Hines ML, Carnevale NT. (1997). The NEURON simulation environment. Neural computation. 9 [PubMed]

See more from authors: Hines ML · Carnevale NT

References and models cited by this paper
References and models that cite this paper

Aberra AS, Peterchev AV, Grill WM. (2018). Biophysically realistic neuron models for simulation of cortical stimulation. Journal of neural engineering. 15 [PubMed]

Acker CD, Hoyos E, Loew LM. (2016). EPSPs Measured in Proximal Dendritic Spines of Cortical Pyramidal Neurons. eNeuro. 3 [PubMed]

Aguiar P, Sousa M, Lima D. (2010). NMDA channels together with L-type calcium currents and calcium-activated nonspecific cationic currents are sufficient to generate windup in WDR neurons. Journal of neurophysiology. 104 [PubMed]

Aguiar P, Willshaw D. (2004). Hippocampal mossy fibre boutons as dynamical synapses Neurocomputing. 58

Ait Ouares K, Filipis L, Tzilivaki A, Poirazi P, Canepari M. (2019). Two Distinct Sets of Ca2+ and K+ Channels Are Activated at Different Membrane Potentials by the Climbing Fiber Synaptic Potential in Purkinje Neuron Dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]

Akemann W, Knöpfel T. (2006). Interaction of Kv3 potassium channels and resurgent sodium current influences the rate of spontaneous firing of Purkinje neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Akemann W, Lundby A, Mutoh H, Knöpfel T. (2009). Effect of voltage sensitive fluorescent proteins on neuronal excitability. Biophysical journal. 96 [PubMed]

Alle H, Roth A, Geiger JR. (2009). Energy-efficient action potentials in hippocampal mossy fibers. Science (New York, N.Y.). 325 [PubMed]

Allen JM, Elbasiouny SM. (2018). The effects of model composition design choices on high-fidelity simulations of motoneuron recruitment and firing behaviors. Journal of neural engineering. 15 [PubMed]

Allken V, Chepkoech JL, Einevoll GT, Halnes G. (2014). The subcellular distribution of T-type Ca2+ channels in interneurons of the lateral geniculate nucleus. PloS one. 9 [PubMed]

Amir R, Devor M. (2003). Electrical excitability of the soma of sensory neurons is required for spike invasion of the soma, but not for through-conduction. Biophysical journal. 84 [PubMed]

Amir R, Kocsis JD, Devor M. (2005). Multiple interacting sites of ectopic spike electrogenesis in primary sensory neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Amir R, Liu CN, Kocsis JD, Devor M. (2002). Oscillatory mechanism in primary sensory neurones. Brain : a journal of neurology. 125 [PubMed]

Anderson JC, Binzegger T, Kahana O, Martin KA, Segev I. (1999). Dendritic asymmetry cannot account for directional responses of neurons in visual cortex. Nature neuroscience. 2 [PubMed]

Anderson WS, Kudela P, Cho J, Bergey GK, Franaszczuk PJ. (2007). Studies of stimulus parameters for seizure disruption using neural network simulations. Biological cybernetics. 97 [PubMed]

Angelo K, London M, Christensen SR, Häusser M. (2007). Local and global effects of I(h) distribution in dendrites of mammalian neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]

Anwar H et al. (2014). Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Frontiers in cellular neuroscience. 8 [PubMed]

Appukuttan S, Brain KL, Manchanda R. (2015). A computational model of urinary bladder smooth muscle syncytium : validation and investigation of electrical properties. Journal of computational neuroscience. 38 [PubMed]

Appukuttan S, Brain KL, Manchanda R. (2017). Modeling extracellular fields for a three-dimensional network of cells using NEURON. Journal of neuroscience methods. 290 [PubMed]

Aradi I, Santhakumar V, Chen K, Soltesz I. (2002). Postsynaptic effects of GABAergic synaptic diversity: regulation of neuronal excitability by changes in IPSC variance. Neuropharmacology. 43 [PubMed]

Aradi I, Santhakumar V, Soltesz I. (2004). Impact of heterogeneous perisomatic IPSC populations on pyramidal cell firing rates. Journal of neurophysiology. 91 [PubMed]

Aradi I, Soltesz I. (2002). Modulation of network behaviour by changes in variance in interneuronal properties. The Journal of physiology. 538 [PubMed]

Archie KA, Mel BW. (2000). A model for intradendritic computation of binocular disparity. Nature neuroscience. 3 [PubMed]

Ariav G, Polsky A, Schiller J. (2003). Submillisecond precision of the input-output transformation function mediated by fast sodium dendritic spikes in basal dendrites of CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Arkhipov A et al. (2018). Visual physiology of the layer 4 cortical circuit in silico. PLoS computational biology. 14 [PubMed]

Avella Gonzalez OJ, Mansvelder HD, van Pelt J, van Ooyen A. (2015). H-Channels Affect Frequency, Power and Amplitude Fluctuations of Neuronal Network Oscillations. Frontiers in computational neuroscience. 9 [PubMed]

Avella Gonzalez OJ, van Aerde KI, Mansvelder HD, van Pelt J, van Ooyen A. (2014). Inter-network interactions: impact of connections between oscillatory neuronal networks on oscillation frequency and pattern. PloS one. 9 [PubMed]

Avella Gonzalez OJ et al. (2012). External drive to inhibitory cells induces alternating episodes of high- and low-amplitude oscillations. PLoS computational biology. 8 [PubMed]

Badoual M et al. (2006). Biophysical and phenomenological models of multiple spike interactions in spike-timing dependent plasticity. International journal of neural systems. 16 [PubMed]

Bahmer A, Langner G. (2010). Parameters for a model of an oscillating neuronal network in the cochlear nucleus defined by genetic algorithms. Biological cybernetics. 102 [PubMed]

Banitt Y, Martin KA, Segev I. (2007). A biologically realistic model of contrast invariant orientation tuning by thalamocortical synaptic depression. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]

Bar-Yehuda D, Korngreen A. (2008). Space-clamp problems when voltage clamping neurons expressing voltage-gated conductances. Journal of neurophysiology. 99 [PubMed]

Barela AJ et al. (2006). An epilepsy mutation in the sodium channel SCN1A that decreases channel excitability. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Barkai O, Butterman R, Katz B, Lev S, Binshtok AM. (2020). The Input-Output Relation of Primary Nociceptive Neurons is Determined by the Morphology of the Peripheral Nociceptive Terminals. The Journal of neuroscience : the official journal of the Society for Neuroscience. 40 [PubMed]

Bartos M, Vida I, Frotscher M, Geiger JR, Jonas P. (2001). Rapid signaling at inhibitory synapses in a dentate gyrus interneuron network. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Bartos M et al. (2002). Fast synaptic inhibition promotes synchronized gamma oscillations in hippocampal interneuron networks. Proceedings of the National Academy of Sciences of the United States of America. 99 [PubMed]

Bednar JA, Kelkar A, Miikkulainen R. (2004). Scaling self-organizing maps to model large cortical networks. Neuroinformatics. 2 [PubMed]

Behabadi BF, Mel BW. (2007). J4 at sweet 16: a new wrinkle? Neural computation. 19 [PubMed]

Bellinger SC, Miyazawa G, Steinmetz PN. (2008). Submyelin potassium accumulation may functionally block subsets of local axons during deep brain stimulation: a modeling study. Journal of neural engineering. 5 [PubMed]

Berends M, Maex R, De Schutter E. (2005). The effect of NMDA receptors on gain modulation. Neural computation. 17 [PubMed]

Bernard C, Jirsa VK, Woodman MM, Melozzi F. (2017). The Virtual Mouse Brain: A Computational Neuroinformatics Platform to Study Whole Mouse Brain Dynamics eNeuro.

Bessaïh T, Leresche N, Lambert RC. (2008). T current potentiation increases the occurrence and temporal fidelity of synaptically evoked burst firing in sensory thalamic neurons. Proceedings of the National Academy of Sciences of the United States of America. 105 [PubMed]

Bhadra N, Lahowetz EA, Foldes ST, Kilgore KL. (2007). Simulation of high-frequency sinusoidal electrical block of mammalian myelinated axons. Journal of computational neuroscience. 22 [PubMed]

Bianchi D et al. (2014). Effects of increasing CREB-dependent transcription on the storage and recall processes in a hippocampal CA1 microcircuit. Hippocampus. 24 [PubMed]

Bichler EK, Cavarretta F, Jaeger D. (2021). Changes in Excitability Properties of Ventromedial Motor Thalamic Neurons in 6-OHDA Lesioned Mice. eNeuro. 8 [PubMed]

Bird AD, Cuntz H. (2016). Optimal Current Transfer in Dendrites. PLoS computational biology. 12 [PubMed]

Birdno MJ, Cooper SE, Rezai AR, Grill WM. (2007). Pulse-to-pulse changes in the frequency of deep brain stimulation affect tremor and modeled neuronal activity. Journal of neurophysiology. 98 [PubMed]

Birdno MJ et al. (2012). Stimulus features underlying reduced tremor suppression with temporally patterned deep brain stimulation. Journal of neurophysiology. 107 [PubMed]

Bloss EB et al. (2016). Structured Dendritic Inhibition Supports Branch-Selective Integration in CA1 Pyramidal Cells. Neuron. 89 [PubMed]

Bloss EB et al. (2018). Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites. Nature neuroscience. 21 [PubMed]

Bock T, Negrean A, Siegelbaum SA. (2022). Somatic depolarization enhances hippocampal CA1 dendritic spike propagation and distal input-driven synaptic plasticity The Journal of neuroscience : the official journal of the Society for Neuroscience. 42 [PubMed]

Booth V, Poe GR. (2006). Input source and strength influences overall firing phase of model hippocampal CA1 pyramidal cells during theta: relevance to REM sleep reactivation and memory consolidation. Hippocampus. 16 [PubMed]

Borg-Graham LJ. (2000). Additional efficient computation of branched nerve equations: adaptive time step and ideal voltage clamp. Journal of computational neuroscience. 8 [PubMed]

Bossetti CA, Birdno MJ, Grill WM. (2008). Analysis of the quasi-static approximation for calculating potentials generated by neural stimulation. Journal of neural engineering. 5 [PubMed]

Branco T, Häusser M. (2011). Synaptic integration gradients in single cortical pyramidal cell dendrites. Neuron. 69 [PubMed]

Bras H, Lahjouji F, Korogod SM, Kulagina IB, Barbe A. (2003). Heterogeneous synaptic covering and differential charge transfer sensitivity among the dendrites of a reconstructed abducens motor neurone: correlations between electron microscopic and computer simulation data. Journal of neurocytology. 32 [PubMed]

Brecht M, Roth A, Sakmann B. (2003). Dynamic receptive fields of reconstructed pyramidal cells in layers 3 and 2 of rat somatosensory barrel cortex. The Journal of physiology. 553 [PubMed]

Brecht M, Sakmann B. (2002). Dynamic representation of whisker deflection by synaptic potentials in spiny stellate and pyramidal cells in the barrels and septa of layer 4 rat somatosensory cortex. The Journal of physiology. 543 [PubMed]

Breen BJ, Gerken WC, Butera RJ. (2003). Hybrid integrate-and-fire model of a bursting neuron. Neural computation. 15 [PubMed]

Brette R, Gerstner W. (2005). Adaptive exponential integrate-and-fire model as an effective description of neuronal activity. Journal of neurophysiology. 94 [PubMed]

Brette R et al. (2008). High-resolution intracellular recordings using a real-time computational model of the electrode. Neuron. 59 [PubMed]

Brette R et al. (2007). Simulation of networks of spiking neurons: a review of tools and strategies. Journal of computational neuroscience. 23 [PubMed]

Broser PJ et al. (2004). Nonlinear anisotropic diffusion filtering of three-dimensional image data from two-photon microscopy. Journal of biomedical optics. 9 [PubMed]

Brown SA, Moraru II, Schaff JC, Loew LM. (2011). Virtual NEURON: a strategy for merged biochemical and electrophysiological modeling. Journal of computational neuroscience. 31 [PubMed]

Budd JM. (2005). Theta oscillations by synaptic excitation in a neocortical circuit model. Proceedings. Biological sciences. 272 [PubMed]

Bush PC, Prince DA, Miller KD. (1999). Increased pyramidal excitability and NMDA conductance can explain posttraumatic epileptogenesis without disinhibition: a model. Journal of neurophysiology. 82 [PubMed]

Butson CR, Maks CB, McIntyre CC. (2006). Sources and effects of electrode impedance during deep brain stimulation. Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. 117 [PubMed]

Butson CR, McIntyre CC. (2006). Role of electrode design on the volume of tissue activated during deep brain stimulation. Journal of neural engineering. 3 [PubMed]

Bédard C, Béhuret S, Deleuze C, Bal T, Destexhe A. (2012). Oversampling method to extract excitatory and inhibitory conductances from single-trial membrane potential recordings. Journal of neuroscience methods. 210 [PubMed]

Bédard C, Destexhe A. (2008). A modified cable formalism for modeling neuronal membranes at high frequencies. Biophysical journal. 94 [PubMed]

Bédard C, Kröger H, Destexhe A. (2004). Modeling extracellular field potentials and the frequency-filtering properties of extracellular space. Biophysical journal. 86 [PubMed]

Béhuret S, Deleuze C, Gomez L, Frégnac Y, Bal T. (2013). Cortically-controlled population stochastic facilitation as a plausible substrate for guiding sensory transfer across the thalamic gateway PLoS computational biology. 9 [PubMed]

Calin-Jageman RJ, Katz PS. (2006). A distributed computing tool for generating neural simulation databases. Neural computation. 18 [PubMed]

Calin-Jageman RJ, Tunstall MJ, Mensh BD, Katz PS, Frost WN. (2007). Parameter space analysis suggests multi-site plasticity contributes to motor pattern initiation in Tritonia. Journal of neurophysiology. 98 [PubMed]

Camuñas-Mesa LA, Quiroga RQ. (2013). A detailed and fast model of extracellular recordings. Neural computation. 25 [PubMed]

Cannon RC, O'Donnell C, Nolan MF. (2010). Stochastic ion channel gating in dendritic neurons: morphology dependence and probabilistic synaptic activation of dendritic spikes. PLoS computational biology. 6 [PubMed]

