ModelDB: Models that contain BioNet (web link to model)

Simulation Environment: BioNet (web link to model)

Visual physiology of the layer 4 cortical circuit in silico (Arkhipov et al 2018)

https://alleninstitute.github.io/bmtk/bionet.html
"BioNet is a high-level interface to NEURON that facilitates simulations of large-scale networks of multicompartmental neurons. It is built on top of Python, but allows users to run simulations quickly often with little-to-no programming."

Top authors for BioNet (web link to model):

Arkhipov A (1)
Gouwens NW (1)
Billeh YN (1)
Gratiy S (1)
Iyer R (1)
Wei Z (1)
Xu Z (1)
Abbasi-Asl R (1)
Berg J (1)
Buice M (1)

Top concepts studied with BioNet (web link to model):

Simplified Models (1)
Detailed Neuronal Models (1)
Brain Rhythms (1)
Gamma oscillations (1)
Triggered activity (1)
Activity Patterns (1)
Orientation selectivity (1)

Top neurons studied with BioNet (web link to model):

Neocortex V1 interneuron chandelier SOM GABA cell (1)
Neocortex V1 interneuron basket PV GABA cell (1)
Neocortex layer 4 pyramidal cell (1)

Top currents studied with BioNet (web link to model):

I L high threshold (1)
I T low threshold (1)
I M (1)
I Krp (1)
I K (1)
I Na,p (1)
I Na,t (1)
IK Skca (1)

Top references cited by these models:

Douglas RJ, Koch C, Mahowald M, Martin KA, Suarez HH. (1995). Recurrent excitation in neocortical circuits. Science (New York, N.Y.). 269 (1)
Hines ML, Carnevale NT. (1997). The NEURON simulation environment. Neural computation. 9 (1)
Poirazi P, Brannon T, Mel BW. (2003). Pyramidal neuron as two-layer neural network. Neuron. 37 (1)
van Vreeswijk C, Sompolinsky H. (1996). Chaos in neuronal networks with balanced excitatory and inhibitory activity. Science (New York, N.Y.). 274 (1)
Holt GR, Koch C. (1999). Electrical interactions via the extracellular potential near cell bodies. Journal of computational neuroscience. 6 (1)