Borg-graham L. (1999). Interpretations of data and mechanisms for hippocampal pyramidal cell models Cerebral Cortex cortical Models. 13

Buzsáki G, Kandel A. (1998). Somadendritic backpropagation of action potentials in cortical pyramidal cells of the awake rat. Journal of neurophysiology. 79 [PubMed]

Buzsáki G, Penttonen M, Nádasdy Z, Bragin A. (1996). Pattern and inhibition-dependent invasion of pyramidal cell dendrites by fast spikes in the hippocampus in vivo. Proceedings of the National Academy of Sciences of the United States of America. 93 [PubMed]

Christie BR, Eliot LS, Ito K, Miyakawa H, Johnston D. (1995). Different Ca2+ channels in soma and dendrites of hippocampal pyramidal neurons mediate spike-induced Ca2+ influx. Journal of neurophysiology. 73 [PubMed]

Colbert CM, Johnston D. (1996). Axonal action-potential initiation and Na+ channel densities in the soma and axon initial segment of subicular pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 16 [PubMed]

Colbert CM, Magee JC, Hoffman DA, Johnston D. (1997). Slow recovery from inactivation of Na+ channels underlies the activity-dependent attenuation of dendritic action potentials in hippocampal CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 17 [PubMed]

Colbert CM, Pan E. (2002). Ion channel properties underlying axonal action potential initiation in pyramidal neurons. Nature neuroscience. 5 [PubMed]

Csicsvari J et al. (2003). Massively parallel recording of unit and local field potentials with silicon-based electrodes. Journal of neurophysiology. 90 [PubMed]

Csicsvari J, Hirase H, Czurkó A, Mamiya A, Buzsáki G. (1999). Oscillatory coupling of hippocampal pyramidal cells and interneurons in the behaving Rat. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

Destexhe A, Paré D. (1999). Impact of network activity on the integrative properties of neocortical pyramidal neurons in vivo. Journal of neurophysiology. 81 [PubMed]

• NN activity impact on neocortical pyr. neurons integrative properties in vivo (Destexhe & Pare 1999) [Model]

Fisher RE, Gray R, Johnston D. (1990). Properties and distribution of single voltage-gated calcium channels in adult hippocampal neurons. Journal of neurophysiology. 64 [PubMed]

Frick A, Magee J, Johnston D. (2004). LTP is accompanied by an enhanced local excitability of pyramidal neuron dendrites. Nature neuroscience. 7 [PubMed]

Frick A, Magee J, Koester HJ, Migliore M, Johnston D. (2003). Normalization of Ca2+ signals by small oblique dendrites of CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Gray CM, Maldonado PE, Wilson M, McNaughton B. (1995). Tetrodes markedly improve the reliability and yield of multiple single-unit isolation from multi-unit recordings in cat striate cortex. Journal of neuroscience methods. 63 [PubMed]

Gulyás AI, Megías M, Emri Z, Freund TF. (1999). Total number and ratio of excitatory and inhibitory synapses converging onto single interneurons of different types in the CA1 area of the rat hippocampus. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

Halliwell JV, Adams PR. (1982). Voltage-clamp analysis of muscarinic excitation in hippocampal neurons. Brain research. 250 [PubMed]

Harris KM, Stevens JK. (1989). Dendritic spines of CA 1 pyramidal cells in the rat hippocampus: serial electron microscopy with reference to their biophysical characteristics. The Journal of neuroscience : the official journal of the Society for Neuroscience. 9 [PubMed]

Henze DA et al. (2000). Intracellular features predicted by extracellular recordings in the hippocampus in vivo. Journal of neurophysiology. 84 [PubMed]

Henze DA, Buzsáki G. (2001). Action potential threshold of hippocampal pyramidal cells in vivo is increased by recent spiking activity. Neuroscience. 105 [PubMed]

Hines ML, Carnevale NT. (1997). The NEURON simulation environment. Neural computation. 9 [PubMed]

Hines ML, Carnevale NT. (2000). Expanding NEURON's repertoire of mechanisms with NMODL. Neural computation. 12 [PubMed]

Hines ML, Carnevale NT. (2001). NEURON: a tool for neuroscientists. The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry. 7 [PubMed]

• Spatial gridding and temporal accuracy in NEURON (Hines and Carnevale 2001) [Model]

Hoffman DA, Magee JC, Colbert CM, Johnston D. (1997). K+ channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons. Nature. 387 [PubMed]

Holt G. (1998). A Critical Reexamination of Some Assumptions and Implications of Cable Theory in Neurobiology. PhD thesis.

