Anderson WD, Galván EJ, Mauna JC, Thiels E, Barrionuevo G. (2011). Properties and functional implications of I (h) in hippocampal area CA3 interneurons. Pflugers Archiv : European journal of physiology. 462 [PubMed]

• CA3 Radiatum/Lacunosum-Moleculare interneuron, Ih (Anderson et al. 2011) [Model]

Ariav G, Polsky A, Schiller J. (2003). Submillisecond precision of the input-output transformation function mediated by fast sodium dendritic spikes in basal dendrites of CA1 pyramidal neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Azouz R. (2005). Dynamic spatiotemporal synaptic integration in cortical neurons: neuronal gain, revisited. Journal of neurophysiology. 94 [PubMed]

Barkai O, Butterman R, Katz B, Lev S, Binshtok AM. (2020). The Input-Output Relation of Primary Nociceptive Neurons is Determined by the Morphology of the Peripheral Nociceptive Terminals. The Journal of neuroscience : the official journal of the Society for Neuroscience. 40 [PubMed]

• A model for a nociceptor terminal and terminal tree (Barkai et al., 2020) [Model]

Branco T, Clark BA, Häusser M. (2010). Dendritic discrimination of temporal input sequences in cortical neurons. Science (New York, N.Y.). 329 [PubMed]

• Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010) [Model]

Branco T, Häusser M. (2011). Synaptic integration gradients in single cortical pyramidal cell dendrites. Neuron. 69 [PubMed]

• Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010) [Model]

Bui TV, Cushing S, Dewey D, Fyffe RE, Rose PK. (2003). Comparison of the morphological and electrotonic properties of Renshaw cells, Ia inhibitory interneurons, and motoneurons in the cat. Journal of neurophysiology. 90 [PubMed]

Carlson BA, Kawasaki M. (2006). Stimulus selectivity is enhanced by voltage-dependent conductances in combination-sensitive neurons. Journal of neurophysiology. 96 [PubMed]

• Combination sensitivity and active conductances (Carlson and Kawasaki 2006) [Model]

Chen X, Shu S, Kennedy DP, Willcox SC, Bayliss DA. (2009). Subunit-specific effects of isoflurane on neuronal Ih in HCN1 knockout mice. Journal of neurophysiology. 101 [PubMed]

Coskren PJ et al. (2015). Functional consequences of age-related morphologic changes to pyramidal neurons of the rhesus monkey prefrontal cortex. Journal of computational neuroscience. 38 [PubMed]

• Rhesus Monkey Layer 3 Pyramidal Neurons: Young vs aged PFC (Coskren et al. 2015) [Model]

Day M et al. (2005). Dendritic excitability of mouse frontal cortex pyramidal neurons is shaped by the interaction among HCN, Kir2, and Kleak channels. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Galati DF, Hiester BG, Jones KR. (2016). Computer Simulations Support a Morphological Contribution to BDNF Enhancement of Action Potential Generation. Frontiers in cellular neuroscience. 10 [PubMed]

• BDNF morphological contributions to AP enhancement (Galati et al. 2016) [Model]

Guet-McCreight A, Camiré O, Topolnik L, Skinner FK. (2016). Using a Semi-Automated Strategy to Develop Multi-Compartment Models That Predict Biophysical Properties of Interneuron-Specific 3 (IS3) Cells in Hippocampus. eNeuro. 3 [PubMed]

• Interneuron Specific 3 Interneuron Model (Guet-McCreight et al, 2016) [Model]

Heck D, Borst A, Antkowiak B. (2003). Passive spatial and temporal integration of excitatory synaptic inputs in cerebellar Purkinje cells of young rats. Neuroscience letters. 341 [PubMed]

Kim H. (2020). Linking Motoneuron PIC Location to Motor Function in Closed-Loop Motor Unit System Including Afferent Feedback: A Computational Investigation. eNeuro. 7 [PubMed]

• A model of closed-loop motor unit including muscle spindle feedback (Kim, 2020) [Model]

Kubota Y et al. (2015). Functional effects of distinct innervation styles of pyramidal cells by fast spiking cortical interneurons. eLife. 4 [PubMed]

• A Layer V CCS type pyramidal cell, inhibitory synapse current conduction (Kubota Y et al., 2015) [Model]

London M, Segev I. (2001). Synaptic scaling in vitro and in vivo. Nature neuroscience. 4 [PubMed]

• CA1 Pyramidal Neuron: Synaptic Scaling (London, Segev 2001) [Model]

Magee JC, Cook EP. (2001). Synaptic scaling in vitro and in vivo - Reply Nature Neuroscience. 4

Menon V et al. (2013). Balanced synaptic impact via distance-dependent synapse distribution and complementary expression of AMPARs and NMDARs in hippocampal dendrites. Neuron. 80 [PubMed]

• Distance-dependent synaptic strength in CA1 pyramidal neurons (Menon et al. 2013) [Model]

