Vesicular pool simulations of synaptic depression (Aristizabal and Glavinovic 2004)


Aristizabal F, Glavinovic MI. (2004). Simulation and parameter estimation of dynamics of synaptic depression. Biological cybernetics. 90 [PubMed]

See more from authors: Aristizabal F · Glavinovic MI

References and models cited by this paper

Aristizabal F, Glavinovica MI. (2001). Identification of changes of dynamic properties of synapses Soc Neurosci Abstr. 31

BROOKS VB, THIES RE. (1962). Reduction of quantum content during neuromuscular transmission. The Journal of physiology. 162 [PubMed]

Bennett MR, Florin T. (1974). A statistical analysis of the release of acetylcholine at newly formed synapses in striated muscle. The Journal of physiology. 238 [PubMed]

Bennett MR, Florin T, Hall R. (1975). The effect of calcium ions on the binomial statistic parameters which control acetylcholine release at synapses in striated muscle. The Journal of physiology. 247 [PubMed]

Betz WJ. (1970). Depression of transmitter release at the neuromuscular junction of the frog. The Journal of physiology. 206 [PubMed]

Birks R, Macintosh FC. (1961). Acetylcholine metabolism of asympathetic ganglion Can J Biochem Physiol. 39

Bittner MA, Holz RW. (1992). Kinetic analysis of secretion from permeabilized adrenal chromaffin cells reveals distinct components. The Journal of biological chemistry. 267 [PubMed]

Bokvist K, Holmqvist M, Gromada J, Rorsman P. (2000). Compound exocytosis in voltage-clamped mouse pancreatic beta-cells revealed by carbon fibre amperometry. Pflugers Archiv : European journal of physiology. 439 [PubMed]

Byrne JH. (1982). Analysis of synaptic depression contributing to habituation of gill-withdrawal reflex in Aplysia californica. Journal of neurophysiology. 48 [PubMed]

Cheek TR, Burgoyne RD. (1986). Nicotine-evoked disassembly of cortical actin filaments in adrenal chromaffin cells. FEBS letters. 207 [PubMed]

Chirilian PM. (1969). Basic network theory.

Christensen BN, Martin AR. (1970). Estimates of probability of transmitter release at the mammalian neuromuscular junction. The Journal of physiology. 210 [PubMed]

Chuhma N, Ohmori H. (1998). Postnatal development of phase-locked high-fidelity synaptic transmission in the medial nucleus of the trapezoid body of the rat. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

DEL CASTILLO J, KATZ B. (1954). Statistical factors involved in neuromuscular facilitation and depression. The Journal of physiology. 124 [PubMed]

Dittman JS, Regehr WG. (1998). Calcium dependence and recovery kinetics of presynaptic depression at the climbing fiber to Purkinje cell synapse. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Doherty P, Hawgood BJ, Smith IC. (1984). Changes in miniature end-plate potentials after brief nervous stimulation at the frog neuromuscular junction. The Journal of physiology. 356 [PubMed]

Gingrich KJ, Byrne JH. (1985). Simulation of synaptic depression, posttetanic potentiation, and presynaptic facilitation of synaptic potentials from sensory neurons mediating gill-withdrawal reflex in Aplysia. Journal of neurophysiology. 53 [PubMed]

Glavinović MI. (1979). Change of statistical parameters of transmitter release during various kinetic tests in unparalysed voltage-clamped rat diaphragm. The Journal of physiology. 290 [PubMed]

Glavinović MI. (1979). Presynaptic action of curare. The Journal of physiology. 290 [PubMed]

Glavinović MI. (1995). Decrease of quantal size and quantal content during tetanic stimulation detected by focal recording. Neuroscience. 69 [PubMed]

Glavinović MI, Narahashi T. (1988). Depression, recovery and facilitation of neuromuscular transmission during prolonged tetanic stimulation. Neuroscience. 25 [PubMed]

Glavinović MI, Trifaró JM. (2002). Change of quantal size and parameters of release with stimulation in bovine chromaffin cells. Pflugers Archiv : European journal of physiology. 443 [PubMed]

Gomis A, Burrone J, Lagnado L. (1999). Two actions of calcium regulate the supply of releasable vesicles at the ribbon synapse of retinal bipolar cells. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]

Gover TD, Jiang XY, Abrams TW. (2002). Persistent, exocytosis-independent silencing of release sites underlies homosynaptic depression at sensory synapses in Aplysia. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

Hatt H, Smith DO. (1976). Synaptic depression related to presynaptic axon conduction block. The Journal of physiology. 259 [PubMed]

Heinemann C, von Rüden L, Chow RH, Neher E. (1993). A two-step model of secretion control in neuroendocrine cells. Pflugers Archiv : European journal of physiology. 424 [PubMed]

Highstein SM, Bennett MV. (1975). Fatigue and recovery of transmission at the Mauthner fiber-giant fiber synapse of the hatchetfish. Brain research. 98 [PubMed]

Hjelmfelt A, Ross J. (1992). Thermodynamic and stochastic theory of electrical circuits. Physical review. A, Atomic, molecular, and optical physics. 45 [PubMed]

Horrigan FT, Brookman R. (1994). Releasable pools and the kinetics of exocytosis in adrenal chromaffin cells Neuron.

