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• A detailed data-driven network model of prefrontal cortex (Hass et al 2016) [Model]

Huang C, Zeldenrust F, Celikel T. (2022). Cortical Representation of Touch in Silico Neuroinformatics. 20 [PubMed]

• Realistic barrel cortical column - Matlab (Huang et al., 2022) [Model]
• Realistic barrel cortical column - NetPyNE (Huang et al., 2022) [Model]

Keane A, Henderson JA, Gong P. (2018). Dynamical patterns underlying response properties of cortical circuits. Journal of the Royal Society, Interface. 15 [PubMed]

• Dynamical patterns underlying response properties of cortical circuits (Keane et al 2018) [Model]

Kubota Y et al. (2015). Functional effects of distinct innervation styles of pyramidal cells by fast spiking cortical interneurons. eLife. 4 [PubMed]

• A Layer V CCS type pyramidal cell, inhibitory synapse current conduction (Kubota Y et al., 2015) [Model]

Lee SH et al. (2014). Parvalbumin-positive basket cells differentiate among hippocampal pyramidal cells. Neuron. 82 [PubMed]

• Parvalbumin-positive basket cells differentiate among hippocampal pyramidal cells (Lee et al. 2014) [Model]

Litwin-Kumar A, Doiron B. (2012). Slow dynamics and high variability in balanced cortical networks with clustered connections. Nature neuroscience. 15 [PubMed]

• Excitatory and inhibitory population activity (Bittner et al 2017) (Litwin-Kumar & Doiron 2017) [Model]

Neymotin SA, Dura-Bernal S, Lakatos P, Sanger TD, Lytton WW. (2016). Multitarget Multiscale Simulation for Pharmacological Treatment of Dystonia in Motor Cortex. Frontiers in pharmacology. 7 [PubMed]

• Multitarget pharmacology for Dystonia in M1 (Neymotin et al 2016) [Model]

Reimann MW, Horlemann AL, Ramaswamy S, Muller EB, Markram H. (2017). Morphological Diversity Strongly Constrains Synaptic Connectivity and Plasticity. Cerebral cortex (New York, N.Y. : 1991). 27 [PubMed]

• The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Reimann MW, King JG, Muller EB, Ramaswamy S, Markram H. (2015). An algorithm to predict the connectome of neural microcircuits. Frontiers in computational neuroscience. 9 [PubMed]

• The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

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• A computational model of single-neuron perturbations (Sadeh and Clopath 2020) [Model]

Sadeh S, Clopath C, Rotter S. (2015). Emergence of Functional Specificity in Balanced Networks with Synaptic Plasticity. PLoS computational biology. 11 [PubMed]

• Functional balanced networks with synaptic plasticity (Sadeh et al, 2015) [Model]

Sadeh S, Clopath C, Rotter S. (2015). Processing of Feature Selectivity in Cortical Networks with Specific Connectivity. PloS one. 10 [PubMed]

• A spiking NN for amplification of feature-selectivity with specific connectivity (Sadeh et al 2015) [Model]

Sadeh S, Rotter S. (2015). Orientation selectivity in inhibition-dominated networks of spiking neurons: effect of single neuron properties and network dynamics. PLoS computational biology. 11 [PubMed]

• Orientation selectivity in inhibition-dominated recurrent networks (Sadeh and Rotter, 2015) [Model]

Sun Q, Srinivas KV, Sotayo A, Siegelbaum SA. (2014). Dendritic Na+ spikes enable cortical input to drive action potential output from hippocampal CA2 pyramidal neurons. eLife. 3 [PubMed]

Tomm C, Avermann M, Petersen C, Gerstner W, Vogels TP. (2014). Connection-type-specific biases make uniform random network models consistent with cortical recordings. Journal of neurophysiology. 112 [PubMed]

Yang GR, Murray JD, Wang XJ. (2016). A dendritic disinhibitory circuit mechanism for pathway-specific gating. Nature communications. 7 [PubMed]

• A dendritic disinhibitory circuit mechanism for pathway-specific gating (Yang et al. 2016) [Model]