Bogacz R, Gurney K. (2007). The basal ganglia and cortex implement optimal decision making between alternative actions. Neural computation. 19 [PubMed]

Cisek P. (2006). Integrated neural processes for defining potential actions and deciding between them: a computational model. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

Fountas Z, Shanahan M. (2017). The role of cortical oscillations in a spiking neural network model of the basal ganglia. PloS one. 12 [PubMed]

• Cortical oscillations and the basal ganglia (Fountas & Shanahan 2017) [Model]

Frank MJ. (2006). Hold your horses: a dynamic computational role for the subthalamic nucleus in decision making. Neural networks : the official journal of the International Neural Network Society. 19 [PubMed]

• Roles of subthalamic nucleus and DBS in reinforcement conflict-based decision making (Frank 2006) [Model]

Gillies A, Willshaw D. (2004). Models of the subthalamic nucleus. The importance of intranuclear connectivity. Medical engineering & physics. 26 [PubMed]

Girard B, Tabareau N, Pham QC, Berthoz A, Slotine JJ. (2008). Where neuroscience and dynamic system theory meet autonomous robotics: a contracting basal ganglia model for action selection. Neural networks : the official journal of the International Neural Network Society. 21 [PubMed]

• A contracting model of the basal ganglia (Girard et al. 2008) [Model]

Gurney K, Prescott TJ, Redgrave P. (2001). A computational model of action selection in the basal ganglia. II. Analysis and simulation of behaviour. Biological cybernetics. 84 [PubMed]

• Population-level model of the basal ganglia and action selection (Gurney et al 2001, 2004) [Model]
• A contracting model of the basal ganglia (Girard et al. 2008) [Model]

Gurney K, Prescott TJ, Redgrave P. (2001). A computational model of action selection in the basal ganglia. I. A new functional anatomy. Biological cybernetics. 84 [PubMed]

• Population-level model of the basal ganglia and action selection (Gurney et al 2001, 2004) [Model]

Gurney KN, Humphries MD, Redgrave P. (2015). A new framework for cortico-striatal plasticity: behavioural theory meets in vitro data at the reinforcement-action interface. PLoS biology. 13 [PubMed]

• Cortico-striatal plasticity in medium spiny neurons (Gurney et al 2015) [Model]

Guthrie M, Leblois A, Garenne A, Boraud T. (2013). Interaction between cognitive and motor cortico-basal ganglia loops during decision making: a computational study. Journal of neurophysiology. 109 [PubMed]

• Cognitive and motor cortico-basal ganglia interactions during decision making (Guthrie et al 2013) [Model]

Humphries MD, Gurney K, Prescott TJ. (2007). Is there a brainstem substrate for action selection? Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 362 [PubMed]

• Medial reticular formation of the brainstem: anatomy and dynamics (Humphries et al. 2006, 2007) [Model]

Humphries MD, Stewart RD, Gurney KN. (2006). A physiologically plausible model of action selection and oscillatory activity in the basal ganglia. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

• Spiking neuron model of the basal ganglia (Humphries et al 2006) [Model]

Humphries MD, Wood R, Gurney K. (2010). Reconstructing the three-dimensional GABAergic microcircuit of the striatum. PLoS computational biology. 6 [PubMed]

• Striatal GABAergic microcircuit, spatial scales of dynamics (Humphries et al, 2010) [Model]

Lindroos R et al. (2018). Basal Ganglia Neuromodulation Over Multiple Temporal and Structural Scales-Simulations of Direct Pathway MSNs Investigate the Fast Onset of Dopaminergic Effects and Predict the Role of Kv4.2. Frontiers in neural circuits. 12 [PubMed]

• Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018) [Model]

Liénard J, Girard B. (2014). A biologically constrained model of the whole basal ganglia addressing the paradoxes of connections and selection. Journal of computational neuroscience. 36 [PubMed]

• Biologically Constrained Basal Ganglia model (BCBG model) (Lienard, Girard 2014) [Model]

Pirini M, Rocchi L, Sensi M, Chiari L. (2009). A computational modelling approach to investigate different targets in deep brain stimulation for Parkinson's disease. Journal of computational neuroscience. 26 [PubMed]

• Investigation of different targets in deep brain stimulation for Parkinson`s (Pirini et al. 2009) [Model]

Prescott TJ, Montes González FM, Gurney K, Humphries MD, Redgrave P. (2006). A robot model of the basal ganglia: behavior and intrinsic processing. Neural networks : the official journal of the International Neural Network Society. 19 [PubMed]

• A contracting model of the basal ganglia (Girard et al. 2008) [Model]

Salimi-Badr A, Ebadzadeh MM, Darlot C. (2017). A possible correlation between the basal ganglia motor function and the inverse kinematics calculation. Journal of computational neuroscience. 43 [PubMed]

• Basal ganglia motor function and the inverse kinematics calculation (Salimi-Badr et al 2017) [Model]

Salimi-Badr A, Ebadzadeh MM, Darlot C. (2018). A system-level mathematical model of Basal Ganglia motor-circuit for kinematic planning of arm movements. Computers in biology and medicine. 92 [PubMed]

• Basal Ganglia motor-circuit for kinematic planning of arm movements (Salimi-Badr et al 2017) [Model]

Shanahan M. (2008). A spiking neuron model of cortical broadcast and competition. Consciousness and cognition. 17 [PubMed]

• A spiking model of cortical broadcast and competition (Shanahan 2008) [Model]

Zhang YH, Ji Y, Zheng WM. (2016). Modelling Spiking Neural Network from the Architecture Evaluation Perspective Journal of Computer Science and Technology. 31