Jorge-Rivera JC, Sen K, Birmingham JT, Abbott LF, Marder E. (1998). Temporal dynamics of convergent modulation at a crustacean neuromuscular junction. Journal of neurophysiology. 80 [PubMed]

KRNJEVIC K, MILEDI R. (1958). Failure of neuromuscular propagation in rats. The Journal of physiology. 140 [PubMed]

Katz B, Kuffler SW, Eccles JC. (1941). Nature of the endplate potential in curarized muscle J Physiol. 124

Kelly SS, Robbins N. (1987). Statistics of neuromuscular transmitter release in young and old mouse muscle. The Journal of physiology. 385 [PubMed]

Klein M, Shapiro E, Kandel ER. (1980). Synaptic plasticity and the modulation of the Ca2+ current. The Journal of experimental biology. 89 [PubMed]

Krausz HI, Friesen WO. (1977). The analysis of nonlinear synaptic transmission. The Journal of general physiology. 70 [PubMed]

Kron G. (1944). Equivalent circuit of the field equations of Maxwell Proc IRE. 32

Kron G. (1945). Electric circuit models of the Schrodinger equation Phys Rev E. 67

Kron G. (1945). Electric circuits of compressible and incompressible fluid flow fields J Aeronaut Sci. 12

Kruckenberg P, Sandwig R. (1968). An analog model for acetylcholine release by motor nerve endings. Journal of theoretical biology. 19 [PubMed]

Kusano K, Landau EM. (1975). Depression and recovery of transmission at the squid giant synapse. The Journal of physiology. 245 [PubMed]

LUNDBERG A, QUILISCH H. (1953). Presynaptic potentiation and depression of neuromuscular transmission in frog and rat. Acta physiologica Scandinavica. Supplementum. 111 [PubMed]

Landau EM, Smolinsky A, Lass Y. (1973). Post-tetanic potentiation and facilitation do not share a common calcium-dependent mechanism. Nature: New biology. 244 [PubMed]

Li Y, Branch MA, Coleman TF. (1999). A Subspace, interior, and conjugate gradient method for large-scale bound-constrained minimization problems Siam J Sci Comput. 21

Li Y, Coleman TF. (1996). An interior, trust region approach for nonlinear minimization subject to bounds SIAM J Optim. 6

Li Y, Coleman TF. (1996). A reflective Newton method for minimizing a quadratic function subject to bounds on some of the variables SIAM J Optim. 6

Liley AW, North KAK. (1952). An electrical investigation of effects of repetitive stimulation on mammalian neuromuscular junction J Neurophysiol. 16

Liu G, Tsien RW. (1995). Properties of synaptic transmission at single hippocampal synaptic boutons. Nature. 375 [PubMed]

Maass W, Markram H. (2002). Synapses as dynamic memory buffers. Neural networks : the official journal of the International Neural Network Society. 15 [PubMed]

Maeno T. (1969). Analysis of mobilization and demobilization processes in neuromuscular transmission in the frog. Journal of neurophysiology. 32 [PubMed]

Markram H, Gupta A, Uziel A, Wang Y, Tsodyks M. (1998). Information processing with frequency-dependent synaptic connections. Neurobiology of learning and memory. 70 [PubMed]

Matveev V, Wang XJ. (2000). Implications of all-or-none synaptic transmission and short-term depression beyond vesicle depletion: a computational study. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]

Mikulecky DC. (2001). Network thermodynamics and complexity: a transition to relational systems theory. Computers & chemistry. 25 [PubMed]

Miller RE. (2000). Optimization: foundations and applications.

Mozhayeva MG, Sara Y, Liu X, Kavalali ET. (2002). Development of vesicle pools during maturation of hippocampal synapses. The Journal of neuroscience : the official journal of the Society for Neuroscience. 22 [PubMed]

Neher E, Zucker RS. (1993). Multiple calcium-dependent processes related to secretion in bovine chromaffin cells. Neuron. 10 [PubMed]

Oheim M, Loerke D, Stühmer W, Chow RH. (1999). Multiple stimulation-dependent processes regulate the size of the releasable pool of vesicles. European biophysics journal : EBJ. 28 [PubMed]

Okatan M, Grossberg S. (2000). Frequency-dependent synaptic potentiation, depression and spike timing induced by Hebbian pairing in cortical pyramidal neurons. Neural networks : the official journal of the International Neural Network Society. 13 [PubMed]

Oster GF, Perelson AS, Katchalsky A. (1973). Network thermodynamics: dynamic modelling of biophysical systems. Quarterly reviews of biophysics. 6 [PubMed]