Migliore M, De Simone G, Migliore R. (2015). Effect of the initial synaptic state on the probability to induce long-term potentiation and depression. Biophysical journal. 108 [PubMed]

• Effect of the initial synaptic state on the probability to induce LTP and LTD (Migliore et al. 2015) [Model]

Mukunda CL, Narayanan R. (2017). Degeneracy in the regulation of short-term plasticity and synaptic filtering by presynaptic mechanisms. The Journal of physiology. 595 [PubMed]

• Conductance based model for short term plasticity at CA3-CA1 synapses (Mukunda & Narayanan 2017) [Model]

Ness TV, Remme MW, Einevoll GT. (2016). Active subthreshold dendritic conductances shape the local field potential. The Journal of physiology. 594 [PubMed]

Poirazi P, Brannon T, Mel BW. (2003). Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell. Neuron. 37 [PubMed]

• CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Poleg-Polsky A. (2019). Dendritic spikes expand the range of well-tolerated population noise structures. The Journal of neuroscience : the official journal of the Society for Neuroscience. 39 [PubMed]

• Distinct integration properties of noisy inputs in active dendritic subunits (Poleg-Polsky 2019) [Model]

Polsky A, Mel BW, Schiller J. (2004). Computational subunits in thin dendrites of pyramidal cells. Nature neuroscience. 7 [PubMed]

• CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Prescott SA, De Koninck Y. (2005). Integration time in a subset of spinal lamina I neurons is lengthened by sodium and calcium currents acting synergistically to prolong subthreshold depolarization. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

• Tonic neuron in spinal lamina I: prolongation of subthreshold depol. (Prescott and De Koninck 2005) [Model]

Rindner DJ, Proddutur A, Lur G. (2022). Cell-type specific integration of feedforward and feedback synaptic inputs in the posterior parietal cortex Neuron. 110 [PubMed]

• Cell-type specific integration of feedforward and feedback synaptic inputs (Ridner et al, 2022) [Model]

Rudolph M, Destexhe A. (2003). Tuning neocortical pyramidal neurons between integrators and coincidence detectors. Journal of computational neuroscience. 14 [PubMed]

Rudolph M, Destexhe A. (2003). A fast-conducting, stochastic integrative mode for neocortical neurons in vivo. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Santhakumar V, Aradi I, Soltesz I. (2005). Role of mossy fiber sprouting and mossy cell loss in hyperexcitability: a network model of the dentate gyrus incorporating cell types and axonal topography. Journal of neurophysiology. 93 [PubMed]

• Dentate gyrus network model (Santhakumar et al 2005) [Model]
• Dentate gyrus (Morgan et al. 2007, 2008, Santhakumar et al. 2005, Dyhrfjeld-Johnsen et al. 2007) [Model]

Schmidt-Hieber C et al. (2017). Active dendritic integration as a mechanism for robust and precise grid cell firing. Nature neuroscience. 20 [PubMed]

• Active dendritic integration in robust and precise grid cell firing (Schmidt-Hieber et al 2017) [Model]

Shah MM, Migliore M, Brown DA. (2011). Differential effects of Kv7 (M-) channels on synaptic integration in distinct subcellular compartments of rat hippocampal pyramidal neurons. The Journal of physiology. 589 [PubMed]

• CA1 pyramidal neurons: effects of Kv7 (M-) channels on synaptic integration (Shah et al. 2011) [Model]

Shpigelman L, Singer Y, Paz R, Vaadia E. (2005). Spikernels: predicting arm movements by embedding population spike rate patterns in inner-product spaces. Neural computation. 17 [PubMed]

Sinha M, Narayanan R. (2015). HCN channels enhance spike phase coherence and regulate the phase of spikes and LFPs in the theta-frequency range. Proceedings of the National Academy of Sciences of the United States of America. 112 [PubMed]

• Subthreshold conductances regulate theta-frequency LFPs and spike phase (Sinha and Narayanan, 2015) [Model]

Ujfalussy BB, Makara JK, Lengyel M, Branco T. (2018). Global and Multiplexed Dendritic Computations under In Vivo-like Conditions. Neuron. 100 [PubMed]

• Global and multiplexed dendritic computations under in vivo-like conditions (Ujfalussy et al 2018) [Model]

Williams SR, Stuart GJ. (2002). Dependence of EPSP efficacy on synapse location in neocortical pyramidal neurons. Science (New York, N.Y.). 295 [PubMed]

Williams SR, Stuart GJ. (2003). Role of dendritic synapse location in the control of action potential output. Trends in neurosciences. 26 [PubMed]

Williams SR, Stuart GJ. (2003). Voltage- and site-dependent control of the somatic impact of dendritic IPSPs. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

van Ooyen A et al. (2014). Independently outgrowing neurons and geometry-based synapse formation produce networks with realistic synaptic connectivity. PloS one. 9 [PubMed]

• NETMORPH: creates NNs with realistic neuron morphologies (Koene et al. 2009, van Ooyen et al. 2014) [Model]