Akemann W, Lundby A, Mutoh H, Knöpfel T. (2009). Effect of voltage sensitive fluorescent proteins on neuronal excitability. Biophysical journal. 96 [PubMed]

• Effect of voltage sensitive fluorescent proteins on neuronal excitability (Akemann et al. 2009) [Model]

Alle H, Roth A, Geiger JR. (2009). Energy-efficient action potentials in hippocampal mossy fibers. Science (New York, N.Y.). 325 [PubMed]

• Action potential reconstitution from measured current waveforms (Alle et al. 2009) [Model]

Clay JR, Paydarfar D, Forger DB. (2008). A simple modification of the Hodgkin and Huxley equations explains type 3 excitability in squid giant axons. Journal of the Royal Society, Interface. 5 [PubMed]

• Model of Type 3 firing in neurons (Clay et al 2008) [Model]

Fleidervish IA, Lasser-Ross N, Gutnick MJ, Ross WN. (2010). Na+ imaging reveals little difference in action potential-evoked Na+ influx between axon and soma. Nature neuroscience. 13 [PubMed]

• Action potential-evoked Na+ influx are similar in axon and soma (Fleidervish et al. 2010) [Model]
• Action potential-evoked Na+ influx similar in axon and soma (Fleidervish et al. 2010) (Python) [Model]

Gertler TS, Chan CS, Surmeier DJ. (2008). Dichotomous anatomical properties of adult striatal medium spiny neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Gorin M et al. (2016). Interdependent Conductances Drive Infraslow Intrinsic Rhythmogenesis in a Subset of Accessory Olfactory Bulb Projection Neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 36 [PubMed]

• Infraslow intrinsic rhythmogenesis in a subset of AOB projection neurons (Gorin et al 2016) [Model]

Gurkiewicz M, Korngreen A. (2007). A numerical approach to ion channel modelling using whole-cell voltage-clamp recordings and a genetic algorithm. PLoS computational biology. 3 [PubMed]

• Ion channel modeling with whole cell and a genetic algorithm (Gurkiewicz and Korngreen 2007) [Model]

Hendrickson EB, Edgerton JR, Jaeger D. (2011). The capabilities and limitations of conductance-based compartmental neuron models with reduced branched or unbranched morphologies and active dendrites. Journal of computational neuroscience. 30 [PubMed]

• Comparison of full and reduced globus pallidus models (Hendrickson 2010) [Model]

Hsu CL, Zhao X, Milstein AD, Spruston N. (2018). Persistent sodium current mediates the steep voltage dependence of spatial coding in hippocampal pyramidal neurons Neuron. 99

• CA1 pyramidal neuron: Persistent Na current mediates steep synaptic amplification (Hsu et al 2018) [Model]

Jaffe DB, Brenner R. (2018). A computational model for how the fast afterhyperpolarization paradoxically increases gain in regularly firing neurons. Journal of neurophysiology. 119 [PubMed]

• Paradoxical effect of fAHP amplitude on gain in dentate gyrus granule cells (Jaffe & Brenner 2018) [Model]

Kalmbach BE et al. (2018). h-Channels Contribute to Divergent Intrinsic Membrane Properties of Supragranular Pyramidal Neurons in Human versus Mouse Cerebral Cortex. Neuron. 100 [PubMed]

Kuznetsova AY, Huertas MA, Kuznetsov AS, Paladini CA, Canavier CC. (2010). Regulation of firing frequency in a computational model of a midbrain dopaminergic neuron. Journal of computational neuroscience. 28 [PubMed]

• Regulation of firing frequency in a midbrain dopaminergic neuron model (Kuznetsova et al. 2010) [Model]

Lombardo J, Harrington MA. (2016). Nonreciprocal mechanisms in up- and downregulation of spinal motoneuron excitability by modulators of KCNQ/Kv7 channels. Journal of neurophysiology. 116 [PubMed]

• Regulation of motoneuron excitability by KCNQ/Kv7 modulators (Lombardo & Harrington 2016) [Model]

López-Jury L, Meza RC, Brown MTC, Henny P, Canavier CC. (2018). Morphological and Biophysical Determinants of the Intracellular and Extracellular Waveforms in Nigral Dopaminergic Neurons: A Computational Study. The Journal of neuroscience : the official journal of the Society for Neuroscience. 38 [PubMed]

