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• Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017) [Model]

Destexhe A, Sejnowski TJ. (2003). Interactions between membrane conductances underlying thalamocortical slow-wave oscillations. Physiological reviews. 83 [PubMed]

Ebner C, Clopath C, Jedlicka P, Cuntz H. (2019). Unifying Long-Term Plasticity Rules for Excitatory Synapses by Modeling Dendrites of Cortical Pyramidal Neurons. Cell reports. 29 [PubMed]

• Four-pathway phenomenological synaptic plasticity model (Ebner et al. 2019) [Model]

Graupner M, Brunel N. (2007). STDP in a bistable synapse model based on CaMKII and associated signaling pathways. PLoS computational biology. 3 [PubMed]

• CaMKII system exhibiting bistability with respect to calcium (Graupner and Brunel 2007) [Model]

Holmes WR. (2000). Models of calmodulin trapping and CaM kinase II activation in a dendritic spine. Journal of computational neuroscience. 8 [PubMed]

Kim M, Huang T, Abel T, Blackwell KT. (2010). Temporal sensitivity of protein kinase a activation in late-phase long term potentiation. PLoS computational biology. 6 [PubMed]

• Hippocampus CA1: Temporal sensitivity of signaling pathways underlying LTP (Kim et al. 2010) [Model]

Kim M et al. (2011). Colocalization of protein kinase A with adenylyl cyclase enhances protein kinase A activity during induction of long-lasting long-term-potentiation. PLoS computational biology. 7 [PubMed]

• Hippocampus CA1: Simulations of LTP signaling pathways (Kim M et al. 2011) [Model]

Kubota Y, Bower JM. (2001). Transient versus asymptotic dynamics of CaM kinase II: possible roles of phosphatase. Journal of computational neuroscience. 11 [PubMed]

Miningou Zobon NT, Jędrzejewska-Szmek J, Blackwell KT. (2021). Temporal pattern and synergy influence activity of ERK signaling pathways during L-LTP induction eLife. 10 [PubMed]

• Dynamics of ERK signaling pathways during L-LTP induction(Miningou et al 2021) [Model]

Oliveira RF, Kim M, Blackwell KT. (2012). Subcellular location of PKA controls striatal plasticity: stochastic simulations in spiny dendrites. PLoS computational biology. 8 [PubMed]

• Dopamine activation of signaling pathways in a medium spiny projection neuron (Oliveira et al. 2012) [Model]

Sejnowski TJ, Destexhe A. (2000). Why do we sleep? Brain research. 886 [PubMed]

Siu D. (2004). Activity-dependent hepatocyte growth factor expression and its role in organogenesis and cancer growth suppression. Medical hypotheses. 63 [PubMed]

Teramae JN, Fukai T. (2005). A Cellular Mechanism for Graded Persistent Activity in a Model Neuron and Its Implications in Working Memory Journal of computational neuroscience. 18 [PubMed]

Wörgötter F, Porr B. (2005). Temporal sequence learning, prediction, and control: a review of different models and their relation to biological mechanisms. Neural computation. 17 [PubMed]

Zamora Chimal CG, De Schutter E. (2018). Ca2+ Requirements for Long-Term Depression Are Frequency Sensitive in Purkinje Cells. Frontiers in molecular neuroscience. 11 [PubMed]

• Ca2+ requirements for Long-Term Depression in Purkinje Cells (Criseida Zamora et al 2018) [Model]