Amirikian B. (2005). A phenomenological theory of spatially structured local synaptic connectivity. PLoS computational biology. 1 [PubMed]
Arendt T et al. (1997). Plastic neuronal remodeling is impaired in patients with Alzheimer's disease carrying apolipoprotein epsilon 4 allele. The Journal of neuroscience : the official journal of the Society for Neuroscience. 17 [PubMed]
Ascoli GA. (2006). Mobilizing the base of neuroscience data: the case of neuronal morphologies. Nature reviews. Neuroscience. 7 [PubMed]
Barabási AL. (2009). Scale-free networks: a decade and beyond. Science (New York, N.Y.). 325 [PubMed]
Bassett DS, Bullmore E. (2006). Small-world brain networks. The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry. 12 [PubMed]
Benson DL, Colman DR, Huntley GW. (2001). Molecules, maps and synapse specificity. Nature reviews. Neuroscience. 2 [PubMed]
Bettencourt LM, Stephens GJ, Ham MI, Gross GW. (2007). Functional structure of cortical neuronal networks grown in vitro. Physical review. E, Statistical, nonlinear, and soft matter physics. 75 [PubMed]
Bullmore E, Sporns O. (2009). Complex brain networks: graph theoretical analysis of structural and functional systems. Nature reviews. Neuroscience. 10 [PubMed]
Chen W et al. (2011). Clustering predicts memory performance in networks of spiking and non-spiking neurons. Frontiers in computational neuroscience. 5 [PubMed]
Chklovskii DB, Mel BW, Svoboda K. (2004). Cortical rewiring and information storage. Nature. 431 [PubMed]
Cline HT. (2001). Dendritic arbor development and synaptogenesis. Current opinion in neurobiology. 11 [PubMed]
Cook SC, Wellman CL. (2004). Chronic stress alters dendritic morphology in rat medial prefrontal cortex. Journal of neurobiology. 60 [PubMed]
Costa Lda F et al. (2002). A shape analysis framework for neuromorphometry. Network (Bristol, England). 13 [PubMed]
Courchesne E, Redcay E, Morgan JT, Kennedy DP. (2005). Autism at the beginning: microstructural and growth abnormalities underlying the cognitive and behavioral phenotype of autism. Development and psychopathology. 17 [PubMed]
Cullen TJ et al. (2006). Anomalies of asymmetry of pyramidal cell density and structure in dorsolateral prefrontal cortex in schizophrenia. The British journal of psychiatry : the journal of mental science. 188 [PubMed]
Feldmeyer D, Lübke J, Silver RA, Sakmann B. (2002). Synaptic connections between layer 4 spiny neurone-layer 2/3 pyramidal cell pairs in juvenile rat barrel cortex: physiology and anatomy of interlaminar signalling within a cortical column. The Journal of physiology. 538 [PubMed]
Gaiteri C, Rubin JE. (2011). The interaction of intrinsic dynamics and network topology in determining network burst synchrony. Frontiers in computational neuroscience. 5 [PubMed]
Gerhard F, Pipa G, Lima B, Neuenschwander S, Gerstner W. (2011). Extraction of Network Topology From Multi-Electrode Recordings: Is there a Small-World Effect? Frontiers in computational neuroscience. 5 [PubMed]
He Y, Chen ZJ, Evans AC. (2007). Small-world anatomical networks in the human brain revealed by cortical thickness from MRI. Cerebral cortex (New York, N.Y. : 1991). 17 [PubMed]
Hellwig B. (2000). A quantitative analysis of the local connectivity between pyramidal neurons in layers 2/3 of the rat visual cortex. Biological cybernetics. 82 [PubMed]
Hill SL, Wang Y, Riachi I, Schürmann F, Markram H. (2012). Statistical connectivity provides a sufficient foundation for specific functional connectivity in neocortical neural microcircuits. Proceedings of the National Academy of Sciences of the United States of America. 109 [PubMed]
Holmgren C, Harkany T, Svennenfors B, Zilberter Y. (2003). Pyramidal cell communication within local networks in layer 2/3 of rat neocortex. The Journal of physiology. 551 [PubMed]
Isbister CM, O'Connor TP. (1999). Filopodial adhesion does not predict growth cone steering events in vivo. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19 [PubMed]
Kaiser M, Hilgetag CC, van Ooyen A. (2009). A simple rule for axon outgrowth and synaptic competition generates realistic connection lengths and filling fractions. Cerebral cortex (New York, N.Y. : 1991). 19 [PubMed]
