Acebes A, Ferrús A. (2000). Cellular and molecular features of axon collaterals and dendrites. Trends in neurosciences. 23 [PubMed]
Aeschlimann M. (2000). Biophysical models of axonal pathfinding PhD Thesis.
Alvarez J, Giuditta A, Koenig E. (2000). Protein synthesis in axons and terminals: significance for maintenance, plasticity and regulation of phenotype. With a critique of slow transport theory. Progress in neurobiology. 62 [PubMed]
Ascoli GA. (2002). Neuroanatomical algorithms for dendritic modelling. Network (Bristol, England). 13 [PubMed]
Ascoli GA. (2002). Computational neuroanatomy: Principles and methods.
Beeman D, Bower J. (1994). The Book of GENESIS: exploring realistic neural models with the GEneral NEural Simulation System.
Ben-Jacob E, Segev R. (2001). Chemical waves and internal energy during cooperative self-wiring of neural nets Neurocomputing. 38
Bhalla US, Iyengar R. (1999). Emergent properties of networks of biological signaling pathways. Science (New York, N.Y.). 283 [PubMed]
Bray D. (1973). Branching patterns of individual sympathetic neurons in culture. The Journal of cell biology. 56 [PubMed]
Burke RE, Marks WB, Ulfhake B. (1992). A parsimonious description of motoneuron dendritic morphology using computer simulation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 12 [PubMed]
Chklovskii D, Ben-Jacob E, Shefi O, Ayali A, Harel A. (2004). Biophysical constraints on neuronal branching Neurocomputing. 58
Fine A, Hentschel H. (2003). Early dendritic and axonal morphogenesis Modeling Neural Development.
Fine A, Hentschel H, Samuels D. (1998). Instabilities during the dendritic and axonal development of neuronal form Physica A. 254
Goodhill G, Urbach J. (2003). Axon guidance and gradient detection by growth cones Modeling Neural Development.
Graham B, Mclean D. (2004). Mathematical formulation and analysis of a continuum model for tubulin-driven neurite elongation Proc Roy Soc Lond. 460
Graham B, Van Ooyen A. (2001). Compartmental models of growing neurites Neurocomputing. 38
Graham B, Van Pelt J, Uylings H. (2003). Formation of dendriticbranching patterns Modeling Neural Development (chapter 4).
Graham B, Van_ooyen A, Ramakers G. (2001). Competition for tubulin between growing neurites during development Neurocomputing. 38
Graham B, van Ooyen A, Mclean D. (2004). Continuum model for tubulin-driven neurite elongation Neurocomputing. 58
Graham BP. (2001). Pattern recognition in a compartmental model of a CA1 pyramidal neuron. Network (Bristol, England). 12 [PubMed]
Graham BP, Lauchlan K, Mclean DR. (2006). Dynamics of outgrowth in a continuum model of neurite elongation. Journal of computational neuroscience. 20 [PubMed]
Graham BP, van Ooyen A. (2004). Transport limited effects in a model of dendritic branching. Journal of theoretical biology. 230 [PubMed]
Hely TA, Graham B, Ooyen AV. (2001). A computational model of dendrite elongation and branching based on MAP2 phosphorylation. Journal of theoretical biology. 210 [PubMed]
Hentschel HG, Fine A. (1994). Instabilities in Cellular Dendritic Morphogenesis. Physical review letters. 73 [PubMed]
Hentschel HG, Fine A. (1996). Diffusion-regulated control of cellular dendritic morphogenesis. Proceedings. Biological sciences. 263 [PubMed]
Hentschel HG, van Ooyen A. (1999). Models of axon guidance and bundling during development. Proceedings. Biological sciences. 266 [PubMed]
Hillman DE. (1979). Neuronal shape parameters and substructures as a basis of neuronal form. The Neurosciences (4th Study Program).
Hines M. (1984). Efficient computation of branched nerve equations. International journal of bio-medical computing. 15 [PubMed]
Hines ML, Carnevale NT. (1997). The NEURON simulation environment. Neural computation. 9 [PubMed]
Janulevicius A, van Pelt J, van Ooyen A. (2006). Compartment volume influences microtubule dynamic instability: a model study. Biophysical journal. 90 [PubMed]
Kiddie G, McLean D, Van Ooyen A, Graham B. (2005). Biologically plausible models of neurite outgrowth. Progress in brain research. 147 [PubMed]
Krottje JK, van Ooyen A. (2007). A mathematical framework for modeling axon guidance. Bulletin of mathematical biology. 69 [PubMed]
Li GH, Qin CD, Li MH. (1994). On the mechanisms of growth cone locomotion: modeling and computer simulation. Journal of theoretical biology. 169 [PubMed]
Mainen ZF, Sejnowski TJ. (1996). Influence of dendritic structure on firing pattern in model neocortical neurons. Nature. 382 [PubMed]
Mascagni MV, Sherman AS. (1998). Numerical methods for neuronal modelling. Methods in Neuronal Modeling From Synapses to Networks, 2nd Edition.
