Acsády L, Kamondi A, Sík A, Freund T, Buzsáki G. (1998). GABAergic cells are the major postsynaptic targets of mossy fibers in the rat hippocampus. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Alle H, Geiger JR. (2006). Combined analog and action potential coding in hippocampal mossy fibers. Science (New York, N.Y.). 311 [PubMed]

Attwell D, Iadecola C. (2002). The neural basis of functional brain imaging signals. Trends in neurosciences. 25 [PubMed]

Attwell D, Laughlin SB. (2001). An energy budget for signaling in the grey matter of the brain. Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. 21 [PubMed]

Bean BP. (2007). The action potential in mammalian central neurons. Nature reviews. Neuroscience. 8 [PubMed]

Bischofberger J, Geiger JR, Jonas P. (2002). Timing and efficacy of Ca2+ channel activation in hippocampal mossy fiber boutons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

Braitenberg V, Schuz A. (1998). Cortex Statistics and Geometry of Neuronal Connectivity 2nd ed.

Claiborne BJ, Amaral DG, Cowan WM. (1990). Quantitative, three-dimensional analysis of granule cell dendrites in the rat dentate gyrus. The Journal of comparative neurology. 302 [PubMed]

Engel D, Jonas P. (2005). Presynaptic action potential amplification by voltage-gated Na+ channels in hippocampal mossy fiber boutons. Neuron. 45 [PubMed]

Faisal AA, Laughlin SB. (2007). Stochastic simulations on the reliability of action potential propagation in thin axons. PLoS computational biology. 3 [PubMed]

Geiger JR, Jonas P. (2000). Dynamic control of presynaptic Ca(2+) inflow by fast-inactivating K(+) channels in hippocampal mossy fiber boutons. Neuron. 28 [PubMed]

Geiger JR, Lübke J, Roth A, Frotscher M, Jonas P. (1997). Submillisecond AMPA receptor-mediated signaling at a principal neuron-interneuron synapse. Neuron. 18 [PubMed]

• Fast AMPA receptor signaling (Geiger et al 1997) [Model]

HODGKIN AL, HUXLEY AF. (1952). A quantitative description of membrane current and its application to conduction and excitation in nerve. The Journal of physiology. 117 [PubMed]

• Squid axon (Hodgkin, Huxley 1952) (NEURON) [Model]
• Squid axon (Hodgkin, Huxley 1952) (SNNAP) [Model]
• Squid axon (Hodgkin, Huxley 1952) (LabAXON) [Model]
• Squid axon (Hodgkin, Huxley 1952) (SBML, XPP, other) [Model]
• Squid axon (Hodgkin, Huxley 1952) used in (Chen et al 2010) (R language) [Model]

Henze DA, Wittner L, Buzsáki G. (2002). Single granule cells reliably discharge targets in the hippocampal CA3 network in vivo. Nature neuroscience. 5 [PubMed]

Hines ML, Carnevale NT. (1997). The NEURON simulation environment. Neural computation. 9 [PubMed]

Hodgkin A. (1975). The optimum density of sodium channels in an unmyelinated nerve. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 270 [PubMed]

Jung MW, McNaughton BL. (1993). Spatial selectivity of unit activity in the hippocampal granular layer. Hippocampus. 3 [PubMed]

Kole MH, Letzkus JJ, Stuart GJ. (2007). Axon initial segment Kv1 channels control axonal action potential waveform and synaptic efficacy. Neuron. 55 [PubMed]

Kress GJ, Dowling MJ, Meeks JP, Mennerick S. (2008). High threshold, proximal initiation, and slow conduction velocity of action potentials in dentate granule neuron mossy fibers. Journal of neurophysiology. 100 [PubMed]

Landowne D, Ritchie JM. (1970). The binding of tritiated ouabain to mammalian non-myelinated nerve fibres. The Journal of physiology. 207 [PubMed]

Laughlin SB, Sejnowski TJ. (2003). Communication in neuronal networks. Science (New York, N.Y.). 301 [PubMed]

Lennie P. (2003). The cost of cortical computation. Current biology : CB. 13 [PubMed]

Logothetis NK. (2008). What we can do and what we cannot do with fMRI. Nature. 453 [PubMed]

Lüpfert C et al. (2001). Rate limitation of the Na(+),K(+)-ATPase pump cycle. Biophysical journal. 81 [PubMed]

Mangia S et al. (2009). Metabolic and hemodynamic events after changes in neuronal activity: current hypotheses, theoretical predictions and in vivo NMR experimental findings. Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. 29 [PubMed]

Martin DW, Sachs JR. (1999). Preparation of Na+,K+-ATPase with near maximal specific activity and phosphorylation capacity: evidence that the reaction mechanism involves all of the sites. Biochemistry. 38 [PubMed]

Mukamel R et al. (2005). Coupling between neuronal firing, field potentials, and FMRI in human auditory cortex. Science (New York, N.Y.). 309 [PubMed]

Nawroth JC, Greer CA, Chen WR, Laughlin SB, Shepherd GM. (2007). An energy budget for the olfactory glomerulus. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]

Niessing J et al. (2005). Hemodynamic signals correlate tightly with synchronized gamma oscillations. Science (New York, N.Y.). 309 [PubMed]