Kaufmann WE, Moser HW. (2000). Dendritic anomalies in disorders associated with mental retardation. Cerebral cortex (New York, N.Y. : 1991). 10 [PubMed]
Koene RA et al. (2009). NETMORPH: a framework for the stochastic generation of large scale neuronal networks with realistic neuron morphologies. Neuroinformatics. 7 [PubMed]
Kvajo M et al. (2008). A mutation in mouse Disc1 that models a schizophrenia risk allele leads to specific alterations in neuronal architecture and cognition. Proceedings of the National Academy of Sciences of the United States of America. 105 [PubMed]
Lago-Fernández LF, Huerta R, Corbacho F, Sigüenza JA. (2000). Fast response and temporal coherent oscillations in small-world networks. Physical review letters. 84 [PubMed]
Larkman AU. (1991). Dendritic morphology of pyramidal neurones of the visual cortex of the rat: I. Branching patterns. The Journal of comparative neurology. 306 [PubMed]
Le Bé JV, Silberberg G, Wang Y, Markram H. (2007). Morphological, electrophysiological, and synaptic properties of corticocallosal pyramidal cells in the neonatal rat neocortex. Cerebral cortex (New York, N.Y. : 1991). 17 [PubMed]
Liu Y et al. (2008). Disrupted small-world networks in schizophrenia. Brain : a journal of neurology. 131 [PubMed]
Lohmann H, Rörig B. (1994). Long-range horizontal connections between supragranular pyramidal cells in the extrastriate visual cortex of the rat. The Journal of comparative neurology. 344 [PubMed]
Maass W, Natschläger T, Markram H. (2002). Real-time computing without stable states: a new framework for neural computation based on perturbations. Neural computation. 14 [PubMed]
Magariños AM, McEwen BS, Flügge G, Fuchs E. (1996). Chronic psychosocial stress causes apical dendritic atrophy of hippocampal CA3 pyramidal neurons in subordinate tree shrews. The Journal of neuroscience : the official journal of the Society for Neuroscience. 16 [PubMed]
Magee JC. (2000). Dendritic integration of excitatory synaptic input. Nature reviews. Neuroscience. 1 [PubMed]
Micheloyannis S et al. (2006). Small-world networks and disturbed functional connectivity in schizophrenia. Schizophrenia research. 87 [PubMed]
Moolman DL, Vitolo OV, Vonsattel JP, Shelanski ML. (2004). Dendrite and dendritic spine alterations in Alzheimer models. Journal of neurocytology. 33 [PubMed]
Morelli LG, Abramson G, Kuperman MN. (2004). Associative memory on a small-world neural network Eur Phys J. 38
Neymotin SA, Jacobs KM, Fenton AA, Lytton WW. (2011). Synaptic information transfer in computer models of neocortical columns. Journal of computational neuroscience. 30 [PubMed]
Nuñez JL, Kim BY, Juraska JM. (1998). Neonatal cryoanesthesia affects the morphology of the visual cortex in the adult rat. Brain research. Developmental brain research. 111 [PubMed]
Parnavelas JG, Van Pelt J, Uylings HB, Ruiz-Marcos A. (). Geometrical and topological characteristics in the dendritic development of cortical pyramidal and non-pyramidal neurons. The Self-Organizing Brain: From Growth Cones to Functional Networks (Progress in Brain Research). 102
Perin R, Berger TK, Markram H. (2011). A synaptic organizing principle for cortical neuronal groups. Proceedings of the National Academy of Sciences of the United States of America. 108 [PubMed]
Pernice V, Staude B, Cardanobile S, Rotter S. (2011). How structure determines correlations in neuronal networks. PLoS computational biology. 7 [PubMed]
Polinsky M, Balazovich K, Tosney KW. (2000). Identification of an invariant response: stable contact with schwann cells induces veil extension in sensory growth cones. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20 [PubMed]
Polleux F. (2005). Genetic mechanisms specifying cortical connectivity: let's make some projections together. Neuron. 46 [PubMed]
Radley JJ et al. (2004). Chronic behavioral stress induces apical dendritic reorganization in pyramidal neurons of the medial prefrontal cortex. Neuroscience. 125 [PubMed]