Capllonch-Juan M, Sepulveda F. (2020). Modelling the effects of ephaptic coupling on selectivity and response patterns during artificial stimulation of peripheral nerves. PLoS computational biology. 16 [PubMed]

Capurro A, Diambra L, Malta CP. (2003). Model for the heart beat-to-beat timeseries during meditation Physica A. 327

Carlin KP, Jones KE, Jiang Z, Jordan LM, Brownstone RM. (2000). Dendritic L-type calcium currents in mouse spinal motoneurons: implications for bistability. The European journal of neuroscience. 12 [PubMed]

Carlin KP, Jones KE, Jordan LM, Brownstone RM, Rempel J. (2000). Simulation techniques for localising and identifying the kinetics of calcium channels in dendritic neurones Neurocomputing. 32

Carrillo RR, Ros E, Barbour B, Boucheny C, Coenen O. (2007). Event-driven simulation of neural population synchronization facilitated by electrical coupling. Bio Systems. 87 [PubMed]

Carrillo RR, Ros E, Tolu S, Nieus T, D'Angelo E. (2008). Event-driven simulation of cerebellar granule cells. Bio Systems. 94 [PubMed]

Carvalho TP, Buonomano DV. (2009). Differential effects of excitatory and inhibitory plasticity on synaptically driven neuronal input-output functions. Neuron. 61 [PubMed]

Casaleggio A, Hines ML, Migliore M. (2014). Computational model of erratic arrhythmias in a cardiac cell network: the role of gap junctions. PloS one. 9 [PubMed]

Cassarà AM, Hagberg GE, Bianciardi M, Migliore M, Maraviglia B. (2008). Realistic simulations of neuronal activity: a contribution to the debate on direct detection of neuronal currents by MRI. NeuroImage. 39 [PubMed]

Cassarà AM, Maraviglia B. (2008). Microscopic investigation of the resonant mechanism for the implementation of nc-MRI at ultra-low field MRI. NeuroImage. 41 [PubMed]

Castelfranco AM, Hartline DK. (2004). Corrections for space-clamp errors in measured parameters of voltage-dependent conductances in a cylindrical neurite. Biological cybernetics. 90 [PubMed]

Cataldi M et al. (2007). Zn(2+) slows down Ca(V)3.3 gating kinetics: implications for thalamocortical activity. Journal of neurophysiology. 98 [PubMed]

Cathala L, Brickley S, Cull-Candy S, Farrant M. (2003). Maturation of EPSCs and intrinsic membrane properties enhances precision at a cerebellar synapse. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Cavarretta F, Carnevale NT, Tegolo D, Migliore M. (2014). Effects of low frequency electric fields on synaptic integration in hippocampal CA1 pyramidal neurons: implications for power line emissions. Frontiers in cellular neuroscience. 8 [PubMed]

Cavarretta F, Marasco A, Hines ML, Shepherd GM, Migliore M. (2016). Glomerular and Mitral-Granule Cell Microcircuits Coordinate Temporal and Spatial Information Processing in the Olfactory Bulb. Frontiers in computational neuroscience. 10 [PubMed]

Chan CS, Shigemoto R, Mercer JN, Surmeier DJ. (2004). HCN2 and HCN1 channels govern the regularity of autonomous pacemaking and synaptic resetting in globus pallidus neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

Chemin J, Monteil A, Bourinet E, Nargeot J, Lory P. (2001). Alternatively spliced alpha(1G) (Ca(V)3.1) intracellular loops promote specific T-type Ca(2+) channel gating properties. Biophysical journal. 80 [PubMed]

Chemin J et al. (2002). Specific contribution of human T-type calcium channel isotypes (alpha(1G), alpha(1H) and alpha(1I)) to neuronal excitability. The Journal of physiology. 540 [PubMed]

Chemin J, Monteil A, Perez-Reyes E, Nargeot J, Lory P. (2001). Direct inhibition of T-type calcium channels by the endogenous cannabinoid anandamide. The EMBO journal. 20 [PubMed]

Chen E, Stiefel KM, Sejnowski TJ, Bullock TH. (2008). Model of traveling waves in a coral nerve network. Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology. 194 [PubMed]

Chen N, Li B, Murphy TH, Raymond LA. (2004). Site within N-Methyl-D-aspartate receptor pore modulates channel gating. Molecular pharmacology. 65 [PubMed]

Chen N, Ren J, Raymond LA, Murphy TH. (2001). Changes in agonist concentration dependence that are a function of duration of exposure suggest N-methyl-D-aspartate receptor nonsaturation during synaptic stimulation. Molecular pharmacology. 59 [PubMed]

Chen WR, Shen GY, Shepherd GM, Hines ML, Midtgaard J. (2002). Multiple modes of action potential initiation and propagation in mitral cell primary dendrite. Journal of neurophysiology. 88 [PubMed]

Chen X, Shu S, Kennedy DP, Willcox SC, Bayliss DA. (2009). Subunit-specific effects of isoflurane on neuronal Ih in HCN1 knockout mice. Journal of neurophysiology. 101 [PubMed]

Chitwood RA, Hubbard A, Jaffe DB. (1999). Passive electrotonic properties of rat hippocampal CA3 interneurones. The Journal of physiology. 515 ( Pt 3) [PubMed]

Chiu CQ et al. (2013). Compartmentalization of GABAergic inhibition by dendritic spines. Science (New York, N.Y.). 340 [PubMed]

Chono K, Takagi H, Koyama S, Suzuki H, Ito E. (2003). A cell model study of calcium influx mechanism regulated by calcium-dependent potassium channels in Purkinje cell dendrites. Journal of neuroscience methods. 129 [PubMed]

Christensen TA, D'Alessandro G, Lega J, Hildebrand JG. (2001). Morphometric modeling of olfactory circuits in the insect antennal lobe: I. Simulations of spiking local interneurons. Bio Systems. 61 [PubMed]

Cleland TA, Sethupathy P. (2006). Non-topographical contrast enhancement in the olfactory bulb. BMC neuroscience. 7 [PubMed]

Coggan JS, Prescott SA, Bartol TM, Sejnowski TJ. (2010). Imbalance of ionic conductances contributes to diverse symptoms of demyelination. Proceedings of the National Academy of Sciences of the United States of America. 107 [PubMed]

Cohen A, Shappir J, Yitzchaik S, Spira ME. (2006). Experimental and theoretical analysis of neuron-transistor hybrid electrical coupling: the relationships between the electro-anatomy of cultured Aplysia neurons and the recorded field potentials. Biosensors & bioelectronics. 22 [PubMed]

Cohen MX. (2014). Fluctuations in oscillation frequency control spike timing and coordinate neural networks. The Journal of neuroscience : the official journal of the Society for Neuroscience. 34 [PubMed]

Conde-Sousa E, Aguiar P. (2013). A working memory model for serial order that stores information in the intrinsic excitability properties of neurons. Journal of computational neuroscience. 35 [PubMed]

Crane GJ, Hines ML, Neild TO. (2001). Simulating the spread of membrane potential changes in arteriolar networks. Microcirculation (New York, N.Y. : 1994). 8 [PubMed]

Crone JC et al. (2019). Enabling Large-Scale Simulations With the GENESIS Neuronal Simulator Frontiers in Neuroinformatics. 13

Crotty P, Levy WB. (2006). Intersymbol interference in axonal transmission Neurocomputing. 69

Crotty P, Sangrey T, Levy WB. (2006). Metabolic energy cost of action potential velocity. Journal of neurophysiology. 96 [PubMed]

Culmone V, Migliore M. (2012). Progressive effect of beta amyloid peptides accumulation on CA1 pyramidal neurons: a model study suggesting possible treatments. Frontiers in computational neuroscience. 6 [PubMed]

Cuntz H, Haag J, Borst A. (2003). Neural image processing by dendritic networks. Proceedings of the National Academy of Sciences of the United States of America. 100 [PubMed]

Cuntz H, Haag J, Forstner F, Segev I, Borst A. (2007). Robust coding of flow-field parameters by axo-axonal gap junctions between fly visual interneurons. Proceedings of the National Academy of Sciences of the United States of America. 104 [PubMed]

Cutsuridis V, Cobb S, Graham BP. (2010). Encoding and retrieval in a model of the hippocampal CA1 microcircuit. Hippocampus. 20 [PubMed]

Cutsuridis V, Poirazi P. (2015). A computational study on how theta modulated inhibition can account for the long temporal windows in the entorhinal-hippocampal loop. Neurobiology of learning and memory. 120 [PubMed]

D'Angelo E et al. (2001). Theta-frequency bursting and resonance in cerebellar granule cells: experimental evidence and modeling of a slow k+-dependent mechanism. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Dan O, Hopp E, Borst A, Segev I. (2018). Non-uniform weighting of local motion inputs underlies dendritic computation in the fly visual system. Scientific reports. 8 [PubMed]

Davison A. (2004). Biologically-detailed network modelling (Chapter 10) Computation Neuroscience: A Comprehensive Approach.

Davison AP, Feng J, Brown D. (2003). Dendrodendritic inhibition and simulated odor responses in a detailed olfactory bulb network model. Journal of neurophysiology. 90 [PubMed]

Debay D, Wolfart J, Le Franc Y, Le Masson G, Bal T. (2004). Exploring spike transfer through the thalamus using hybrid artificial-biological neuronal networks. Journal of physiology, Paris. 98 [PubMed]

Delgado JY, Gómez-González JF, Desai NS. (2010). Pyramidal neuron conductance state gates spike-timing-dependent plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

Desjardins AE, Li YX, Reinker S, Miura RM, Neuman RS. (2003). The influences of Ih on temporal summation in hippocampal CA1 pyramidal neurons: a modeling study. Journal of computational neuroscience. 15 [PubMed]

Destexhe A. (1998). Spike-and-wave oscillations based on the properties of GABAB receptors. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Destexhe A. (1999). Can GABAA conductances explain the fast oscillation frequency of absence seizures in rodents? The European journal of neuroscience. 11 [PubMed]

Destexhe A. (2000). Modelling corticothalamic feedback and the gating of the thalamus by the cerebral cortex. Journal of physiology, Paris. 94 [PubMed]

Destexhe A. (2009). Self-sustained asynchronous irregular states and Up-Down states in thalamic, cortical and thalamocortical networks of nonlinear integrate-and-fire neurons. Journal of computational neuroscience. 27 [PubMed]

Destexhe A, Contreras D, Steriade M. (1998). Mechanisms underlying the synchronizing action of corticothalamic feedback through inhibition of thalamic relay cells. Journal of neurophysiology. 79 [PubMed]

Destexhe A, Contreras D, Steriade M. (1999). Cortically-induced coherence of a thalamic-generated oscillation. Neuroscience. 92 [PubMed]

Destexhe A, Huguenard JR. (2000). Nonlinear thermodynamic models of voltage-dependent currents. Journal of computational neuroscience. 9 [PubMed]

Destexhe A, Neubig M. (1999). Low threshold calcium T-current IV curve geometry is alterable through the distribution of T-channels in thalamic relay neurons Neurocomputing. 26-27

Destexhe A, Neubig M. (2000). The dendritic organization of thalamocortical relay neurons and the dual functions of their inhibitory synaptic input Thalamus Regul Syst. 1

Destexhe A, Neubig M, Ulrich D, Huguenard J. (1998). Dendritic low-threshold calcium currents in thalamic relay cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Destexhe A, Rudolph M. (2004). Extracting information from the power spectrum of synaptic noise. Journal of computational neuroscience. 17 [PubMed]

Destexhe A, Rudolph M. (2005). Extracting information from the power spectrum of voltage noise Neurocomputing. 65

Destexhe A, Rudolph M, Bal T, Badoual M, Piwkowska Z. (2004). A novel method for characterizing synaptic noise in cortical neurons Neurocomputing. 58

Destexhe A, Rudolph M, Fellous JM, Sejnowski TJ. (2001). Fluctuating synaptic conductances recreate in vivo-like activity in neocortical neurons. Neuroscience. 107 [PubMed]

Destexhe A, Rudolph M, Paré D. (2003). The high-conductance state of neocortical neurons in vivo. Nature reviews. Neuroscience. 4 [PubMed]

Destexhe A, Sejnowski TJ. (2002). The initiation of bursts in thalamic neurons and the cortical control of thalamic sensitivity. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 357 [PubMed]

Destexhe A, Sejnowski TJ. (2003). Interactions between membrane conductances underlying thalamocortical slow-wave oscillations. Physiological reviews. 83 [PubMed]

Devaux J, Gow A. (2008). Tight junctions potentiate the insulative properties of small CNS myelinated axons. The Journal of cell biology. 183 [PubMed]

Devor A, Yarom Y. (2002). Electrotonic coupling in the inferior olivary nucleus revealed by simultaneous double patch recordings. Journal of neurophysiology. 87 [PubMed]

DiGregorio DA, Nusser Z, Silver RA. (2002). Spillover of glutamate onto synaptic AMPA receptors enhances fast transmission at a cerebellar synapse. Neuron. 35 [PubMed]

Diamond JS, Polsky A. (2011). Imperfect Space Clamp Permits Electrotonic Interactions between Inhibitory and Excitatory Synaptic Conductances, Distorting Voltage Clamp Recordings. PLoS ONE. 6(4)

Diba K, Koch C, Segev I. (2006). Spike propagation in dendrites with stochastic ion channels. Journal of computational neuroscience. 20 [PubMed]

Dietz M, Wang L, Greenberg D, McAlpine D. (2016). Sensitivity to Interaural Time Differences Conveyed in the Stimulus Envelope: Estimating Inputs of Binaural Neurons Through the Temporal Analysis of Spike Trains. Journal of the Association for Research in Otolaryngology : JARO. 17 [PubMed]

Diwakar S, Lombardo P, Solinas S, Naldi G, D'Angelo E. (2011). Local field potential modeling predicts dense activation in cerebellar granule cells clusters under LTP and LTD control. PloS one. 6 [PubMed]

Doiron B, Longtin A, Berman N, Maler L. (2001). Subtractive and divisive inhibition: effect of voltage-dependent inhibitory conductances and noise. Neural computation. 13 [PubMed]