• Extracellular Action Potential Simulations (Gold et al 2007) [Model]

Holt GR, Koch C. (1999). Electrical interactions via the extracellular potential near cell bodies. Journal of computational neuroscience. 6 [PubMed]

• Extracellular Action Potential Simulations (Gold et al 2007) [Model]

Jaffe DB et al. (1994). A model for dendritic Ca2+ accumulation in hippocampal pyramidal neurons based on fluorescence imaging measurements. Journal of neurophysiology. 71 [PubMed]

Kamondi A, Acsády L, Buzsáki G. (1998). Dendritic spikes are enhanced by cooperative network activity in the intact hippocampus. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Klee R, Ficker E, Heinemann U. (1995). Comparison of voltage-dependent potassium currents in rat pyramidal neurons acutely isolated from hippocampal regions CA1 and CA3. Journal of neurophysiology. 74 [PubMed]

Koch C. (1999). Biophysics Of Computation: Information Processing in Single Neurons.

Lancaster B, Nicoll RA. (1987). Properties of two calcium-activated hyperpolarizations in rat hippocampal neurones. The Journal of physiology. 389 [PubMed]

López-Aguado L, Ibarz JM, Herreras O. (2001). Activity-dependent changes of tissue resistivity in the CA1 region in vivo are layer-specific: modulation of evoked potentials. Neuroscience. 108 [PubMed]

Magee JC. (1998). Dendritic hyperpolarization-activated currents modify the integrative properties of hippocampal CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Magee JC, Johnston D. (1995). Characterization of single voltage-gated Na+ and Ca2+ channels in apical dendrites of rat CA1 pyramidal neurons. The Journal of physiology. 487 [PubMed]

Mainen ZF, Joerges J, Huguenard JR, Sejnowski TJ. (1995). A model of spike initiation in neocortical pyramidal neurons. Neuron. 15 [PubMed]

• Spike Initiation in Neocortical Pyramidal Neurons (Mainen et al 1995) [Model]

Major G, Larkman AU, Jonas P, Sakmann B, Jack JJ. (1994). Detailed passive cable models of whole-cell recorded CA3 pyramidal neurons in rat hippocampal slices. The Journal of neuroscience : the official journal of the Society for Neuroscience. 14 [PubMed]

Martina M, Jonas P. (1997). Functional differences in Na+ channel gating between fast-spiking interneurones and principal neurones of rat hippocampus. The Journal of physiology. 505 ( Pt 3) [PubMed]

Martina M, Vida I, Jonas P. (2000). Distal initiation and active propagation of action potentials in interneuron dendrites. Science (New York, N.Y.). 287 [PubMed]

Maxwell JC. (1881). A Treatise on Electricity, Magnetism.

Megías M, Emri Z, Freund TF, Gulyás AI. (2001). Total number and distribution of inhibitory and excitatory synapses on hippocampal CA1 pyramidal cells. Neuroscience. 102 [PubMed]

Moffitt MA, McIntyre CC. (2005). Model-based analysis of cortical recording with silicon microelectrodes. Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. 116 [PubMed]

Mountcastle VB, Talbot WH, Sakata H, Hyvärinen J. (1969). Cortical neuronal mechanisms in flutter-vibration studied in unanesthetized monkeys. Neuronal periodicity and frequency discrimination. Journal of neurophysiology. 32 [PubMed]

Plonsey R. (1969). Bioelectric Phenomena.

Poirazi P, Brannon T, Mel BW. (2003). Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell. Neuron. 37 [PubMed]

• CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Poolos NP, Johnston D. (1999). Calcium-activated potassium conductances contribute to action potential repolarization at the soma but not the dendrites of hippocampal CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

Quirk MC, Blum KI, Wilson MA. (2001). Experience-dependent changes in extracellular spike amplitude may reflect regulation of dendritic action potential back-propagation in rat hippocampal pyramidal cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 21 [PubMed]

Quiroga RQ, Nadasdy Z, Ben-Shaul Y. (2004). Unsupervised spike detection and sorting with wavelets and superparamagnetic clustering. Neural computation. 16 [PubMed]

RALL W. (1962). Electrophysiology of a dendritic neuron model. Biophysical journal. 2 [PubMed]

Rosenfalck P. (1969). Intra- and extracellular potential fields of active nerve and muscle fibres. A physico-mathematical analysis of different models. Acta physiologica Scandinavica. Supplementum. 321 [PubMed]

Segev I, Koch C. (1998). Methods In Neuronal Modeling.