Ritchie JM. (1973). Energetic aspects of nerve conduction: the relationships between heat production, electrical activity and metabolism. Progress in biophysics and molecular biology. 26 [PubMed]

Ritchie JM, Straub RW. (1975). The movement of potassium ions during electrical activity, and the kinetics of the recovery process, in the non-myelinated fibres of the garfish olfactory nerve. The Journal of physiology. 249 [PubMed]

Rosenthal JJ, Bezanilla F. (2002). A comparison of propagated action potentials from tropical and temperate squid axons: different durations and conduction velocities correlate with ionic conductance levels. The Journal of experimental biology. 205 [PubMed]

Schmidt-Hieber C, Jonas P, Bischofberger J. (2007). Subthreshold dendritic signal processing and coincidence detection in dentate gyrus granule cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 27 [PubMed]

• Dentate gyrus granule cell: subthreshold signal processing (Schmidt-Hieber et al. 2007) [Model]

Schmidt-Hieber C, Jonas P, Bischofberger J. (2008). Action potential initiation and propagation in hippocampal mossy fibre axons. The Journal of physiology. 586 [PubMed]

Stuart GJ, Sakmann B. (1994). Active propagation of somatic action potentials into neocortical pyramidal cell dendrites. Nature. 367 [PubMed]

Wang SS et al. (2008). Functional trade-offs in white matter axonal scaling. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Yu Y, Shu Y, McCormick DA. (2008). Cortical action potential backpropagation explains spike threshold variability and rapid-onset kinetics. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

• AP back-prop. explains threshold variability and rapid rise (McCormick et al. 2007, Yu et al. 2008) [Model]

Brette R. (2013). Sharpness of spike initiation in neurons explained by compartmentalization. PLoS computational biology. 9 [PubMed]

• Sharpness of spike initiation in neurons explained by compartmentalization (Brette 2013) [Model]

Fleidervish IA, Lasser-Ross N, Gutnick MJ, Ross WN. (2010). Na+ imaging reveals little difference in action potential-evoked Na+ influx between axon and soma. Nature neuroscience. 13 [PubMed]

• Action potential-evoked Na+ influx are similar in axon and soma (Fleidervish et al. 2010) [Model]
• Action potential-evoked Na+ influx similar in axon and soma (Fleidervish et al. 2010) (Python) [Model]

Hallermann S, de Kock CP, Stuart GJ, Kole MH. (2012). State and location dependence of action potential metabolic cost in cortical pyramidal neurons. Nature neuroscience. 15 [PubMed]

• State and location dependence of action potential metabolic cost (Hallermann et al., 2012) [Model]

Ju H, Hines ML, Yu Y. (2016). Cable energy function of cortical axons. Scientific reports. 6 [PubMed]

McColgan T et al. (2017). Dipolar extracellular potentials generated by axonal projections. eLife. 6 [PubMed]

• Dipolar extracellular potentials generated by axonal projections (McColgan et al 2017) [Model]

Michalikova M, Remme MW, Kempter R. (2017). Spikelets in Pyramidal Neurons: Action Potentials Initiated in the Axon Initial Segment That Do Not Activate the Soma. PLoS computational biology. 13 [PubMed]

• Spikelet generation and AP initiation in a L5 neocortical pyr neuron (Michalikova et al. 2017) Fig 1 [Model]
• Spikelet generation and AP initiation in a simplified pyr neuron (Michalikova et al. 2017) Fig 3 [Model]

Oláh VJ, Tarcsay G, Brunner J. (2021). Small size of recorded neuronal structures confines the accuracy in direct axonal voltage measurements. eNeuro. 8 [PubMed]

• Realistic amplifier model (Oláh et al. 2021) [Model]

Parekh R, Ascoli GA. (2013). Neuronal morphology goes digital: a research hub for cellular and system neuroscience. Neuron. 77 [PubMed]

• Neuronal morphology goes digital ... (Parekh & Ascoli 2013) [Model]

Platkiewicz J, Brette R. (2010). A threshold equation for action potential initiation. PLoS computational biology. 6 [PubMed]

• A threshold equation for action potential initiation (Platkiewicz & Brette 2010) [Model]

Platkiewicz J, Brette R. (2011). Impact of fast sodium channel inactivation on spike threshold dynamics and synaptic integration. PLoS computational biology. 7 [PubMed]

• Impact of fast Na channel inact. on AP threshold & synaptic integration (Platkiewicz & Brette 2011) [Model]

Remme MWH, Rinzel J, Schreiber S. (2018). Function and energy consumption constrain neuronal biophysics in a canonical computation: Coincidence detection. PLoS computational biology. 14 [PubMed]

• Function and energy constrain neuronal biophysics in coincidence detection (Remme et al 2018) [Model]

Schmidt-Hieber C, Bischofberger J. (2010). Fast sodium channel gating supports localized and efficient axonal action potential initiation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

• Fast sodium channel gating in mossy fiber axons (Schmidt-Hieber et al. 2010) [Model]

Zemel BM et al. (2021). Resurgent Na+ currents promote ultrafast spiking in projection neurons that drive fine motor control Nature communications. 12 [PubMed]

• Resurgent sodium transient current in zebra finch RA (Zemel et al., 2021) [Model]