Doiron B, Longtin A, Turner RW, Maler L. (2001). Model of gamma frequency burst discharge generated by conditional backpropagation. Journal of neurophysiology. 86 [PubMed]

Doiron B, Noonan L, Lemon N, Turner RW. (2003). Persistent Na+ current modifies burst discharge by regulating conditional backpropagation of dendritic spikes. Journal of neurophysiology. 89 [PubMed]

Doischer D et al. (2008). Postnatal differentiation of basket cells from slow to fast signaling devices. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Dougalis AG, Matthews GAC, Liss B, Ungless MA. (2017). Ionic currents influencing spontaneous firing and pacemaker frequency in dopamine neurons of the ventrolateral periaqueductal gray and dorsal raphe nucleus (vlPAG/DRN): A voltage-clamp and computational modelling study. Journal of computational neuroscience. 42 [PubMed]

Du JL, Yang XL. (2002). Glycinergic synaptic transmission to bullfrog retinal bipolar cells is input-specific. Neuroscience. 113 [PubMed]

Duijnhouwer J, Remme MWH, Ooyen VANA, Pelt VANJ. (2001). Influence of dendritic topology on firing patterns in model neurons Neurocomputing. 38

Durstewitz D, Gabriel T. (2007). Dynamical basis of irregular spiking in NMDA-driven prefrontal cortex neurons. Cerebral cortex (New York, N.Y. : 1991). 17 [PubMed]

Dyhrfjeld-Johnsen J et al. (2007). Topological determinants of epileptogenesis in large-scale structural and functional models of the dentate gyrus derived from experimental data. Journal of neurophysiology. 97 [PubMed]

Egger R et al. (2020). Cortical Output Is Gated by Horizontally Projecting Neurons in the Deep Layers Neuron. 105

Egger R et al. (2015). Robustness of sensory-evoked excitation is increased by inhibitory inputs to distal apical tuft dendrites. Proceedings of the National Academy of Sciences of the United States of America. 112 [PubMed]

Einevoll GT, Ness TV, Miceli S. (2017). Impedance Spectrum in Cortical Tissue: Implications for Propagation of LFP Signals on the Microscopic Level Eneuro. 4

Elbasiouny SM, Bennett DJ, Mushahwar VK. (2005). Simulation of dendritic CaV1.3 channels in cat lumbar motoneurons: spatial distribution. Journal of neurophysiology. 94 [PubMed]

Elbasiouny SM, Bennett DJ, Mushahwar VK. (2006). Simulation of Ca2+ persistent inward currents in spinal motoneurones: mode of activation and integration of synaptic inputs. The Journal of physiology. 570 [PubMed]

Elbasiouny SM, Mushahwar VK. (2007). Suppressing the excitability of spinal motoneurons by extracellularly applied electrical fields: insights from computer simulations. Journal of applied physiology (Bethesda, Md. : 1985). 103 [PubMed]

Elbasiouny SM, Mushahwar VK. (2007). Modulation of motoneuronal firing behavior after spinal cord injury using intraspinal microstimulation current pulses: a modeling study. Journal of applied physiology (Bethesda, Md. : 1985). 103 [PubMed]

Farrow K, Haag J, Borst A. (2006). Nonlinear, binocular interactions underlying flow field selectivity of a motion-sensitive neuron. Nature neuroscience. 9 [PubMed]

Fellous JM, Rudolph M, Destexhe A, Sejnowski TJ. (2003). Synaptic background noise controls the input/output characteristics of single cells in an in vitro model of in vivo activity. Neuroscience. 122 [PubMed]

Fellous JM, Sejnowski TJ, Houweling AR, Modi RH, Ganter P. (2001). Models of frequency preferences of prefrontal cortical neurons. Neurocomputing. 38

Feng J, Zhang P. (2001). Behavior of integrate-and-fire and Hodgkin-Huxley models with correlated inputs. Physical review. E, Statistical, nonlinear, and soft matter physics. 63 [PubMed]

Fernández de Sevilla D, Fuenzalida M, Porto Pazos AB, Buño W. (2007). Selective shunting of the NMDA EPSP component by the slow afterhyperpolarization in rat CA1 pyramidal neurons. Journal of neurophysiology. 97 [PubMed]

Ferrante M, Ascoli GA. (2015). Distinct and synergistic feedforward inhibition of pyramidal cells by basket and bistratified interneurons. Frontiers in cellular neuroscience. 9 [PubMed]

Ferrante M, Blackwell KT, Migliore M, Ascoli GA. (2008). Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets. Current medicinal chemistry. 15 [PubMed]

Ferrante M, Migliore M, Ascoli GA. (2013). Functional impact of dendritic branch-point morphology. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

Fineberg JD, Ritter DM, Covarrubias M. (2012). Modeling-independent elucidation of inactivation pathways in recombinant and native A-type Kv channels. The Journal of general physiology. 140 [PubMed]

Fink CG, Gliske S, Catoni N, Stacey WC. (2015). Network Mechanisms Generating Abnormal and Normal Hippocampal High-Frequency Oscillations: A Computational Analysis. eNeuro. 2 [PubMed]

Fleidervish IA, Lasser-Ross N, Gutnick MJ, Ross WN. (2010). Na+ imaging reveals little difference in action potential-evoked Na+ influx between axon and soma. Nature neuroscience. 13 [PubMed]

Fleidervish IA, Libman L. (2008). How cesium dialysis affects the passive properties of pyramidal neurons: implications for voltage clamp studies of persistent sodium current. Art. No. 035001 New Journal of Physics. 10

Fleidervish IA, Libman L, Katz E, Gutnick MJ. (2008). Endogenous polyamines regulate cortical neuronal excitability by blocking voltage-gated Na+ channels. Proceedings of the National Academy of Sciences of the United States of America. 105 [PubMed]

Forrest MD. (2015). Simulation of alcohol action upon a detailed Purkinje neuron model and a simpler surrogate model that runs >400 times faster. BMC neuroscience. 16 [PubMed]

Forsythe ID, Graham BP, Wong AYC. (2001). A computational model of synaptic transmission at the calyx of Held Neurocomputing. 38

Foust AJ, Yu Y, Popovic M, Zecevic D, McCormick DA. (2011). Somatic membrane potential and Kv1 channels control spike repolarization in cortical axon collaterals and presynaptic boutons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

Franks KM, Sejnowski TJ. (2002). Complexity of calcium signaling in synaptic spines. BioEssays : news and reviews in molecular, cellular and developmental biology. 24 [PubMed]

Fransen E. (2007). Neural response profile design: Reducing epileptogenic activity by modifying neuron responses to synchronized input using novel potassium channels obtained by parameter search optimization Neurocomputing. 70(10-12)

Frey U, Egert U, Heer F, Hafizovic S, Hierlemann A. (2009). Microelectronic system for high-resolution mapping of extracellular electric fields applied to brain slices. Biosensors & bioelectronics. 24 [PubMed]

Földy C, Aradi I, Howard A, Soltesz I. (2004). Diversity beyond variance: modulation of firing rates and network coherence by GABAergic subpopulations. The European journal of neuroscience. 19 [PubMed]

Gaines JL, Finn KE, Slopsema JP, Heyboer LA, Polasek KH. (2018). A model of motor and sensory axon activation in the median nerve using surface electrical stimulation. Journal of computational neuroscience. 45 [PubMed]

Galati DF, Hiester BG, Jones KR. (2016). Computer Simulations Support a Morphological Contribution to BDNF Enhancement of Action Potential Generation. Frontiers in cellular neuroscience. 10 [PubMed]

Gao PP et al. (2021). Local Glutamate-Mediated Dendritic Plateau Potentials Change the State of the Cortical Pyramidal Neuron. Journal of neurophysiology. 125 [PubMed]

García-Grajales JA, Rucabado G, García-Dopico A, Peña JM, Jérusalem A. (2015). Neurite, a finite difference large scale parallel program for the simulation of electrical signal propagation in neurites under mechanical loading. PloS one. 10 [PubMed]

Gasparini S, Migliore M, Magee JC. (2004). On the initiation and propagation of dendritic spikes in CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

Gertler TS, Chan CS, Surmeier DJ. (2008). Dichotomous anatomical properties of adult striatal medium spiny neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Gidon A, Segev I. (2012). Principles governing the operation of synaptic inhibition in dendrites. Neuron. 75 [PubMed]

Gilbert JE, Titus N, Zhang T, Esteller R, Grill WM. (2022). Surround Inhibition Mediates Pain Relief by Low Amplitude Spinal Cord Stimulation: Modeling and Measurement eNeuro. 9 [PubMed]

Gillies A, Willshaw D. (2006). Membrane channel interactions underlying rat subthalamic projection neuron rhythmic and bursting activity. Journal of neurophysiology. 95 [PubMed]

Gleeson P, Steuber V, Silver RA. (2007). neuroConstruct: a tool for modeling networks of neurons in 3D space. Neuron. 54 [PubMed]

Gold C, Henze DA, Koch C. (2007). Using extracellular action potential recordings to constrain compartmental models. Journal of computational neuroscience. 23 [PubMed]

Gold C, Henze DA, Koch C, Buzsáki G. (2006). On the origin of the extracellular action potential waveform: A modeling study. Journal of neurophysiology. 95 [PubMed]

Golding NL, Kath WL, Spruston N. (2001). Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites. Journal of neurophysiology. 86 [PubMed]

Golding NL, Mickus TJ, Katz Y, Kath WL, Spruston N. (2005). Factors mediating powerful voltage attenuation along CA1 pyramidal neuron dendrites. The Journal of physiology. 568 [PubMed]

Gorin M et al. (2016). Interdependent Conductances Drive Infraslow Intrinsic Rhythmogenesis in a Subset of Accessory Olfactory Bulb Projection Neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 36 [PubMed]

Gouwens NW, Wilson RI. (2009). Signal propagation in Drosophila central neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 29 [PubMed]

Gow A, Devaux J. (2008). A model of tight junction function in central nervous system myelinated axons. Neuron glia biology. 4 [PubMed]

Graham BP. (2001). Pattern recognition in a compartmental model of a CA1 pyramidal neuron. Network (Bristol, England). 12 [PubMed]

Graham BP, van Ooyen A. (2006). Mathematical modelling and numerical simulation of the morphological development of neurons. BMC neuroscience. 7 Suppl 1 [PubMed]

Grau-Serrat V, Carr CE, Simon JZ. (2003). Modeling coincidence detection in nucleus laminaris. Biological cybernetics. 89 [PubMed]

Grill WM et al. (2005). Temporal excitation properties of paresthesias evoked by thalamic microstimulation. Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. 116 [PubMed]

Groen MR et al. (2014). Development of dendritic tonic GABAergic inhibition regulates excitability and plasticity in CA1 pyramidal neurons. Journal of neurophysiology. 112 [PubMed]

Grosche J, Kettenmann H, Reichenbach A. (2002). Bergmann glial cells form distinct morphological structures to interact with cerebellar neurons. Journal of neuroscience research. 68 [PubMed]

Grossman N et al. (2013). The spatial pattern of light determines the kinetics and modulates backpropagation of optogenetic action potentials. Journal of computational neuroscience. 34 [PubMed]

Grunditz A, Holbro N, Tian L, Zuo Y, Oertner TG. (2008). Spine neck plasticity controls postsynaptic calcium signals through electrical compartmentalization. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Guo T et al. (2016). Electrical activity of ON and OFF retinal ganglion cells: a modelling study. Journal of neural engineering. 13 [PubMed]

Gurkiewicz M, Korngreen A. (2007). A numerical approach to ion channel modelling using whole-cell voltage-clamp recordings and a genetic algorithm. PLoS computational biology. 3 [PubMed]

Gómez González JF, Mel BW, Poirazi P. (2011). Distinguishing Linear vs. Non-Linear Integration in CA1 Radial Oblique Dendrites: It's about Time. Frontiers in computational neuroscience. 5 [PubMed]

Głąbska H, Chintaluri C, Wójcik DK. (2017). Collection of Simulated Data from a Thalamocortical Network Model. Neuroinformatics. 15 [PubMed]

Halnes G, Augustinaite S, Heggelund P, Einevoll GT, Migliore M. (2011). A multi-compartment model for interneurons in the dorsal lateral geniculate nucleus. PLoS computational biology. 7 [PubMed]

Hardie JB, Pearce RA. (2006). Active and passive membrane properties and intrinsic kinetics shape synaptic inhibition in hippocampal CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Hariani HN et al. (2023). A system of feed-forward cerebellar circuits that extend and diversify sensory signaling. eLife. [PubMed]

Haug SJ, Segal SS. (2005). Sympathetic neural inhibition of conducted vasodilatation along hamster feed arteries: complementary effects of alpha1- and alpha2-adrenoreceptor activation. The Journal of physiology. 563 [PubMed]

Hayashida Y, Yagi T. (2002). On the interaction between voltage-gated conductances and Ca(2+) regulation mechanisms in retinal horizontal cells. Journal of neurophysiology. 87 [PubMed]

Hayashida Y, Yagi T. (2002). Contribution of Ca2+ transporters to electrical response of a non-spiking retinal neuron Neurocomputing. 44

Heck D, Borst A, Antkowiak B. (2003). Passive spatial and temporal integration of excitatory synaptic inputs in cerebellar Purkinje cells of young rats. Neuroscience letters. 341 [PubMed]

Helmstaedter M, Sakmann B, Feldmeyer D. (2009). The relation between dendritic geometry, electrical excitability, and axonal projections of L2/3 interneurons in rat barrel cortex. Cerebral cortex (New York, N.Y. : 1991). 19 [PubMed]

Hemond P et al. (2008). Distinct classes of pyramidal cells exhibit mutually exclusive firing patterns in hippocampal area CA3b. Hippocampus. 18 [PubMed]

Hemond P, Migliore M, Ascoli GA, Jaffe DB. (2009). The membrane response of hippocampal CA3b pyramidal neurons near rest: Heterogeneity of passive properties and the contribution of hyperpolarization-activated currents. Neuroscience. 160 [PubMed]

Henderson D, Miller RF. (2003). Evidence for low-voltage-activated (LVA) calcium currents in the dendrites of tiger salamander retinal ganglion cells. Visual neuroscience. 20 [PubMed]