Roxin A. (2011). The role of degree distribution in shaping the dynamics in networks of sparsely connected spiking neurons. Frontiers in computational neuroscience. 5 [PubMed]
Shepherd GM, Svoboda K. (2005). Laminar and columnar organization of ascending excitatory projections to layer 2/3 pyramidal neurons in rat barrel cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]
Song S, Sjöström PJ, Reigl M, Nelson S, Chklovskii DB. (2005). Highly nonrandom features of synaptic connectivity in local cortical circuits. PLoS biology. 3 [PubMed]
Sousa N, Lukoyanov NV, Madeira MD, Almeida OF, Paula-Barbosa MM. (2000). Reorganization of the morphology of hippocampal neurites and synapses after stress-induced damage correlates with behavioral improvement. Neuroscience. 97 [PubMed]
Sporns O, Chialvo DR, Kaiser M, Hilgetag CC. (2004). Organization, development and function of complex brain networks. Trends in cognitive sciences. 8 [PubMed]
Sporns O, Tononi G, Edelman GM. (2000). Theoretical neuroanatomy: relating anatomical and functional connectivity in graphs and cortical connection matrices. Cerebral cortex (New York, N.Y. : 1991). 10 [PubMed]
Sporns O, Zwi JD. (2004). The small world of the cerebral cortex. Neuroinformatics. 2 [PubMed]
Stam CJ, Reijneveld JC. (2007). Graph theoretical analysis of complex networks in the brain. Nonlinear biomedical physics. 1 [PubMed]
Stepanyants A, Chklovskii DB. (2005). Neurogeometry and potential synaptic connectivity. Trends in neurosciences. 28 [PubMed]
Stepanyants A, Tamás G, Chklovskii DB. (2004). Class-specific features of neuronal wiring. Neuron. 43 [PubMed]
Supekar K, Menon V, Rubin D, Musen M, Greicius MD. (2008). Network analysis of intrinsic functional brain connectivity in Alzheimer's disease. PLoS computational biology. 4 [PubMed]
Takahashi N, Sasaki T, Matsumoto W, Matsuki N, Ikegaya Y. (2010). Circuit topology for synchronizing neurons in spontaneously active networks. Proceedings of the National Academy of Sciences of the United States of America. 107 [PubMed]
Tessier-Lavigne M. (1994). Axon guidance by diffusible repellants and attractants. Current opinion in genetics & development. 4 [PubMed]
Tigerholm J, Migliore M, Fransén E. (2013). Integration of synchronous synaptic input in CA1 pyramidal neuron depends on spatial and temporal distributions of the input. Hippocampus. 23 [PubMed]
Van Pelt J, Van Ooyen A, Uylings HB. (2001). Modeling dendritic geometry and the development of nerve connections. Computational Neuroscience, Realistic Modeling for Experimentalists.
Voges N, Perrinet L. (2012). Complex dynamics in recurrent cortical networks based on spatially realistic connectivities. Frontiers in computational neuroscience. 6 [PubMed]
Watts DJ, Strogatz SH. (1998). Collective dynamics of 'small-world' networks. Nature. 393 [PubMed]
Yamada M, Wada Y, Tsukagoshi H, Otomo E, Hayakawa M. (1988). A quantitative Golgi study of basal dendrites of hippocampal CA1 pyramidal cells in senile dementia of Alzheimer type. Journal of neurology, neurosurgery, and psychiatry. 51 [PubMed]
Yu S, Huang D, Singer W, Nikolic D. (2008). A small world of neuronal synchrony. Cerebral cortex (New York, N.Y. : 1991). 18 [PubMed]
da Silva S, Wang F. (2011). Retrograde neural circuit specification by target-derived neurotrophins and growth factors. Current opinion in neurobiology. 21 [PubMed]
van Pelt J, Carnell A, de Ridder S, Mansvelder HD, van Ooyen A. (2010). An algorithm for finding candidate synaptic sites in computer generated networks of neurons with realistic morphologies. Frontiers in computational neuroscience. 4 [PubMed]
van Pelt J, van Ooyen A, Uylings HB. (2001). The need for integrating neuronal morphology databases and computational environments in exploring neuronal structure and function. Anatomy and embryology. 204 [PubMed]
van den Heuvel MP, Sporns O. (2011). Rich-club organization of the human connectome. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31 [PubMed]
Reimann MW, King JG, Muller EB, Ramaswamy S, Markram H. (2015). An algorithm to predict the connectome of neural microcircuits. Frontiers in computational neuroscience. 9 [PubMed]