• Determinants of the intracellular and extracellular waveforms in DA neurons (Lopez-Jury et al 2018) [Model]

Mateos-Aparicio P, Murphy R, Storm JF. (2014). Complementary functions of SK and Kv7/M potassium channels in excitability control and synaptic integration in rat hippocampal dentate granule cells. The Journal of physiology. 592 [PubMed]

• Dentate granule cell: mAHP & sAHP; SK & Kv7/M channels (Mateos-Aparicio et al., 2014) [Model]

Meuth SG et al. (2008). TWIK-related acid-sensitive K+ channel 1 (TASK1) and TASK3 critically influence T lymphocyte effector functions. The Journal of biological chemistry. 283 [PubMed]

Ohura S, Kamiya H. (2018). Sodium Channel-Dependent and -Independent Mechanisms Underlying Axonal Afterdepolarization at Mouse Hippocampal Mossy Fibers. eNeuro. 5 [PubMed]

• Evaluation of passive component of propagating AP in mossy fiber axons (Ohura & Kamiya 2018) [Model]

Oláh VJ, Tarcsay G, Brunner J. (2021). Small size of recorded neuronal structures confines the accuracy in direct axonal voltage measurements. eNeuro. 8 [PubMed]

• Realistic amplifier model (Oláh et al. 2021) [Model]

Platkiewicz J, Brette R. (2010). A threshold equation for action potential initiation. PLoS computational biology. 6 [PubMed]

• A threshold equation for action potential initiation (Platkiewicz & Brette 2010) [Model]

Pousinha PA et al. (2019). The Amyloid Precursor Protein C-Terminal Domain Alters CA1 Neuron Firing, Modifying Hippocampus Oscillations and Impairing Spatial Memory Encoding. Cell reports. 29 [PubMed]

• The APP in C-terminal domain alters CA1 neuron firing (Pousinha et al 2019) [Model]

Powers RK, Elbasiouny SM, Rymer WZ, Heckman CJ. (2012). Contribution of intrinsic properties and synaptic inputs to motoneuron discharge patterns: a simulation study. Journal of neurophysiology. 107 [PubMed]

• Simulations of motor unit discharge patterns (Powers et al. 2011) [Model]

Rubin JE, Hayes JA, Mendenhall JL, Del Negro CA. (2009). Calcium-activated nonspecific cation current and synaptic depression promote network-dependent burst oscillations. Proceedings of the National Academy of Sciences of the United States of America. 106 [PubMed]

• Ca2+-activated I_CAN and synaptic depression promotes network-dependent oscil. (Rubin et al. 2009) [Model]

Santamaria F, Teka W, Stockton D. (2016). Power-law dynamics of membrane conductances increase spiking diversity in a Hodgkin-Huxley model PLoS Comput Biol. 12(3)

• Hodgkin–Huxley model with fractional gating (Teka et al. 2016) [Model]

Shah MM, Migliore M, Valencia I, Cooper EC, Brown DA. (2008). Functional significance of axonal Kv7 channels in hippocampal pyramidal neurons. Proceedings of the National Academy of Sciences of the United States of America. 105 [PubMed]

• CA1 pyramidal neuron: functional significance of axonal Kv7 channels (Shah et al. 2008) [Model]

Soudry D, Meir R. (2014). The neuronal response at extended timescales: a linearized spiking input-output relation. Frontiers in computational neuroscience. 8 [PubMed]

• Method for deriving general HH neuron model`s spiking input-output relation (Soudry & Meir 2014) [Model]

Sterratt DC, Graham B, Gillies A, Willshaw D. (2011). Principles of Computational Modelling in Neuroscience, Cambridge University Press.

• Principles of Computational Modelling in Neuroscience (Book) (Sterratt et al. 2011) [Model]

Tekieh T, Sasanpour P, Rafii-Tabar H. (2018). Electrophysiological effects of low frequency electrical radiation on the neural compartment: a theoretical investigation Biomed. Phys. Eng. Express. 4

Xie YF, Yang J, Ratté S, Prescott SA. (2024). Similar excitability through different sodium channels and implications for the analgesic efficacy of selective drugs. eLife. 12 [PubMed]

• Equivalent excitability achieved via different Nav subtypes (Xie et al., 2024) [Model]