Herrmann U, Flanders M. (1998). Directional tuning of single motor units. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Herzog RI, Cummins TR, Waxman SG. (2001). Persistent TTX-resistant Na+ current affects resting potential and response to depolarization in simulated spinal sensory neurons. Journal of neurophysiology. 86 [PubMed]

Higley MJ, Contreras D. (2006). Balanced excitation and inhibition determine spike timing during frequency adaptation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Hilgetag CC, Barbas H. (2005). Developmental mechanics of the primate cerebral cortex. Anatomy and embryology. 210 [PubMed]

Hines M, Kumar S, Schürmann F. (2011). Comparison of neuronal spike exchange methods on a Blue Gene/P supercomputer. Frontiers in computational neuroscience. 5 [PubMed]

Hines ML, Carnevale NT. (2001). NEURON: a tool for neuroscientists. The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry. 7 [PubMed]

Hines ML, Carnevale NT. (2004). Discrete event simulation in the NEURON environment. Neurocomputing. 58-60

Hines ML, Eichner H, Schürmann F. (2008). Neuron splitting in compute-bound parallel network simulations enables runtime scaling with twice as many processors. Journal of computational neuroscience. 25 [PubMed]

Hines ML, Markram H, Schürmann F. (2008). Fully implicit parallel simulation of single neurons. Journal of computational neuroscience. 25 [PubMed]

Hiratani N, Fukai T. (2018). Redundancy in synaptic connections enables neurons to learn optimally. Proceedings of the National Academy of Sciences of the United States of America. 115 [PubMed]

Hoch T, Wenning G, Obermayer K. (2003). Optimal noise-aided signal transmission through populations of neurons. Physical review. E, Statistical, nonlinear, and soft matter physics. 68 [PubMed]

Holmes WR, Ambros-Ingerson J, Grover LM. (2006). Fitting experimental data to models that use morphological data from public databases. Journal of computational neuroscience. 20 [PubMed]

Holmes WR, Grover LM. (2006). Quantifying the magnitude of changes in synaptic level parameters with long-term potentiation. Journal of neurophysiology. 96 [PubMed]

Hong S, Ratté S, Prescott SA, De Schutter E. (2012). Single neuron firing properties impact correlation-based population coding. The Journal of neuroscience : the official journal of the Society for Neuroscience. 32 [PubMed]

Houweling AR et al. (2002). Frequency-selective augmenting responses by short-term synaptic depression in cat neocortex. The Journal of physiology. 542 [PubMed]

Howard AL, Neu A, Morgan RJ, Echegoyen JC, Soltesz I. (2007). Opposing modifications in intrinsic currents and synaptic inputs in post-traumatic mossy cells: evidence for single-cell homeostasis in a hyperexcitable network. Journal of neurophysiology. 97 [PubMed]

Hsu CL, Zhao X, Milstein AD, Spruston N. (2018). Persistent sodium current mediates the steep voltage dependence of spatial coding in hippocampal pyramidal neurons Neuron. 99

Hu W et al. (2009). Distinct contributions of Na(v)1.6 and Na(v)1.2 in action potential initiation and backpropagation. Nature neuroscience. 12 [PubMed]

Huguenard JR, Sohal VS. (2002). Reciprocal inhibition controls the oscillatory state in thalamic networks Neurocomputing. 44

Huguenard JR, Sohal VS, Huntsman MM. (2000). Reciprocal inhibitory connections produce desynchronizing phase lags during intrathalamic oscillations Neurocomputing. 32

Häusser M, Major G, Stuart GJ. (2001). Differential shunting of EPSPs by action potentials. Science (New York, N.Y.). 291 [PubMed]

Häusser M, Spruston N, Stuart GJ. (2000). Diversity and dynamics of dendritic signaling. Science (New York, N.Y.). 290 [PubMed]

Hô N, Destexhe A. (2000). Synaptic background activity enhances the responsiveness of neocortical pyramidal neurons. Journal of neurophysiology. 84 [PubMed]

Iavarone E et al. (2019). Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons. PLoS computational biology. 15 [PubMed]

Igras E, Foweraker JP, Ware A, Hulliger M. (1998). Computer simulation of rhythm-generating networks. Annals of the New York Academy of Sciences. 860 [PubMed]

Inoue M, Hashimoto Y, Kudo Y, Miyakawa H. (2001). Dendritic attenuation of synaptic potentials in the CA1 region of rat hippocampal slices detected with an optical method. The European journal of neuroscience. 13 [PubMed]

Inoue M, lin H, Imanaga I, Ogawa K, Warashina A. (2004). InsP3 receptor type 2 and oscillatory and monophasic Ca2+ transients in rat adrenal chromaffin cells. Cell calcium. 35 [PubMed]

Jacobson GA et al. (2005). Subthreshold voltage noise of rat neocortical pyramidal neurones. The Journal of physiology. 564 [PubMed]

Jacoby J, Nath A, Jessen ZF, Schwartz GW. (2018). A Self-Regulating Gap Junction Network of Amacrine Cells Controls Nitric Oxide Release in the Retina. Neuron. 100 [PubMed]

Jaffe DB, Brenner R. (2018). A computational model for how the fast afterhyperpolarization paradoxically increases gain in regularly firing neurons. Journal of neurophysiology. 119 [PubMed]

Jaffe DB, Carnevale NT. (1999). Passive normalization of synaptic integration influenced by dendritic architecture. Journal of neurophysiology. 82 [PubMed]

Jaffe DB, Wang B, Brenner R. (2011). Shaping of action potentials by type I and type II large-conductance Ca²+-activated K+ channels. Neuroscience. 192 [PubMed]

Jamieson J, Boyd HD, McLachlan EM. (2003). Simulations to derive membrane resistivity in three phenotypes of guinea pig sympathetic postganglionic neuron. Journal of neurophysiology. 89 [PubMed]

Jarsky T, Roxin A, Kath WL, Spruston N. (2005). Conditional dendritic spike propagation following distal synaptic activation of hippocampal CA1 pyramidal neurons. Nature neuroscience. 8 [PubMed]

Jedlicka P, Benuskova L, Abraham WC. (2015). A Voltage-Based STDP Rule Combined with Fast BCM-Like Metaplasticity Accounts for LTP and Concurrent "Heterosynaptic" LTD in the Dentate Gyrus In Vivo. PLoS computational biology. 11 [PubMed]

Jedlicka P et al. (2011). Increased dentate gyrus excitability in neuroligin-2-deficient mice in vivo. Cerebral cortex (New York, N.Y. : 1991). 21 [PubMed]

Joels M, Poirazi P, Sidiropoulou K. (2007). Modeling stress-induced adaptations in Ca2+ dynamics Neurocomputing. 70

Johnson MD, McIntyre CC. (2008). Quantifying the neural elements activated and inhibited by globus pallidus deep brain stimulation. Journal of neurophysiology. 100 [PubMed]

Jones PW, Gabbiani F. (2012). Impact of neural noise on a sensory-motor pathway signaling impending collision. Journal of neurophysiology. 107 [PubMed]

Jones PW, Gabbiani F. (2012). Logarithmic compression of sensory signals within the dendritic tree of a collision-sensitive neuron. The Journal of neuroscience : the official journal of the Society for Neuroscience. 32 [PubMed]

Justus D et al. (2017). Glutamatergic synaptic integration of locomotion speed via septoentorhinal projections. Nature neuroscience. 20 [PubMed]

Kager H, Wadman WJ, Somjen GG. (2000). Simulated seizures and spreading depression in a neuron model incorporating interstitial space and ion concentrations. Journal of neurophysiology. 84 [PubMed]

Kager H, Wadman WJ, Somjen GG. (2002). Conditions for the triggering of spreading depression studied with computer simulations. Journal of neurophysiology. 88 [PubMed]

Kager H, Wadman WJ, Somjen GG. (2007). Seizure-like afterdischarges simulated in a model neuron. Journal of computational neuroscience. 22 [PubMed]

Kampa BM, Stuart GJ. (2006). Calcium spikes in basal dendrites of layer 5 pyramidal neurons during action potential bursts. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Kanold PO, Manis PB. (2001). A physiologically based model of discharge pattern regulation by transient K+ currents in cochlear nucleus pyramidal cells. Journal of neurophysiology. 85 [PubMed]

Kaplan BA, Lansner A. (2014). A spiking neural network model of self-organized pattern recognition in the early mammalian olfactory system. Frontiers in neural circuits. 8 [PubMed]

Karmarkar UR, Najarian MT, Buonomano DV. (2002). Mechanisms and significance of spike-timing dependent plasticity. Biological cybernetics. 87 [PubMed]

Katz Y et al. (2009). Synapse distribution suggests a two-stage model of dendritic integration in CA1 pyramidal neurons. Neuron. 63 [PubMed]

Keren N, Peled N, Korngreen A. (2005). Constraining compartmental models using multiple voltage recordings and genetic algorithms. Journal of neurophysiology. 94 [PubMed]

Khaliq ZM, Gouwens NW, Raman IM. (2003). The contribution of resurgent sodium current to high-frequency firing in Purkinje neurons: an experimental and modeling study. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Khatri SN, Wu WC, Yang Y, Pugh JR. (2019). Mechanisms of GABAB receptor enhancement of extrasynaptic GABAA receptor currents in cerebellar granule cells. Scientific reports. 9 [PubMed]

Kim H. (2017). Impact of the localization of dendritic calcium persistent inward current on the input-output properties of spinal motoneuron pool: a computational study. Journal of applied physiology (Bethesda, Md. : 1985). 123 [PubMed]

Kim H. (2017). Muscle length-dependent contribution of motoneuron Cav1.3 channels to force production in model slow motor unit. Journal of applied physiology (Bethesda, Md. : 1985). 123 [PubMed]

Kim H. (2020). Linking Motoneuron PIC Location to Motor Function in Closed-Loop Motor Unit System Including Afferent Feedback: A Computational Investigation. eNeuro. 7 [PubMed]

Kim H, Jones KE, Heckman CJ. (2014). Asymmetry in signal propagation between the soma and dendrites plays a key role in determining dendritic excitability in motoneurons. PloS one. 9 [PubMed]

Kim H, Kim M. (2018). PyMUS: Python-Based Simulation Software for Virtual Experiments on Motor Unit System. Frontiers in neuroinformatics. 12 [PubMed]

Kim J et al. (2008). Kv4 accessory protein DPPX (DPP6) is a critical regulator of membrane excitability in hippocampal CA1 pyramidal neurons. Journal of neurophysiology. 100 [PubMed]

Kim JK, Fiorillo CD. (2017). Theory of optimal balance predicts and explains the amplitude and decay time of synaptic inhibition. Nature communications. 8 [PubMed]

Kim Y, Hsu CL, Cembrowski MS, Mensh BD, Spruston N. (2015). Dendritic sodium spikes are required for long-term potentiation at distal synapses on hippocampal pyramidal neurons. eLife. 4 [PubMed]

Kobayashi R, Tsubo Y, Shinomoto S. (2009). Made-to-order spiking neuron model equipped with a multi-timescale adaptive threshold. Frontiers in computational neuroscience. 3 [PubMed]

Kochubey S, Savtchenko L. (2008). Geometrical size of the neuronal network plays a key role in synchronization of its activity Neurophysiology. 40(3)

Koene RA et al. (2009). NETMORPH: a framework for the stochastic generation of large scale neuronal networks with realistic neuron morphologies. Neuroinformatics. 7 [PubMed]

Komendantov AO, Ascoli GA. (2009). Dendritic excitability and neuronal morphology as determinants of synaptic efficacy. Journal of neurophysiology. 101 [PubMed]

Koos T, Tepper JM, Wilson CJ. (2004). Comparison of IPSCs evoked by spiny and fast-spiking neurons in the neostriatum. The Journal of neuroscience : the official journal of the Society for Neuroscience. 24 [PubMed]

Kopell N, Borgers C, Pervouchine D, Tort AB, Malerba P. (2010). Gamma and theta rhythms in biophysical models of hippocampal circuits Hippocampal Microcircuits: A Computational Modeller`s Resource Book. Ch. 15..

Kovalsky Y, Amir R, Devor M. (2008). Subthreshold oscillations facilitate neuropathic spike discharge by overcoming membrane accommodation. Experimental neurology. 210 [PubMed]

Kovalsky Y, Amir R, Devor M. (2009). Simulation in sensory neurons reveals a key role for delayed Na+ current in subthreshold oscillations and ectopic discharge: implications for neuropathic pain. Journal of neurophysiology. 102 [PubMed]

Kozloski J, Wagner J. (2011). An Ultrascalable Solution to Large-scale Neural Tissue Simulation. Frontiers in neuroinformatics. 5 [PubMed]

Kretzberg J, Kretschmer F, Marin-Burgin A. (2007). Effects of multiple spike-initiation zones in touch sensory cells of the leech , Volume 70, Issues 10-12, June 2007, Pages 1645-1651 Neurocomputing. 70

Kubota Y et al. (2011). Conserved properties of dendritic trees in four cortical interneuron subtypes. Scientific reports. 1 [PubMed]

Kubota Y et al. (2015). Functional effects of distinct innervation styles of pyramidal cells by fast spiking cortical interneurons. eLife. 4 [PubMed]

Kufel DS, Wojcik GM. (2018). Analytical modelling of temperature effects on an AMPA-type synapse. Journal of computational neuroscience. 44 [PubMed]

Kuo JJ, Lee RH, Zhang L, Heckman CJ. (2006). Essential role of the persistent sodium current in spike initiation during slowly rising inputs in mouse spinal neurones. The Journal of physiology. 574 [PubMed]

Kuznetsova AY, Huertas MA, Kuznetsov AS, Paladini CA, Canavier CC. (2010). Regulation of firing frequency in a computational model of a midbrain dopaminergic neuron. Journal of computational neuroscience. 28 [PubMed]

Lasiene J, Shupe L, Perlmutter S, Horner P. (2008). No evidence for chronic demyelination in spared axons after spinal cord injury in a mouse. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Lazar AA, Liu T, Turkcan MK, Zhou Y. (2021). Accelerating with FlyBrainLab the discovery of the functional logic of the Drosophila brain in the connectomic and synaptomic era eLife. 10 [PubMed]

Le Franc Y, Le Masson G. (2010). Multiple firing patterns in deep dorsal horn neurons of the spinal cord: computational analysis of mechanisms and functional implications. Journal of neurophysiology. 104 [PubMed]