Spruston N, Johnston D. (1992). Perforated patch-clamp analysis of the passive membrane properties of three classes of hippocampal neurons. Journal of neurophysiology. 67 [PubMed]

Storm JF. (1988). Temporal integration by a slowly inactivating K+ current in hippocampal neurons. Nature. 336 [PubMed]

Stuart G, Spruston N. (1998). Determinants of voltage attenuation in neocortical pyramidal neuron dendrites. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

• Pyramidal Neuron Deep: attenuation in dendrites (Stuart, Spruston 1998) [Model]

Toledo-Rodriguez M et al. (2004). Correlation maps allow neuronal electrical properties to be predicted from single-cell gene expression profiles in rat neocortex. Cerebral cortex (New York, N.Y. : 1991). 14 [PubMed]

Trayanova N, Henriquez CS. (1991). Modification of a cylindrical bidomain model for cardiac tissue. Mathematical biosciences. 104 [PubMed]

Tsubokawa H. (2005). Control of Na+ spike backpropagation by intracellular signaling in the pyramidal neuron dendrites. Mol Neurobiol. 22

Weber E. (1950). Electro Magnetic Fields: Theory, Applications.

Williamson A, Alger BE. (1990). Characterization of an early afterhyperpolarization after a brief train of action potentials in rat hippocampal neurons in vitro. Journal of neurophysiology. 63 [PubMed]

Wilson MA, McNaughton BL. (1993). Dynamics of the hippocampal ensemble code for space. Science (New York, N.Y.). 261 [PubMed]

Yoshida A, Oda M, Ikemoto Y. (1991). Kinetics of the Ca(2+)-activated K+ channel in rat hippocampal neurons. The Japanese journal of physiology. 41 [PubMed]

Berzhanskaya J, Chernyy N, Gluckman BJ, Schiff SJ, Ascoli GA. (2013). Modulation of hippocampal rhythms by subthreshold electric fields and network topology. Journal of computational neuroscience. 34 [PubMed]

• Modulation of hippocampal rhythms by electric fields and network topology (Berzhanskaya et al. 2013) [Model]

Camuñas-Mesa LA, Quiroga RQ. (2013). A detailed and fast model of extracellular recordings. Neural computation. 25 [PubMed]

• A detailed and fast model of extracellular recordings (Camunas-Mesa & Qurioga 2013) [Model]

Carnevale NT, Morse TM. (1996). Research reports that have used NEURON Web published citations at the NEURON website.

Cserpán D et al. (2017). Revealing the distribution of transmembrane currents along the dendritic tree of a neuron from extracellular recordings. eLife. 6 [PubMed]

Diwakar S, Lombardo P, Solinas S, Naldi G, D'Angelo E. (2011). Local field potential modeling predicts dense activation in cerebellar granule cells clusters under LTP and LTD control. PloS one. 6 [PubMed]

• Reconstructing cerebellar granule layer evoked LFP using convolution (ReConv) (Diwakar et al. 2011) [Model]

Fink CG, Gliske S, Catoni N, Stacey WC. (2015). Network Mechanisms Generating Abnormal and Normal Hippocampal High-Frequency Oscillations: A Computational Analysis. eNeuro. 2 [PubMed]

• Normal ripples, abnormal ripples, and fast ripples in a hippocampal model (Fink et al. 2015) [Model]

Frey U, Egert U, Heer F, Hafizovic S, Hierlemann A. (2009). Microelectronic system for high-resolution mapping of extracellular electric fields applied to brain slices. Biosensors & bioelectronics. 24 [PubMed]

Giugliano M, Gambazzi L, Ballerini L, Prato M, Campidelli S. (2012). Carbon nanotubes as electrical interfaces to neurons Nanotechnology for Biology and Medicine.

