, Konnerth A. (2012). Dendritic spines: from structure to in vivo function. EMBO reports. 13 [PubMed]

Sabatini BL, Maravall M, Svoboda K. (2001). Ca(2+) signaling in dendritic spines. Current opinion in neurobiology. 11 [PubMed]

Sabatini BL, Oertner TG, Svoboda K. (2002). The life cycle of Ca(2+) ions in dendritic spines. Neuron. 33 [PubMed]

Sabatini BL, Svoboda K. (2000). Analysis of calcium channels in single spines using optical fluctuation analysis. Nature. 408 [PubMed]

Santamaria F, Wils S, De Schutter E, Augustine GJ. (2006). Anomalous diffusion in Purkinje cell dendrites caused by spines. Neuron. 52 [PubMed]

Schmidt H. (2012). Three functional facets of calbindin D-28k. Frontiers in molecular neuroscience. 5 [PubMed]

Schmidt H, Eilers J. (2009). Spine neck geometry determines spino-dendritic cross-talk in the presence of mobile endogenous calcium binding proteins. Journal of computational neuroscience. 27 [PubMed]

Schmidt H, Kunerth S, Wilms C, Strotmann R, Eilers J. (2007). Spino-dendritic cross-talk in rodent Purkinje neurons mediated by endogenous Ca2+-binding proteins. The Journal of physiology. 581 [PubMed]

Segal M. (2005). Dendritic spines and long-term plasticity. Nature reviews. Neuroscience. 6 [PubMed]

Segal M, Korkotian E. (2014). Endoplasmic reticulum calcium stores in dendritic spines. Frontiers in neuroanatomy. 8 [PubMed]

Segal M, Vlachos A, Korkotian E. (2010). The spine apparatus, synaptopodin, and dendritic spine plasticity. The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry. 16 [PubMed]

Sejnowski TJ. (1977). Statistical constraints on synaptic plasticity. Journal of theoretical biology. 69 [PubMed]

Shouval HZ, Bear MF, Cooper LN. (2002). A unified model of NMDA receptor-dependent bidirectional synaptic plasticity. Proceedings of the National Academy of Sciences of the United States of America. 99 [PubMed]

Siesjö BK. (1990). Calcium in the brain under physiological and pathological conditions. European neurology. 30 Suppl 2 [PubMed]

Song S, Miller KD, Abbott LF. (2000). Competitive Hebbian learning through spike-timing-dependent synaptic plasticity. Nature neuroscience. 3 [PubMed]

Spacek J, Harris KM. (1997). Three-dimensional organization of smooth endoplasmic reticulum in hippocampal CA1 dendrites and dendritic spines of the immature and mature rat. The Journal of neuroscience : the official journal of the Society for Neuroscience. 17 [PubMed]

Standage D, Trappenberg T, Blohm G. (2014). Calcium-dependent calcium decay explains STDP in a dynamic model of hippocampal synapses. PloS one. 9 [PubMed]

Turrigiano G. (2011). Too many cooks? Intrinsic and synaptic homeostatic mechanisms in cortical circuit refinement. Annual review of neuroscience. 34 [PubMed]

Voorsluijs V, Dawson SP, De Decker Y, Dupont G. (2019). Deterministic Limit of Intracellular Calcium Spikes. Physical review letters. 122 [PubMed]

Wacquier B, Combettes L, Van Nhieu GT, Dupont G. (2016). Interplay Between Intracellular Ca(2+) Oscillations and Ca(2+)-stimulated Mitochondrial Metabolism. Scientific reports. 6 [PubMed]

Wilson CJ, Groves PM, Kitai ST, Linder JC. (1983). Three-dimensional structure of dendritic spines in the rat neostriatum. The Journal of neuroscience : the official journal of the Society for Neuroscience. 3 [PubMed]

Wu Y et al. (2017). Contacts between the endoplasmic reticulum and other membranes in neurons. Proceedings of the National Academy of Sciences of the United States of America. 114 [PubMed]

Wuytack F, Raeymaekers L, Missiaen L. (2002). Molecular physiology of the SERCA and SPCA pumps. Cell calcium. 32 [PubMed]

Yasuda H, Barth AL, Stellwagen D, Malenka RC. (2003). A developmental switch in the signaling cascades for LTP induction. Nature neuroscience. 6 [PubMed]

Yasuda R. (2017). Biophysics of Biochemical Signaling in Dendritic Spines: Implications in Synaptic Plasticity. Biophysical journal. 113 [PubMed]

Yasuda R et al. (2004). Imaging calcium concentration dynamics in small neuronal compartments. Science's STKE : signal transduction knowledge environment. 2004 [PubMed]

Yeung LC, Shouval HZ, Blais BS, Cooper LN. (2004). Synaptic homeostasis and input selectivity follow from a calcium-dependent plasticity model. Proceedings of the National Academy of Sciences of the United States of America. 101 [PubMed]

Yuste R. (2010). Dendritic Spines.

Yuste R, Denk W. (1995). Dendritic spines as basic functional units of neuronal integration. Nature. 375 [PubMed]

Yuste R, Majewska A, Holthoff K. (2000). From form to function: calcium compartmentalization in dendritic spines. Nature neuroscience. 3 [PubMed]

Zhang J et al. (2019). Computational modeling reveals frequency modulation of calcium-camp/pka pathway in dendritic spines Biorxiv.

Zhou Q, Sheng M. (2013). NMDA receptors in nervous system diseases. Neuropharmacology. 74 [PubMed]

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