Le Masson G, Przedborski S, Abbott LF. (2014). A computational model of motor neuron degeneration. Neuron. 83 [PubMed]

Lee DC, Jensen AL, Schiefer MA, Morgan CW, Grill WM. (2005). Structural mechanisms to produce differential dendritic gains. Brain research. 1033 [PubMed]

Lee SC, Hayashida Y, Ishida AT. (2003). Availability of low-threshold Ca2+ current in retinal ganglion cells. Journal of neurophysiology. 90 [PubMed]

Letzkus JJ, Kampa BM, Stuart GJ. (2006). Learning rules for spike timing-dependent plasticity depend on dendritic synapse location. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Leys SP, Mackie GO, Meech RW. (1999). Impulse conduction in a sponge. The Journal of experimental biology. 202 (Pt 9) [PubMed]

Lezmy J et al. (2017). M-current inhibition rapidly induces a unique CK2-dependent plasticity of the axon initial segment. Proceedings of the National Academy of Sciences of the United States of America. 114 [PubMed]

Liebmann L et al. (2008). Differential effects of corticosterone on the slow afterhyperpolarization in the basolateral amygdala and CA1 region: possible role of calcium channel subunits. Journal of neurophysiology. 99 [PubMed]

Lin X, Hant J. (2001). Computer-simulation studies on roles of potassium currents in neurotransmission of the auditory nerve. Hearing research. 152 [PubMed]

Lin Z et al. (1999). Alternative splicing of a short cassette exon in alpha1B generates functionally distinct N-type calcium channels in central and peripheral neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

Lindroos R et al. (2018). Basal Ganglia Neuromodulation Over Multiple Temporal and Structural Scales-Simulations of Direct Pathway MSNs Investigate the Fast Onset of Dopaminergic Effects and Predict the Role of Kv4.2. Frontiers in neural circuits. 12 [PubMed]

Lindsay AE, Lindsay KA, Rosenberg JR. (2005). Increased computational accuracy in multi-compartmental cable models by a novel approach for precise point process localization. Journal of computational neuroscience. 19 [PubMed]

Liu CY, Xiao C, Fraser SE, Lester HA, Koos DS. (2012). Electrophysiological characterization of Grueneberg ganglion olfactory neurons: spontaneous firing, sodium conductance, and hyperpolarization-activated currents. Journal of neurophysiology. 108 [PubMed]

Liu Z, Ren J, Murphy TH. (2003). Decoding of synaptic voltage waveforms by specific classes of recombinant high-threshold Ca(2+) channels. The Journal of physiology. 553 [PubMed]

London M, Meunier C, Segev I. (1999). Signal transfer in passive dendrites with nonuniform membrane conductance. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

London M, Schreibman A, Häusser M, Larkum ME, Segev I. (2002). The information efficacy of a synapse. Nature neuroscience. 5 [PubMed]

London M, Segev I. (2001). Synaptic scaling in vitro and in vivo. Nature neuroscience. 4 [PubMed]

Lopreore CL et al. (2008). Computational modeling of three-dimensional electrodiffusion in biological systems: application to the node of Ranvier. Biophysical journal. 95 [PubMed]

Lowe G. (2002). Inhibition of backpropagating action potentials in mitral cell secondary dendrites. Journal of neurophysiology. 88 [PubMed]

Lubba CH et al. (2019). PyPNS: Multiscale Simulation of a Peripheral Nerve in Python. Neuroinformatics. 17 [PubMed]

Luthman J et al. (2011). STD-dependent and independent encoding of input irregularity as spike rate in a computational model of a cerebellar nucleus neuron. Cerebellum (London, England). 10 [PubMed]

López-Jury L, Meza RC, Brown MTC, Henny P, Canavier CC. (2018). Morphological and Biophysical Determinants of the Intracellular and Extracellular Waveforms in Nigral Dopaminergic Neurons: A Computational Study. The Journal of neuroscience : the official journal of the Society for Neuroscience. 38 [PubMed]

Magalhães B, Hines M, Sterling T, Schüermann F. (2019). Exploiting Flow Graph of System of ODEs to Accelerate the Simulation of Biologically-Detailed Neural Networks 2019 IEEE International Parallel and Distributed Processing Symposium (IPDPS).

Magalhães BR, Sterling T, Hines M, Schürmann F. (2019). Fully-Asynchronous Cache-Efficient Simulation of Detailed Neural Networks Computational Science -- ICCS 2019.

Magalhães BRC, Sterling T, Hines M, Schürmann F. (2019). Asynchronous Branch-Parallel Simulation of Detailed Neuron Models. Frontiers in neuroinformatics. 13 [PubMed]

Magee JC, Cook EP. (2001). Synaptic scaling in vitro and in vivo - Reply Nature Neuroscience. 4

Magistretti J, Castelli L, Forti L, D'Angelo E. (2006). Kinetic and functional analysis of transient, persistent and resurgent sodium currents in rat cerebellar granule cells in situ: an electrophysiological and modelling study. The Journal of physiology. 573 [PubMed]

Mahapatra C, Brain KL, Manchanda R. (2018). A biophysically constrained computational model of the action potential of mouse urinary bladder smooth muscle. PloS one. 13 [PubMed]

Mahnam A, Hashemi SM, Grill WM. (2008). Computational evaluation of methods for measuring the spatial extent of neural activation. Journal of neuroscience methods. 173 [PubMed]

Mandge D, Manchanda R. (2015). Computational studies on bladder small dorsal root ganglion neurons: Modelling BK channels. Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference. 2015 [PubMed]

Mandge D, Manchanda R. (2018). A biophysically detailed computational model of urinary bladder small DRG neuron soma. PLoS computational biology. 14 [PubMed]

Manis PB, Campagnola L. (2018). A biophysical modelling platform of the cochlear nucleus and other auditory circuits: From channels to networks. Hearing research. 360 [PubMed]

Marasco A, Limongiello A, Migliore M. (2012). Fast and accurate low-dimensional reduction of biophysically detailed neuron models. Scientific reports. 2 [PubMed]

Marasco A, Limongiello A, Migliore M. (2013). Using Strahler's analysis to reduce up to 200-fold the run time of realistic neuron models. Scientific reports. 3 [PubMed]

Marasco A et al. (2023). An Adaptive Generalized Leaky Integrate-and-Fire Model for Hippocampal CA1 Pyramidal Neurons and Interneurons. Bulletin of mathematical biology. 85 [PubMed]

Marcelin B et al. (2009). h channel-dependent deficit of theta oscillation resonance and phase shift in temporal lobe epilepsy. Neurobiology of disease. 33 [PubMed]

Markram H et al. (2015). Reconstruction and Simulation of Neocortical Microcircuitry. Cell. 163 [PubMed]

Martinello K, Giacalone E, Migliore M, Brown DA, Shah MM. (2019). The subthreshold-active KV7 current regulates neurotransmission by limiting spike-induced Ca2+ influx in hippocampal mossy fiber synaptic terminals. Communications biology. 2 [PubMed]

Martínez-Cañada P, Morillas C, Pino B, Ros E, Pelayo F. (2016). A Computational Framework for Realistic Retina Modeling. International journal of neural systems. 26 [PubMed]

Masurkar AV, Chen WR. (2011). Calcium currents of olfactory bulb juxtaglomerular cells: profile and multiple conductance plateau potential simulation. Neuroscience. 192 [PubMed]

Masurkar AV, Chen WR. (2011). Potassium currents of olfactory bulb juxtaglomerular cells: characterization, simulation, and implications for plateau potential firing. Neuroscience. 192 [PubMed]

McCauley JP et al. (2020). Circadian Modulation of Neurons and Astrocytes Controls Synaptic Plasticity in Hippocampal Area CA1. Cell reports. 33 [PubMed]

McColgan T et al. (2017). Dipolar extracellular potentials generated by axonal projections. eLife. 6 [PubMed]

McDougal RA, Shepherd GM. (2015). 3D-printer visualization of neuron models. Frontiers in neuroinformatics. 9 [PubMed]

McIntyre CC, Grill WM. (1999). Excitation of central nervous system neurons by nonuniform electric fields. Biophysical journal. 76 [PubMed]

McIntyre CC, Grill WM. (2000). Selective microstimulation of central nervous system neurons. Annals of biomedical engineering. 28 [PubMed]

McIntyre CC, Grill WM. (2002). Extracellular stimulation of central neurons: influence of stimulus waveform and frequency on neuronal output. Journal of neurophysiology. 88 [PubMed]

McIntyre CC, Grill WM, Sherman DL, Thakor NV. (2004). Cellular effects of deep brain stimulation: model-based analysis of activation and inhibition. Journal of neurophysiology. 91 [PubMed]

McTavish TS, Migliore M, Shepherd GM, Hines ML. (2012). Mitral cell spike synchrony modulated by dendrodendritic synapse location. Frontiers in computational neuroscience. 6 [PubMed]

Meffin H, Burkitt AN, Grayden DB. (2004). An analytical model for the "large, fluctuating synaptic conductance state" typical of neocortical neurons in vivo. Journal of computational neuroscience. 16 [PubMed]

Mehaffey WH, Doiron B, Maler L, Turner RW. (2005). Deterministic multiplicative gain control with active dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Melnick IV, Santos SF, Safronov BV. (2004). Mechanism of spike frequency adaptation in substantia gelatinosa neurones of rat. The Journal of physiology. 559 [PubMed]

Melnick IV, Santos SF, Szokol K, Szûcs P, Safronov BV. (2004). Ionic basis of tonic firing in spinal substantia gelatinosa neurons of rat. Journal of neurophysiology. 91 [PubMed]

Menon V et al. (2013). Balanced synaptic impact via distance-dependent synapse distribution and complementary expression of AMPARs and NMDARs in hippocampal dendrites. Neuron. 80 [PubMed]

Menon V, Spruston N, Kath WL. (2009). A state-mutating genetic algorithm to design ion-channel models. Proceedings of the National Academy of Sciences of the United States of America. 106 [PubMed]

Mercer JN, Chan CS, Tkatch T, Held J, Surmeier DJ. (2007). Nav1.6 sodium channels are critical to pacemaking and fast spiking in globus pallidus neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]

Meuth P et al. (2005). Get the rhythm: modeling neuronal activity. Journal of undergraduate neuroscience education : JUNE : a publication of FUN, Faculty for Undergraduate Neuroscience. 4 [PubMed]

Meuth SG et al. (2008). TWIK-related acid-sensitive K+ channel 1 (TASK1) and TASK3 critically influence T lymphocyte effector functions. The Journal of biological chemistry. 283 [PubMed]

Meza RC, López-Jury L, Canavier CC, Henny P. (2018). Role of the Axon Initial Segment in the Control of Spontaneous Frequency of Nigral Dopaminergic Neurons In Vivo. The Journal of neuroscience : the official journal of the Society for Neuroscience. 38 [PubMed]

Miceli F et al. (2013). Genotype-phenotype correlations in neonatal epilepsies caused by mutations in the voltage sensor of K(v)7.2 potassium channel subunits. Proceedings of the National Academy of Sciences of the United States of America. 110 [PubMed]

Miceli F et al. (2015). Early-onset epileptic encephalopathy caused by gain-of-function mutations in the voltage sensor of Kv7.2 and Kv7.3 potassium channel subunits. The Journal of neuroscience : the official journal of the Society for Neuroscience. 35 [PubMed]

Miceli F et al. (2009). Neutralization of a unique, negatively-charged residue in the voltage sensor of K V 7.2 subunits in a sporadic case of benign familial neonatal seizures. Neurobiology of disease. 34 [PubMed]

Migliore M. (2003). On the integration of subthreshold inputs from Perforant Path and Schaffer Collaterals in hippocampal CA1 pyramidal neurons. Journal of computational neuroscience. 14 [PubMed]

Migliore M, Cannia C, Canavier CC. (2008). A modeling study suggesting a possible pharmacological target to mitigate the effects of ethanol on reward-related dopaminergic signaling. Journal of neurophysiology. 99 [PubMed]

Migliore M, Cannia C, Lytton WW, Markram H, Hines ML. (2006). Parallel network simulations with NEURON. Journal of computational neuroscience. 21 [PubMed]

Migliore M, Cavarretta F, Hines ML, Shepherd GM. (2014). Distributed organization of a brain microcircuit analyzed by three-dimensional modeling: the olfactory bulb. Frontiers in computational neuroscience. 8 [PubMed]

Migliore M, De Blasi I, Tegolo D, Migliore R. (2011). A modeling study suggesting how a reduction in the context-dependent input on CA1 pyramidal neurons could generate schizophrenic behavior. Neural networks : the official journal of the International Neural Network Society. 24 [PubMed]

Migliore M, De Simone G, Migliore R. (2015). Effect of the initial synaptic state on the probability to induce long-term potentiation and depression. Biophysical journal. 108 [PubMed]

Migliore M, Ferrante M, Ascoli GA. (2005). Signal propagation in oblique dendrites of CA1 pyramidal cells. Journal of neurophysiology. 94 [PubMed]

Migliore M, Hines ML, McTavish TS, Shepherd GM. (2010). Functional roles of distributed synaptic clusters in the mitral-granule cell network of the olfactory bulb. Frontiers in integrative neuroscience. 4 [PubMed]

Migliore M, Hines ML, Shepherd GM. (2005). The role of distal dendritic gap junctions in synchronization of mitral cell axonal output. Journal of computational neuroscience. 18 [PubMed]

Migliore M, Hoffman DA, Magee JC, Johnston D. (1999). Role of an A-type K+ conductance in the back-propagation of action potentials in the dendrites of hippocampal pyramidal neurons. Journal of computational neuroscience. 7 [PubMed]

Migliore M, Inzirillo C, Shepherd GM. (2007). Learning mechanism for column formation in the olfactory bulb. Frontiers in integrative neuroscience. 1 [PubMed]

Migliore M, Messineo L, Cardaci M. (2000). A model of the effects of cognitive load on the subjective estimation and production of time intervals. Bio Systems. 58 [PubMed]

Migliore M, Messineo L, Cardaci M, Ayala GF. (2001). Quantitative modeling of perception and production of time intervals. Journal of neurophysiology. 86 [PubMed]