• Carbon nanotubes as electrical interfaces to neurons (Giugliano et al. 2008) [Model]

Gold C, Henze DA, Koch C. (2007). Using extracellular action potential recordings to constrain compartmental models. Journal of computational neuroscience. 23 [PubMed]

• Extracellular Action Potential Simulations (Gold et al 2007) [Model]

Głąbska H, Chintaluri C, Wójcik DK. (2017). Collection of Simulated Data from a Thalamocortical Network Model. Neuroinformatics. 15 [PubMed]

• Collection of simulated data from a thalamocortical network model (Glabska, Chintaluri, Wojcik 2017) [Model]

Huys QJ, Ahrens MB, Paninski L. (2006). Efficient estimation of detailed single-neuron models. Journal of neurophysiology. 96 [PubMed]

• Efficient estimation of detailed single-neuron models (Huys et al. 2006) [Model]

McColgan T et al. (2017). Dipolar extracellular potentials generated by axonal projections. eLife. 6 [PubMed]

• Dipolar extracellular potentials generated by axonal projections (McColgan et al 2017) [Model]

Mechler F, Victor JD. (2012). Dipole characterization of single neurons from their extracellular action potentials. Journal of computational neuroscience. 32 [PubMed]

• Dipole Localization Kit (Mechler & Victor, 2012) [Model]

Mondragón-González SL, Burguière E. (2017). Bio-inspired benchmark generator for extracellular multi-unit recordings. Scientific reports. 7 [PubMed]

Mosher CP et al. (2020). Cellular Classes in the Human Brain Revealed In Vivo by Heartbeat-Related Modulation of the Extracellular Action Potential Waveform. Cell reports. 30 [PubMed]

• Cellular classes revealed by heartbeat-related modulation of extracellular APs (Mosher et al 2020) [Model]

Ness TV, Remme MW, Einevoll GT. (2016). Active subthreshold dendritic conductances shape the local field potential. The Journal of physiology. 594 [PubMed]

Parasuram H et al. (2016). Computational Modeling of Single Neuron Extracellular Electric Potentials and Network Local Field Potentials using LFPsim. Frontiers in computational neuroscience. 10 [PubMed]

• Modeling single neuron LFPs and extracellular potentials with LFPsim (Parasuram et al. 2016) [Model]

Sinha M, Narayanan R. (2015). HCN channels enhance spike phase coherence and regulate the phase of spikes and LFPs in the theta-frequency range. Proceedings of the National Academy of Sciences of the United States of America. 112 [PubMed]

• Subthreshold conductances regulate theta-frequency LFPs and spike phase (Sinha and Narayanan, 2015) [Model]

Sætra MJ, Einevoll GT, Halnes G. (2021). An electrodiffusive neuron-extracellular-glia model for exploring the genesis of slow potentials in the brain PLoS computational biology. 17 [PubMed]

• The electrodiffusive neuron-extracellular-glia (edNEG) model (Sætra et al. 2021) [Model]

Telenczuk M, Fontaine B, Brette R. (2017). The basis of sharp spike onset in standard biophysical models. PloS one. 12 [PubMed]

• The basis of sharp spike onset in standard biophysical models (Telenczuk et al 2017) [Model]

Teleńczuk M, Brette R, Destexhe A, Teleńczuk B. (2018). Contribution of the Axon Initial Segment to Action Potentials Recorded Extracellularly. eNeuro. 5 [PubMed]

• Contribution of the axon initial segment to APs recorded extracellularly (Telenczuk et al 2018) [Model]

Van Dijck G et al. (2012). Enhancing the yield of high-density electrode arrays through automated electrode selection. International journal of neural systems. 22 [PubMed]

• 5-neuron-model of neocortex for producing realistic extracellular AP shapes (Van Dijck et al. 2012) [Model]

Wang K, Riera J, Enjieu-Kadji H, Kawashima R. (2013). The role of extracellular conductivity profiles in compartmental models for neurons: particulars for layer 5 pyramidal cells. Neural computation. 25 [PubMed]

• Modeling conductivity profiles in the deep neocortical pyramidal neuron (Wang K et al. 2013) [Model]

Xu J, Clancy CE. (2008). Ionic mechanisms of endogenous bursting in CA3 hippocampal pyramidal neurons: a model study. PloS one. 3 [PubMed]

• Ionic mechanisms of bursting in CA3 pyramidal neurons (Xu and Clancy 2008) [Model]