Parsons TD, Coorssen JR, Horstmann H, Almers W. (1995). Docked granules, the exocytic burst, and the need for ATP hydrolysis in endocrine cells. Neuron. 15 [PubMed]

Perrin D, Aunis D. (2006). Reorganization of alpha-fodrin induced by stimulation in secretory cells. Nature. 315

Rawson JA, Tilokskulchai K. (1981). Suppression of simple spike discharges of cerebellar Purkinje cells by impulses in climbing fibre afferents. Neuroscience letters. 25 [PubMed]

Richards DA, Guatimosim C, Betz WJ. (2000). Two endocytic recycling routes selectively fill two vesicle pools in frog motor nerve terminals. Neuron. 27 [PubMed]

Rose D, Bank RE, Coughran WC, Fichtner W, Grosse E. (1985). Transient simulation of silicon devices and circuits IEEE Trans CAD. 4

Schneggenburger R, Meyer AC, Neher E. (1999). Released fraction and total size of a pool of immediately available transmitter quanta at a calyx synapse. Neuron. 23 [PubMed]

Schweizer FE, Betz H, Augustine GJ. (1995). From vesicle docking to endocytosis: intermediate reactions of exocytosis. Neuron. 14 [PubMed]

Sen K, Jorge-Rivera JC, Marder E, Abbott LF. (1996). Decoding synapses. The Journal of neuroscience : the official journal of the Society for Neuroscience. 16 [PubMed]

Shampine LF, Hosea ME. (1996). Analysis and Implementation ofTR-BDF2 Appl Numer Math. 20

Shampine LF, Reichelt MW. (1997). The MATLAB ODE suite Siam J SciComput. 18

Softky WR, Koch C. (1993). The highly irregular firing of cortical cells is inconsistent with temporal integration of random EPSPs. The Journal of neuroscience : the official journal of the Society for Neuroscience. 13 [PubMed]

Stevens CF, Tsujimoto T. (1995). Estimates for the pool size of releasable quanta at a single central synapse and for the time required to refill the pool. Proceedings of the National Academy of Sciences of the United States of America. 92 [PubMed]

Stevens CF, Wesseling JF. (1998). Activity-dependent modulation of the rate at which synaptic vesicles become available to undergo exocytosis. Neuron. 21 [PubMed]

Steyer JA, Horstmann H, Almers W. (1997). Transport, docking and exocytosis of single secretory granules in live chromaffin cells. Nature. 388 [PubMed]

TAKEUCHI A. (1958). The long-lasting depression in neuromuscular transmission of frog. The Japanese journal of physiology. 8 [PubMed]

THIES RE. (1965). NEUROMUSCULAR DEPRESSION AND THE APPARENT DEPLETION OF TRANSMITTER IN MAMMALIAN MUSCLE. J Neurophysiol. 28

Trussell LO, Fischbach GD. (1989). Glutamate receptor desensitization and its role in synaptic transmission. Neuron. 3 [PubMed]

Varela JA et al. (1997). A quantitative description of short-term plasticity at excitatory synapses in layer 2/3 of rat primary visual cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 17 [PubMed]

Vitale ML, Seward EP, Trifaró JM. (1995). Chromaffin cell cortical actin network dynamics control the size of the release-ready vesicle pool and the initial rate of exocytosis. Neuron. 14 [PubMed]

Wang LY, Kaczmarek LK. (1998). High-frequency firing helps replenish the readily releasable pool of synaptic vesicles. Nature. 394 [PubMed]

Weis S, Schneggenburger R, Neher E. (1999). Properties of a model of Ca++-dependent vesicle pool dynamics and short term synaptic depression. Biophysical journal. 77 [PubMed]

Wilson DF. (1977). Estimates of quantal-release and binomial statistical-release parameters at rat neuromuscular junction. The American journal of physiology. 233 [PubMed]

Worden MK, Bykhovskaia M, Hackett JT. (1997). Facilitation at the lobster neuromuscular junction: a stimulus-dependent mobilization model. Journal of neurophysiology. 78 [PubMed]

Wu LG, Betz WJ. (1998). Kinetics of synaptic depression and vesicle recycling after tetanic stimulation of frog motor nerve terminals. Biophysical journal. 74 [PubMed]

Zucker RS, Bruner J. (1977). Long-lasting depression and the depletion hypothesis at crayfish neuromuscular junction J Comp Physiol. 121

von Gersdorff H, Matthews G. (1997). Depletion and replenishment of vesicle pools at a ribbon-type synaptic terminal. The Journal of neuroscience : the official journal of the Society for Neuroscience. 17 [PubMed]

References and models that cite this paper
This website requires cookies and limited processing of your personal data in order to function. By continuing to browse or otherwise use this site, you are agreeing to this use. See our Privacy policy and how to cite and terms of use.