Migliore M, Messineo L, Ferrante M. (2004). Dendritic Ih selectively blocks temporal summation of unsynchronized distal inputs in CA1 pyramidal neurons. Journal of computational neuroscience. 16 [PubMed]

Migliore M, Novara G, Tegolo D. (2008). Single neuron binding properties and the magical number 7. Hippocampus. 18 [PubMed]

Migliore M, Shepherd GM. (2002). Emerging rules for the distributions of active dendritic conductances. Nature reviews. Neuroscience. 3 [PubMed]

Migliore M, Shepherd GM. (2008). Dendritic action potentials connect distributed dendrodendritic microcircuits. Journal of computational neuroscience. 24 [PubMed]

Migliore M, Tegolo D, Spera E, Unsworth N. (2016). On the cellular mechanisms underlying working memory capacity in humans Neural Network World. 4

Migliore R, De Simone G, Leinekugel X, Migliore M. (2017). The possible consequences for cognitive functions of external electric fields at power line frequency on hippocampal CA1 pyramidal neurons. The European journal of neuroscience. 45 [PubMed]

Minneci F et al. (2007). Signaling properties of stratum oriens interneurons in the hippocampus of transgenic mice expressing EGFP in a subset of somatostatin-containing cells. Hippocampus. 17 [PubMed]

Miocinovic S, Grill WM. (2004). Sensitivity of temporal excitation properties to the neuronal element activated by extracellular stimulation. Journal of neuroscience methods. 132 [PubMed]

Miocinovic S et al. (2006). Computational analysis of subthalamic nucleus and lenticular fasciculus activation during therapeutic deep brain stimulation. Journal of neurophysiology. 96 [PubMed]

Miyasho T et al. (2001). Low-threshold potassium channels and a low-threshold calcium channel regulate Ca2+ spike firing in the dendrites of cerebellar Purkinje neurons: a modeling study. Brain research. 891 [PubMed]

Mo CH, Gu M, Koch C. (2004). A learning rule for local synaptic interactions between excitation and shunting inhibition. Neural computation. 16 [PubMed]

Mo CH, Koch C. (2003). Modeling reverse-phi motion-selective neurons in cortex: double synaptic-veto mechanism. Neural computation. 15 [PubMed]

Moffitt MA, McIntyre CC, Grill WM. (2004). Prediction of myelinated nerve fiber stimulation thresholds: limitations of linear models. IEEE transactions on bio-medical engineering. 51 [PubMed]

Mohapatra DP et al. (2009). Regulation of intrinsic excitability in hippocampal neurons by activity-dependent modulation of the KV2.1 potassium channel. Channels (Austin, Tex.). 3 [PubMed]

Mondragón-González SL, Burguière E. (2017). Bio-inspired benchmark generator for extracellular multi-unit recordings. Scientific reports. 7 [PubMed]

Moraud EM et al. (2016). Mechanisms Underlying the Neuromodulation of Spinal Circuits for Correcting Gait and Balance Deficits after Spinal Cord Injury. Neuron. 89 [PubMed]

Morgan RJ, Soltesz I. (2008). Nonrandom connectivity of the epileptic dentate gyrus predicts a major role for neuronal hubs in seizures. Proceedings of the National Academy of Sciences of the United States of America. 105 [PubMed]

Moriyoshi Y, Takeuchi T. (1991). [Exocrine pancreatic function tests]. Rinsho byori. The Japanese journal of clinical pathology. Suppl 89 [PubMed]

Morrison A, Mehring C, Geisel T, Aertsen AD, Diesmann M. (2005). Advancing the boundaries of high-connectivity network simulation with distributed computing. Neural computation. 17 [PubMed]

Morse TM. (2008). ModelDB in computational neuroscience education - a research tool as interactive educational media. Brains, minds & media : journal of new media in neural and cognitive science and education. 3 [PubMed]

Morse TM, Carnevale NT, Mutalik PG, Migliore M, Shepherd GM. (2010). Abnormal Excitability of Oblique Dendrites Implicated in Early Alzheimer's: A Computational Study. Frontiers in neural circuits. 4 [PubMed]

Moubarak E et al. (2019). Robustness to Axon Initial Segment Variation Is Explained by Somatodendritic Excitability in Rat Substantia Nigra Dopaminergic Neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]

Mourdoukoutas AP, Truong DQ, Adair DK, Simon BJ, Bikson M. (2018). High-Resolution Multi-Scale Computational Model for Non-Invasive Cervical Vagus Nerve Stimulation. Neuromodulation : journal of the International Neuromodulation Society. 21 [PubMed]

Mousa MH, Elbasiouny SM. (2021). Estimating the effects of slicing on the electrophysiological properties of spinal motoneurons under normal and disease conditions. Journal of neurophysiology. 125 [PubMed]

Moustafa M, Mousa MH, Saad MS, Basha T, Elbasiouny SM. (2023). Bifurcation analysis of motoneuronal excitability mechanisms under normal and ALS conditions Frontiers in cellular neuroscience. 17 [PubMed]

Muller E, Buesing L, Schemmel J, Meier K. (2007). Spike-frequency adapting neural ensembles: beyond mean adaptation and renewal theories. Neural computation. 19 [PubMed]

Murphy BK, Miller KD. (2003). Multiplicative gain changes are induced by excitation or inhibition alone. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Mäki-Marttunen T et al. (2018). A stepwise neuron model fitting procedure designed for recordings with high spatial resolution: Application to layer 5 pyramidal cells. Journal of neuroscience methods. 293 [PubMed]

Mäki-Marttunen T et al. (2019). Alterations in Schizophrenia-Associated Genes Can Lead to Increased Power in Delta Oscillations. Cerebral cortex (New York, N.Y. : 1991). 29 [PubMed]

Mörschel K, Breit M, Queisser G. (2017). Generating Neuron Geometries for Detailed Three-Dimensional Simulations Using AnaMorph. Neuroinformatics. 15 [PubMed]

Narayanan R, Chattarji S. (2010). Computational analysis of the impact of chronic stress on intrinsic and synaptic excitability in the hippocampus. Journal of neurophysiology. 103 [PubMed]

Nenadic Z, Burdick JW. (2006). A control algorithm for autonomous optimization of extracellular recordings. IEEE transactions on bio-medical engineering. 53 [PubMed]

Neymotin SA et al. (2011). Ketamine disrupts ? modulation of ? in a computer model of hippocampus. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

Neymotin SA et al. (2011). Ketamine Disrupts Theta Modulation of Gamma in a Computer Model of Hippocampus The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]

Nicholson DA et al. (2006). Distance-dependent differences in synapse number and AMPA receptor expression in hippocampal CA1 pyramidal neurons. Neuron. 50 [PubMed]

O'Connor S, Angelo K, Jacob TJ. (2012). Burst firing versus synchrony in a gap junction connected olfactory bulb mitral cell network model Frontiers in computational neuroscience. 6 [PubMed]

Obi-Nagata K et al. (2023). Distorted neurocomputation by a small number of extra-large spines in psychiatric disorders Science Advances. 9(23) [PubMed]

Oertner TG, Tian L, Grunditz A, Holbro N, Zuo Y. (2008). Supplementary data to Spine Neck Plasticity Controls Postsynaptic Calcium Signals through Electrical Compartmentalization J Neurosci. 28(50)

Ohana O, Sakmann B. (1998). Transmitter release modulation in nerve terminals of rat neocortical pyramidal cells by intracellular calcium buffers. The Journal of physiology. 513 ( Pt 1) [PubMed]

Ohura S, Kamiya H. (2018). Sodium Channel-Dependent and -Independent Mechanisms Underlying Axonal Afterdepolarization at Mouse Hippocampal Mossy Fibers. eNeuro. 5 [PubMed]

Oltedal L, Mørkve SH, Veruki ML, Hartveit E. (2007). Patch-clamp investigations and compartmental modeling of rod bipolar axon terminals in an in vitro thin-slice preparation of the mammalian retina. Journal of neurophysiology. 97 [PubMed]

Oláh VJ, Tarcsay G, Brunner J. (2021). Small size of recorded neuronal structures confines the accuracy in direct axonal voltage measurements. eNeuro. 8 [PubMed]

Orio P et al. (2012). Role of Ih in the firing pattern of mammalian cold thermoreceptor endings. Journal of neurophysiology. 108 [PubMed]

Ostroumov K. (2007). A new stochastic tridimensional model of neonatal rat spinal motoneuron for investigating compartmentalization of neuronal conductances and their influence on firing. Journal of neuroscience methods. 163 [PubMed]

Overstreet CK, Klein JD, Helms Tillery SI. (2013). Computational modeling of direct neuronal recruitment during intracortical microstimulation in somatosensory cortex. Journal of neural engineering. 10 [PubMed]

Ovsepian SV et al. (2013). A defined heteromeric KV1 channel stabilizes the intrinsic pacemaking and regulates the output of deep cerebellar nuclear neurons to thalamic targets. The Journal of physiology. 591 [PubMed]

Ozer M, Graham LJ, Erkaymaz O, Uzuntarla M. (2007). Impact of synaptic noise and conductance state on spontaneous cortical firing. Neuroreport. 18 [PubMed]

Padmashri R, Ganguly A, Mondal PP, Rajan K, Sikdar SK. (2006). Kynurenate treatment of autaptic hippocampal microcultures affect localized voltage-dependent calcium diffusion in the dendrites. Cell calcium. 39 [PubMed]

Palmer LM, Stuart GJ. (2009). Membrane potential changes in dendritic spines during action potentials and synaptic input. The Journal of neuroscience : the official journal of the Society for Neuroscience. 29 [PubMed]

Parasuram H et al. (2016). Computational Modeling of Single Neuron Extracellular Electric Potentials and Network Local Field Potentials using LFPsim. Frontiers in computational neuroscience. 10 [PubMed]

Parekh R, Ascoli GA. (2013). Neuronal morphology goes digital: a research hub for cellular and system neuroscience. Neuron. 77 [PubMed]

Pelot NA et al. (2021). Excitation Properties of Computational Models of Unmyelinated Peripheral Axons Journal of neurophysiology. 125 [PubMed]

Perreault MC, Raastad M. (2006). Contribution of morphology and membrane resistance to integration of fast synaptic signals in two thalamic cell types. The Journal of physiology. 577 [PubMed]

Petroccione MA et al. (2023). Neuronal glutamate transporters control reciprocal inhibition and gain modulation in D1 medium spiny neurons. eLife. 12 [PubMed]

Poirazi P, Brannon T, Mel BW. (2003). Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell. Neuron. 37 [PubMed]

Poirazi P, Brannon T, Mel BW. (2003). Pyramidal neuron as two-layer neural network. Neuron. 37 [PubMed]

Poirazi P, Brannon T, Mel BW. (2003). Online Supplement: About the Model Neuron. 37 Online

Poirazi P, Markaki M, Orphanoudakis S. (2005). Modelling reduced excitability in aged CA1 neurons as a calcium-dependent process Neurocomputing. 65-66

Poolos NP, Migliore M, Johnston D. (2002). Pharmacological upregulation of h-channels reduces the excitability of pyramidal neuron dendrites. Nature neuroscience. 5 [PubMed]

Popovic MA, Gao X, Carnevale NT, Zecevic D. (2014). Cortical dendritic spine heads are not electrically isolated by the spine neck from membrane potential signals in parent dendrites. Cerebral cortex (New York, N.Y. : 1991). 24 [PubMed]

Pospischil M, Piwkowska Z, Bal T, Destexhe A. (2009). Extracting synaptic conductances from single membrane potential traces. Neuroscience. 158 [PubMed]

Pospischil M, Piwkowska Z, Rudolph M, Bal T, Destexhe A. (2007). Calculating event-triggered average synaptic conductances from the membrane potential. Journal of neurophysiology. 97 [PubMed]

Pospischil M et al. (2008). Minimal Hodgkin-Huxley type models for different classes of cortical and thalamic neurons. Biological cybernetics. 99 [PubMed]

Postlethwaite M, Hennig MH, Steinert JR, Graham BP, Forsythe ID. (2007). Acceleration of AMPA receptor kinetics underlies temperature-dependent changes in synaptic strength at the rat calyx of Held. The Journal of physiology. 579 [PubMed]

Pouille F, McTavish TS, Hunter LE, Restrepo D, Schoppa NE. (2017). Intraglomerular gap junctions enhance interglomerular synchrony in a sparsely connected olfactory bulb network. The Journal of physiology. 595 [PubMed]

Prescott SA, De Koninck Y. (2005). Integration time in a subset of spinal lamina I neurons is lengthened by sodium and calcium currents acting synergistically to prolong subthreshold depolarization. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Prescott SA, Sejnowski TJ, De Koninck Y. (2006). Reduction of anion reversal potential subverts the inhibitory control of firing rate in spinal lamina I neurons: towards a biophysical basis for neuropathic pain. Molecular pain. 2 [PubMed]

Proddutur A, Yu J, Elgammal FS, Santhakumar V. (2013). Seizure-induced alterations in fast-spiking basket cell GABA currents modulate frequency and coherence of gamma oscillation in network simulations. Chaos (Woodbury, N.Y.). 23 [PubMed]

Publio R, Oliveira RF, Roque AC. (2006). A realistic model of rod photoreceptor for use in a retina network model Neurocomputing. 69

Publio R, Oliveira RF, Roque AC. (2009). A computational study on the role of gap junctions and rod Ih conductance in the enhancement of the dynamic range of the retina. PloS one. 4 [PubMed]

Radecki DZ et al. (2018). Corticohippocampal Dysfunction In The OBiden Mouse Model Of Primary Oligodendrogliopathy. Scientific reports. 8 [PubMed]

Remme MWH, Rinzel J, Schreiber S. (2018). Function and energy consumption constrain neuronal biophysics in a canonical computation: Coincidence detection. PLoS computational biology. 14 [PubMed]

Richert M, Nageswaran JM, Dutt N, Krichmar JL. (2011). An efficient simulation environment for modeling large-scale cortical processing. Frontiers in neuroinformatics. 5 [PubMed]

Rindner DJ, Proddutur A, Lur G. (2022). Cell-type specific integration of feedforward and feedback synaptic inputs in the posterior parietal cortex Neuron. 110 [PubMed]