Maskery SM, Buettner HM, Shinbrot T. (2004). Growth cone pathfinding: a competition between deterministic and stochastic events. BMC neuroscience. 5 [PubMed]
Mel BW. (1993). Synaptic integration in an excitable dendritic tree. Journal of neurophysiology. 70 [PubMed]
Miller KE, Samuels DC. (1997). The axon as a metabolic compartment: protein degradation, transport, and maximum length of an axon. Journal of theoretical biology. 186 [PubMed]
Mogilner A, Edelstein-Keshet L. (2002). Regulation of actin dynamics in rapidly moving cells: a quantitative analysis. Biophysical journal. 83 [PubMed]
Odde DJ. (1997). Estimation of the diffusion-limited rate of microtubule assembly. Biophysical journal. 73 [PubMed]
Odde DJ, Cassimeris L, Buettner HM. (1995). Kinetics of microtubule catastrophe assessed by probabilistic analysis. Biophysical journal. 69 [PubMed]
Pedigo S, Williams RC. (2002). Concentration dependence of variability in growth rates of microtubules. Biophysical journal. 83 [PubMed]
Qin CD, Wang LW, Gh LI. (1995). Computer model of growth cone behavior and neuronal morphogenesis J Theor Biol. 174
Samsonovich AV, Ascoli GA. (2003). Statistical morphological analysis of hippocampal principal neurons indicates cell-specific repulsion of dendrites from their own cell. Journal of neuroscience research. 71 [PubMed]
Samsonovich AV, Ascoli GA. (2005). Statistical determinants of dendritic morphology in hippocampal pyramidal neurons: A hidden Markov model. Hippocampus. 15 [PubMed]
Samuels DC, Hentschel HG, Fine A. (1996). The origin of neuronal polarization: a model of axon formation. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 351 [PubMed]
Segev I, Burke RE, Fleshman JW. (1998). Compartmental models of complex neurons Methods in Neuronal Modeling.
Segev R, Ben-Jacob E. (2000). Generic modeling of chemotactic based self-wiring of neural networks. Neural networks : the official journal of the International Neural Network Society. 13 [PubMed]
Shefi O, Golebowicz S, Ben-Jacob E, Ayali A. (2005). A two-phase growth strategy in cultured neuronal networks as reflected by the distribution of neurite branching angles. Journal of neurobiology. 62 [PubMed]
Smith DA, Simmons RM. (2001). Models of motor-assisted transport of intracellular particles. Biophysical journal. 80 [PubMed]
Tamori Y. (1993). Theory of dendritic morphology. Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics. 48 [PubMed]
Tettoni L, Aeschlimann M. (2001). Biophysical model of axonal path finding Neurocomputing. 38
Van Pelt J, Uylings HB. (1999). Natural variability in the geometry of dendritic branching patterns. Modeling in the Neurosciences, From Ionic Channels to Neural Networks.
Van Veen MP, Van Pelt J. (1994). Neuritic growth rate described by modeling microtubule dynamics. Bulletin of mathematical biology. 56 [PubMed]
Willshaw D, Price D. (2003). Models for topographic map formation Modeling Neural Development.
van Ooyen A. (2003). Modeling Neural Development.
van Ooyen A, Duijnhouwer J, Remme MW, van Pelt J. (2002). The effect of dendritic topology on firing patterns in model neurons. Network (Bristol, England). 13 [PubMed]
van Ooyen A, van Pelt J. (2002). Competition in neuronal morphogenesis and the development of nerve connections Computational Neuroanatomy: Principles and Methods.
van Pelt J, van_Veen M. (1992). A model for outgrowth of branching neurites J Theor Biol. 159
Diehl S, Henningsson E, Heyden A. (2016). Efficient simulations of tubulin-driven axonal growth. Journal of computational neuroscience. 41 [PubMed]
Sterratt DC, Graham B, Gillies A, Willshaw D. (2011). Principles of Computational Modelling in Neuroscience, Cambridge University Press.