Roberts PD, Zhang JM, Bell CC, Iancu OD. (2007). Postsynaptic modulation of electrical EPSP size investigated using a compartmental model Neurocomputing. 70

Romani A et al. (2013). Computational modeling of the effects of amyloid-beta on release probability at hippocampal synapses. Frontiers in computational neuroscience. 7 [PubMed]

Ros E, Carrillo R, Ortigosa EM, Barbour B, Agís R. (2006). Event-driven simulation scheme for spiking neural networks using lookup tables to characterize neuronal dynamics. Neural computation. 18 [PubMed]

Roth A, Häusser M. (2001). Compartmental models of rat cerebellar Purkinje cells based on simultaneous somatic and dendritic patch-clamp recordings. The Journal of physiology. 535 [PubMed]

Rothman JS, Silver RA. (2018). NeuroMatic: An Integrated Open-Source Software Toolkit for Acquisition, Analysis and Simulation of Electrophysiological Data. Frontiers in neuroinformatics. 12 [PubMed]

Rubin DB, Cleland TA. (2006). Dynamical mechanisms of odor processing in olfactory bulb mitral cells. Journal of neurophysiology. 96 [PubMed]

Rudolph M, Destexhe A. (2001). Do neocortical pyramidal neurons display stochastic resonance? Journal of computational neuroscience. 11 [PubMed]

Rudolph M, Destexhe A. (2003). The discharge variability of neocortical neurons during high-conductance states. Neuroscience. 119 [PubMed]

Rudolph M, Destexhe A. (2003). Tuning neocortical pyramidal neurons between integrators and coincidence detectors. Journal of computational neuroscience. 14 [PubMed]

Rudolph M, Destexhe A. (2003). A fast-conducting, stochastic integrative mode for neocortical neurons in vivo. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Rudolph M, Destexhe A. (2003). Characterization of subthreshold voltage fluctuations in neuronal membranes. Neural computation. 15 [PubMed]

Rudolph M, Destexhe A. (2004). Inferring network activity from synaptic noise. Journal of physiology, Paris. 98 [PubMed]

Rudolph M, Destexhe A. (2005). An extended analytic expression for the membrane potential distribution of conductance-based synaptic noise. Neural computation. 17 [PubMed]

Rudolph M, Destexhe A. (2006). Analytical integrate-and-fire neuron models with conductance-based dynamics for event-driven simulation strategies. Neural computation. 18 [PubMed]

Rudolph M, Destexhe A. (2006). Event-based simulation strategy for conductance-based synaptic interactions and plasticity Neurocomputing. 69

Rudolph M, Destexhe A. (2006). On the use of analytical expressions for the voltage distribution to analyze intracellular recordings. Neural computation. 18 [PubMed]

Rudolph M, Pospischil M, Timofeev I, Destexhe A. (2007). Inhibition determines membrane potential dynamics and controls action potential generation in awake and sleeping cat cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]

Rumsey CC, Abbott LF. (2004). Synaptic equalization by anti-STDP Journal of neurophysiology. 91 [PubMed]

Rumsey CC, Abbott LF. (2004). Equalization of synaptic efficacy by activity- and timing-dependent synaptic plasticity. Journal of neurophysiology. 91 [PubMed]

Safronov BV, Wolff M, Vogel W. (2000). Excitability of the soma in central nervous system neurons. Biophysical journal. 78 [PubMed]

Saghatelyan A et al. (2005). Activity-dependent adjustments of the inhibitory network in the olfactory bulb following early postnatal deprivation. Neuron. 46 [PubMed]

Sangrey TD, Friesen WO, Levy WB. (2004). Analysis of the optimal channel density of the squid giant axon using a reparameterized Hodgkin-Huxley model. Journal of neurophysiology. 91 [PubMed]

Santamaria F, Teka W, Stockton D. (2016). Power-law dynamics of membrane conductances increase spiking diversity in a Hodgkin-Huxley model PLoS Comput Biol. 12(3)

Santhakumar V, Aradi I, Soltesz I. (2005). Role of mossy fiber sprouting and mossy cell loss in hyperexcitability: a network model of the dentate gyrus incorporating cell types and axonal topography. Journal of neurophysiology. 93 [PubMed]

Saraga F, Ng L, Skinner FK. (2006). Distal gap junctions and active dendrites can tune network dynamics. Journal of neurophysiology. 95 [PubMed]

Saraga F, Skinner FK. (2002). Dynamics and diversity in interneurons: a model exploration with slowly inactivating potassium currents. Neuroscience. 113 [PubMed]

Saraga F, Skinner FK. (2004). Location, location, location (and density) of gap junctions in multi-compartment models. Neurocomputing. 58-60

Saraga F, Wu CP, Zhang L, Skinner FK. (2003). Active dendrites and spike propagation in multi-compartment models of oriens-lacunosum/moleculare hippocampal interneurons. The Journal of physiology. 552 [PubMed]

Saraga F, Zhang XL, Zhang L, Carlen PL, Skinner FK. (2006). Exploring gap junction location and density in electrically coupled hippocampal oriens interneurons Neurocomputing. 69

Saudargiene A, Cobb S, Graham BP. (2015). A computational study on plasticity during theta cycles at Schaffer collateral synapses on CA1 pyramidal cells in the hippocampus. Hippocampus. 25 [PubMed]

Schaefer AT, Helmstaedter M, Sakmann B, Korngreen A. (2003). Correction of conductance measurements in non-space-clamped structures: 1. Voltage-gated K+ channels. Biophysical journal. 84 [PubMed]

Schaefer AT et al. (2007). Dendritic voltage-gated K+ conductance gradient in pyramidal neurones of neocortical layer 5B from rats. The Journal of physiology. 579 [PubMed]

Schaefer AT, Larkum ME, Sakmann B, Roth A. (2003). Coincidence detection in pyramidal neurons is tuned by their dendritic branching pattern. Journal of neurophysiology. 89 [PubMed]

Schiller J, Major G, Koester HJ, Schiller Y. (2000). NMDA spikes in basal dendrites of cortical pyramidal neurons. Nature. 404 [PubMed]

Schoppa NE, Westbrook GL. (2002). AMPA autoreceptors drive correlated spiking in olfactory bulb glomeruli. Nature neuroscience. 5 [PubMed]

Schulz JM, Knoflach F, Hernandez MC, Bischofberger J. (2018). Dendrite-targeting interneurons control synaptic NMDA-receptor activation via nonlinear a5-GABAA receptors. Nature communications. 9 [PubMed]

Scorcioni R, Lazarewicz MT, Ascoli GA. (2004). Quantitative morphometry of hippocampal pyramidal cells: differences between anatomical classes and reconstructing laboratories. The Journal of comparative neurology. 473 [PubMed]

Segev I, London M. (2000). Untangling dendrites with quantitative models. Science (New York, N.Y.). 290 [PubMed]

Sejnowski TJ, Bartol TM, Franks KM. (2001). An MCell model of calcium dynamics and frequency-dependence of calmodulin activation in dendritic spines Neurocomputing. 38

Sejnowski TJ, Steriade M, Timofeev I, Houweling AR, Bazhenov M. (1999). Cortical and thalamic components of augmenting responses: A modeling study Neurocomputing. 26-27

Shah MM, Migliore M, Brown DA. (2011). Differential effects of Kv7 (M-) channels on synaptic integration in distinct subcellular compartments of rat hippocampal pyramidal neurons. The Journal of physiology. 589 [PubMed]

Shao J, Tsao TH, Butera R. (2006). Bursting without slow kinetics: a role for a small world? Neural computation. 18 [PubMed]

Shao LR, Halvorsrud R, Borg-Graham L, Storm JF. (1999). The role of BK-type Ca2+-dependent K+ channels in spike broadening during repetitive firing in rat hippocampal pyramidal cells. The Journal of physiology. 521 Pt 1 [PubMed]

Shen GY, Chen WR, Midtgaard J, Shepherd GM, Hines ML. (1999). Computational analysis of action potential initiation in mitral cell soma and dendrites based on dual patch recordings. Journal of neurophysiology. 82 [PubMed]

Shen W, Hernandez-Lopez S, Tkatch T, Held JE, Surmeier DJ. (2004). Kv1.2-containing K+ channels regulate subthreshold excitability of striatal medium spiny neurons. Journal of neurophysiology. 91 [PubMed]

Sherfey JS et al. (2018). DynaSim: A MATLAB Toolbox for Neural Modeling and Simulation. Frontiers in neuroinformatics. 12 [PubMed]

Shimazaki R et al. (2006). Electrophysiological properties and modeling of murine vomeronasal sensory neurons in acute slice preparations. Chemical senses. 31 [PubMed]

Shu Y, Duque A, Yu Y, Haider B, McCormick DA. (2007). Properties of action-potential initiation in neocortical pyramidal cells: evidence from whole cell axon recordings. Journal of neurophysiology. 97 [PubMed]

Shuman T et al. (2020). Breakdown of spatial coding and interneuron synchronization in epileptic mice. Nature neuroscience. 23 [PubMed]

Sidiropoulou K, Poirazi P. (2012). Predictive features of persistent activity emergence in regular spiking and intrinsic bursting model neurons. PLoS computational biology. 8 [PubMed]

Sikora MA, Gottesman J, Miller RF. (2005). A computational model of the ribbon synapse. Journal of neuroscience methods. 145 [PubMed]

Simon JZ, Carr CE, Shamma SA. (1999). A Dendritic Model of Coincidence Detection in the Avian Brainstem. Neurocomputing. 26-27

Singer W, Stiefel KM, Wespatat V, Tennigkeit F. (2001). A computational model of the interaction of membrane potential oscillations with inhibitory synaptic input in cortical cells Neurocomputing. 38

Siu D. (2004). Activity-dependent hepatocyte growth factor expression and its role in organogenesis and cancer growth suppression. Medical hypotheses. 63 [PubMed]

Skinner FK, Saraga F. (2003). Spike initiation in a hippocampal interneuron model Neurocomputing. 52-4

Sohal VS, Cox CL, Huguenard JR. (1998). Localization of CCK receptors in thalamic reticular neurons: a modeling study. Journal of neurophysiology. 79 [PubMed]

Sohal VS, Huguenard JR. (1998). Long-range connections synchronize rather than spread intrathalamic oscillations: computational modeling and in vitro electrophysiology. Journal of neurophysiology. 80 [PubMed]

Sohal VS, Huguenard JR. (2003). Inhibitory interconnections control burst pattern and emergent network synchrony in reticular thalamus. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Sohal VS, Huguenard JR. (2005). Inhibitory coupling specifically generates emergent gamma oscillations in diverse cell types. Proceedings of the National Academy of Sciences of the United States of America. 102 [PubMed]

Sohal VS, Huntsman MM, Huguenard JR. (2000). Reciprocal inhibitory connections regulate the spatiotemporal properties of intrathalamic oscillations. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

Somjen GG. (2001). Mechanisms of spreading depression and hypoxic spreading depression-like depolarization. Physiological reviews. 81 [PubMed]

Somjen GG, Kager H, Wadman WJ. (2009). Calcium sensitive non-selective cation current promotes seizure-like discharges and spreading depression in a model neuron. Journal of computational neuroscience. 26 [PubMed]

Song D, Wang Z, Berger TW. (2002). Contribution of T-type VDCC to TEA-induced long-term synaptic modification in hippocampal CA1 and dentate gyrus. Hippocampus. 12 [PubMed]

Song W et al. (2012). The human Nav1.5 F1486 deletion associated with long QT syndrome leads to impaired sodium channel inactivation and reduced lidocaine sensitivity. The Journal of physiology. 590 [PubMed]

Sousa M, Szucs P, Lima D, Aguiar P. (2014). The pronociceptive dorsal reticular nucleus contains mostly tonic neurons and shows a high prevalence of spontaneous activity in block preparation. Journal of neurophysiology. 111 [PubMed]

Spiga S, Lintas A, Migliore M, Diana M. (2010). Altered architecture and functional consequences of the mesolimbic dopamine system in cannabis dependence. Addiction biology. 15 [PubMed]

Spirou GA, Rager J, Manis PB. (2005). Convergence of auditory-nerve fiber projections onto globular bushy cells. Neuroscience. 136 [PubMed]

Stacey WC, Krieger A, Litt B. (2011). Network recruitment to coherent oscillations in a hippocampal computer model. Journal of neurophysiology. 105 [PubMed]

Stacey WC, Lazarewicz MT, Litt B. (2009). Synaptic noise and physiological coupling generate high-frequency oscillations in a hippocampal computational model. Journal of neurophysiology. 102 [PubMed]

Steephen JE, Manchanda R. (2009). Differences in biophysical properties of nucleus accumbens medium spiny neurons emerging from inactivation of inward rectifying potassium currents. Journal of computational neuroscience. 27 [PubMed]

Steinmetz PN, Manwani A, Koch C, London M, Segev I. (2000). Subthreshold voltage noise due to channel fluctuations in active neuronal membranes. Journal of computational neuroscience. 9 [PubMed]

Sterratt DC, Graham B, Gillies A, Willshaw D. (2011). Principles of Computational Modelling in Neuroscience, Cambridge University Press.

Sterratt DC, Groen MR, Meredith RM, van Ooyen A. (2012). Spine calcium transients induced by synaptically-evoked action potentials can predict synapse location and establish synaptic democracy. PLoS computational biology. 8 [PubMed]

. (2004). Does a dendritic democracy need a ruler? Neurocomputing. 58

Steuber V, Jaeger D. (2013). Modeling the generation of output by the cerebellar nuclei. Neural networks : the official journal of the International Neural Network Society. 47 [PubMed]

Stiefel KM, Gutkin BS, Sejnowski TJ. (2009). The effects of cholinergic neuromodulation on neuronal phase-response curves of modeled cortical neurons. Journal of computational neuroscience. 26 [PubMed]

Stiefel KM, Sejnowski TJ. (2007). Mapping function onto neuronal morphology. Journal of neurophysiology. 98 [PubMed]

Stuart G, Spruston N. (1998). Determinants of voltage attenuation in neocortical pyramidal neuron dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Stuart GJ, Häusser M. (2001). Dendritic coincidence detection of EPSPs and action potentials. Nature neuroscience. 4 [PubMed]

Sun Q, Srinivas KV, Sotayo A, Siegelbaum SA. (2014). Dendritic Na+ spikes enable cortical input to drive action potential output from hippocampal CA2 pyramidal neurons. eLife. 3 [PubMed]

Sundt D, Gamper N, Jaffe DB. (2015). Spike propagation through the dorsal root ganglia in an unmyelinated sensory neuron: a modeling study. Journal of neurophysiology. 114 [PubMed]

Susi G et al. (2021). FNS allows efficient event-driven spiking neural network simulations based on a neuron model supporting spike latency Scientific reports. 11 [PubMed]

Takagi H, Kawasaki M. (2003). Modeling of time disparity detection by the Hodgkin-Huxley equations. Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology. 189 [PubMed]

Tejada J, Arisi GM, García-Cairasco N, Roque AC. (2012). Morphological alterations in newly born dentate gyrus granule cells that emerge after status epilepticus contribute to make them less excitable. PloS one. 7 [PubMed]

Telenczuk M, Fontaine B, Brette R. (2017). The basis of sharp spike onset in standard biophysical models. PloS one. 12 [PubMed]

Teleńczuk M, Brette R, Destexhe A, Teleńczuk B. (2018). Contribution of the Axon Initial Segment to Action Potentials Recorded Extracellularly. eNeuro. 5 [PubMed]

Thomson AM, Destexhe A. (1999). Dual intracellular recordings and computational models of slow inhibitory postsynaptic potentials in rat neocortical and hippocampal slices. Neuroscience. 92 [PubMed]

Tiesinga PH, Fellous JM, José JV, Sejnowski TJ. (2001). Computational model of carbachol-induced delta, theta, and gamma oscillations in the hippocampus. Hippocampus. 11 [PubMed]

Tikidji-Hamburyan RA, Canavier CC. (2020). Shunting Inhibition Improves Synchronization in Heterogeneous Inhibitory Interneuronal Networks with Type 1 Excitability Whereas Hyperpolarizing Inhibition is Better for Type 2 Excitability. eNeuro. 7 [PubMed]

Tikidji-Hamburyan RA, El-Ghazawi TA, Narayana V, Bozkus Z. (2017). Software for Brain Network Simulations: A Comparative Study Front. Neuroinform..

Tikidji-Hamburyan RA, Leonik CA, Canavier CC. (2019). Phase response theory explains cluster formation in sparsely but strongly connected inhibitory neural networks and effects of jitter due to sparse connectivity. Journal of neurophysiology. 121 [PubMed]

Tikidji-Hamburyan RA, Martínez JJ, White JA, Canavier CC. (2015). Resonant Interneurons Can Increase Robustness of Gamma Oscillations. The Journal of neuroscience : the official journal of the Society for Neuroscience. 35 [PubMed]

Tomko M, Benuskova L, Jedlicka P. (2021). A new reduced-morphology model for CA1 pyramidal cells and its validation and comparison with other models using HippoUnit. Scientific reports. 11 [PubMed]

Tomsett RJ et al. (2015). Virtual Electrode Recording Tool for EXtracellular potentials (VERTEX): comparing multi-electrode recordings from simulated and biological mammalian cortical tissue. Brain structure & function. 220 [PubMed]

Tort AB, Rotstein HG, Dugladze T, Gloveli T, Kopell NJ. (2007). On the formation of gamma-coherent cell assemblies by oriens lacunosum-moleculare interneurons in the hippocampus. Proceedings of the National Academy of Sciences of the United States of America. 104 [PubMed]

Traboulsie A, Chemin J, Kupfer E, Nargeot J, Lory P. (2006). T-type calcium channels are inhibited by fluoxetine and its metabolite norfluoxetine. Molecular pharmacology. 69 [PubMed]

Tsai D, Morley JW, Suaning GJ, Lovell NH. (2017). Survey of electrically evoked responses in the retina - stimulus preferences and oscillation among neurons. Scientific reports. 7 [PubMed]

Tsay D, Yuste R. (2002). Role of dendritic spines in action potential backpropagation: a numerical simulation study. Journal of neurophysiology. 88 [PubMed]

Tzilivaki A, Kastellakis G, Poirazi P. (2019). Challenging the point neuron dogma: FS basket cells as 2-stage nonlinear integrators Nature communications. 10 [PubMed]

Uhlrich DJ, Neymotin S, Manning KA. (2008). Data mining of time-domain features from neural extracellular field data Applic. of Comput. Intel. in Bioinf. and Biomed.: Current Trends and Open Problems. 151

Ujfalussy BB, Makara JK, Lengyel M, Branco T. (2018). Global and Multiplexed Dendritic Computations under In Vivo-like Conditions. Neuron. 100 [PubMed]

Urakubo H, Aihara T, Kuroda S, Watanabe M, Kondo S. (2004). Spatial localization of synapses required for supralinear summation of action potentials and EPSPs. Journal of computational neuroscience. 16 [PubMed]

Vabnick I et al. (1999). Dynamic potassium channel distributions during axonal development prevent aberrant firing patterns. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

Vetter P, Roth A, Häusser M. (2001). Propagation of action potentials in dendrites depends on dendritic morphology. Journal of neurophysiology. 85 [PubMed]

Vida I, Bartos M, Jonas P. (2006). Shunting inhibition improves robustness of gamma oscillations in hippocampal interneuron networks by homogenizing firing rates. Neuron. 49 [PubMed]

Wang J, Chen S, Nolan MF, Siegelbaum SA. (2002). Activity-dependent regulation of HCN pacemaker channels by cyclic AMP: signaling through dynamic allosteric coupling. Neuron. 36 [PubMed]

Wang XD, Hao J, Poo MM , Zhang XH. (2006). How does a neuron perform subtraction? - Arithmetic rules of synaptic integration of excitation and inhibition Advances in Neural Networks-ISNN 2006. 3971

Wang Z, Song D, Berger TW. (2002). Contribution of NMDA receptor channels to the expression of LTP in the hippocampal dentate gyrus. Hippocampus. 12 [PubMed]

Warashina A. (2006). Mode of mitochondrial Ca2+ clearance and its influence on secretory responses in stimulated chromaffin cells. Cell calcium. 39 [PubMed]

Warashina A, Ogura T. (2004). Modeling of stimulation-secretion coupling in a chromaffin cell. Pflugers Archiv : European journal of physiology. 448 [PubMed]

Watanabe S, Hoffman DA, Migliore M, Johnston D. (2002). Dendritic K+ channels contribute to spike-timing dependent long-term potentiation in hippocampal pyramidal neurons. Proceedings of the National Academy of Sciences of the United States of America. 99 [PubMed]

Weaver CM, Wearne SL. (2006). The role of action potential shape and parameter constraints in optimization of compartment models Neurocomputing. 69

Wenning G, Obermayer K. (2003). Activity driven adaptive stochastic resonance. Physical review letters. 90 [PubMed]

Westover MB, Fischer BJ. (2003). The neural multiple access channel. Neurocomputing. 52-54

Wetmore DZ, Mukamel EA, Schnitzer MJ. (2008). Lock-and-key mechanisms of cerebellar memory recall based on rebound currents. Journal of neurophysiology. 100 [PubMed]

Williams SR, Stuart GJ. (2003). Role of dendritic synapse location in the control of action potential output. Trends in neurosciences. 26 [PubMed]

Wilmes KA, Sprekeler H, Schreiber S. (2016). Inhibition as a Binary Switch for Excitatory Plasticity in Pyramidal Neurons. PLoS computational biology. 12 [PubMed]

Winters BD, Jin SX, Ledford KR, Golding NL. (2017). Amplitude Normalization of Dendritic EPSPs at the Soma of Binaural Coincidence Detector Neurons of the Medial Superior Olive. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37 [PubMed]

Wissmann R et al. (2003). Solution structure and function of the "tandem inactivation domain" of the neuronal A-type potassium channel Kv1.4. The Journal of biological chemistry. 278 [PubMed]

Wolf JA et al. (2005). NMDA/AMPA ratio impacts state transitions and entrainment to oscillations in a computational model of the nucleus accumbens medium spiny projection neuron. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Wolfart J, Debay D, Le Masson G, Destexhe A, Bal T. (2005). Synaptic background activity controls spike transfer from thalamus to cortex. Nature neuroscience. 8 [PubMed]

Wong AY, Graham BP, Billups B, Forsythe ID. (2003). Distinguishing between presynaptic and postsynaptic mechanisms of short-term depression during action potential trains. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Wu SN. (2004). Simulations of the cardiac action potential based on the Hodgkin-Huxley kinetics with the use of Microsoft Excel spreadsheets. The Chinese journal of physiology. 47 [PubMed]

Xiang Z, Huguenard JR, Prince DA. (2002). Synaptic inhibition of pyramidal cells evoked by different interneuronal subtypes in layer v of rat visual cortex. Journal of neurophysiology. 88 [PubMed]

Yamasaki T, Isokawa T, Matsui N, Ikeno H, Kanzaki R. (2006). Reconstruction and simulation for three-dimensional morphological structure of insect neurons Neurocomputing. 69

Yang GR, Murray JD, Wang XJ. (2016). A dendritic disinhibitory circuit mechanism for pathway-specific gating. Nature communications. 7 [PubMed]

Yim MY, Hanuschkin A, Wolfart J. (2015). Intrinsic rescaling of granule cells restores pattern separation ability of a dentate gyrus network model during epileptic hyperexcitability. Hippocampus. 25 [PubMed]

Yin N, Yang H, Yao W, Ding G. (2017). A mathematical model of histamine-mediated neural activation during acupuncture. Biomechanics and modeling in mechanobiology. 16 [PubMed]

Yousif NAB, Denham M. (2004). Action potential backpropagation in a model thalamocortical relay cell Neurocomputing. 58-60

Yu J, Proddutur A, Elgammal FS, Ito T, Santhakumar V. (2013). Status epilepticus enhances tonic GABA currents and depolarizes GABA reversal potential in dentate fast-spiking basket cells. Journal of neurophysiology. 109 [PubMed]

Yu Y et al. (2013). Sparse distributed representation of odors in a large-scale olfactory bulb circuit. PLoS computational biology. 9 [PubMed]

Yu Y, Migliore M, Hines ML, Shepherd GM. (2014). Sparse coding and lateral inhibition arising from balanced and unbalanced dendrodendritic excitation and inhibition. The Journal of neuroscience : the official journal of the Society for Neuroscience. 34 [PubMed]

Yu Y, Shu Y, McCormick DA. (2008). Cortical action potential backpropagation explains spike threshold variability and rapid-onset kinetics. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Zang Y, De Schutter E. (2021). The Cellular Electrophysiological Properties Underlying Multiplexed Coding in Purkinje Cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 41 [PubMed]

Zang Y, Dieudonné S, De Schutter E. (2018). Voltage- and Branch-Specific Climbing Fiber Responses in Purkinje Cells Cell reports. 24 [PubMed]

Zang Y, Marder E. (2023). Neuronal morphology enhances robustness to perturbations of channel densities Proceedings of the National Academy of Sciences of the United States of America. 120 [PubMed]

Zhang TC, Janik JJ, Grill WM. (2014). Modeling effects of spinal cord stimulation on wide-dynamic range dorsal horn neurons: influence of stimulation frequency and GABAergic inhibition. Journal of neurophysiology. 112 [PubMed]

Zheng Y et al. (2019). Deep Sequencing of Somatosensory Neurons Reveals Molecular Determinants of Intrinsic Physiological Properties Neuron.

Zhou Y, Carney LH, Colburn HS. (2005). A model for interaural time difference sensitivity in the medial superior olive: interaction of excitatory and inhibitory synaptic inputs, channel dynamics, and cellular morphology. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Zhou Y, Colburn HS. (2010). A modeling study of the effects of membrane afterhyperpolarization on spike interval statistics and on ILD encoding in the lateral superior olive. Journal of neurophysiology. 103 [PubMed]

Zhu JJ, Lytton WW, Xue JT, Uhlrich DJ. (1999). An intrinsic oscillation in interneurons of the rat lateral geniculate nucleus. Journal of neurophysiology. 81 [PubMed]

Zou Q, Bornat Y, Tomas J, Renaud S, Destexhe A. (2006). Real-time simulations of networks of Hodgkin-Huxley neurons using analog circuits Neurocomputing. 69

Zsiros V, Aradi I, Maccaferri G. (2007). Propagation of postsynaptic currents and potentials via gap junctions in GABAergic networks of the rat hippocampus. The Journal of physiology. 578 [PubMed]

Zylbertal A, Kahan A, Ben-Shaul Y, Yarom Y, Wagner S. (2015). Prolonged Intracellular Na+ Dynamics Govern Electrical Activity in Accessory Olfactory Bulb Mitral Cells. PLoS biology. 13 [PubMed]

Zylbertal A, Yarom Y, Wagner S. (2017). Synchronous Infra-Slow Bursting in the Mouse Accessory Olfactory Bulb Emerge from Interplay between Intrinsic Neuronal Dynamics and Network Connectivity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37 [PubMed]

Zylbertal A, Yarom Y, Wagner S. (2017). The Slow Dynamics of Intracellular Sodium Concentration Increase the Time Window of Neuronal Integration: A Simulation Study Frontiers in computational neuroscience. 11 [PubMed]

van Elburg RA, van Ooyen A. (2010). Impact of dendritic size and dendritic topology on burst firing in pyramidal cells. PLoS computational biology. 6 [PubMed]

van Ooyen A, Duijnhouwer J, Remme MW, van Pelt J. (2002). The effect of dendritic topology on firing patterns in model neurons. Network (Bristol, England). 13 [PubMed]

van Welie I, Remme MW, van Hooft JA, Wadman WJ. (2006). Different levels of Ih determine distinct temporal integration in bursting and regular-spiking neurons in rat subiculum. The Journal of physiology. 576 [PubMed]

van der Velden L, van Hooft JA, Chameau P. (2012). Altered dendritic complexity affects firing properties of cortical layer 2/3 pyramidal neurons in mice lacking the 5-HT3A receptor. Journal of neurophysiology. 108 [PubMed]

This website requires cookies and limited processing of your personal data in order to function. By continuing to browse or otherwise use this site, you are agreeing to this use. See our Privacy policy and how to cite and terms of use.