Bono J, Clopath C. (2017). Modeling somatic and dendritic spike mediated plasticity at the single neuron and network level. Nature communications. 8 [PubMed]

• Modeling dendritic spikes and plasticity (Bono and Clopath 2017) [Model]

Clopath C, Büsing L, Vasilaki E, Gerstner W. (2010). Connectivity reflects coding: a model of voltage-based STDP with homeostasis. Nature neuroscience. 13 [PubMed]

• Voltage-based STDP synapse (Clopath et al. 2010) [Model]

D'Albis T, Kempter R. (2017). A single-cell spiking model for the origin of grid-cell patterns. PLoS computational biology. 13 [PubMed]

• A single-cell spiking model for the origin of grid-cell patterns (D'Albis & Kempter 2017) [Model]

Florian RV. (2007). Reinforcement learning through modulation of spike-timing-dependent synaptic plasticity. Neural computation. 19 [PubMed]

Gulledge AT, Carnevale NT, Stuart GJ. (2012). Electrical advantages of dendritic spines. PloS one. 7 [PubMed]

Günay C et al. (2015). Distal spike initiation zone location estimation by morphological simulation of ionic current filtering demonstrated in a novel model of an identified Drosophila motoneuron. PLoS computational biology. 11 [PubMed]

• Drosophila 3rd instar larval aCC motoneuron (Gunay et al. 2015) [Model]

Howard AL, Neu A, Morgan RJ, Echegoyen JC, Soltesz I. (2007). Opposing modifications in intrinsic currents and synaptic inputs in post-traumatic mossy cells: evidence for single-cell homeostasis in a hyperexcitable network. Journal of neurophysiology. 97 [PubMed]

Huang CH, Huang YT, Chen CC, Chan CK. (2017). Propagation and synchronization of reverberatory bursts in developing cultured networks. Journal of computational neuroscience. 42 [PubMed]

• Reverberatory bursts propagation and synchronization in developing cultured NNs (Huang et al 2016) [Model]

Lagier S et al. (2007). GABAergic inhibition at dendrodendritic synapses tunes gamma oscillations in the olfactory bulb. Proceedings of the National Academy of Sciences of the United States of America. 104 [PubMed]

• Olfactory bulb network model of gamma oscillations (Bathellier et al. 2006; Lagier et al. 2007) [Model]

Lepora NF, Overton PG, Gurney K. (2012). Efficient fitting of conductance-based model neurons from somatic current clamp. Journal of computational neuroscience. 32 [PubMed]

• Parameter estimation for Hodgkin-Huxley based models of cortical neurons (Lepora et al. 2011) [Model]

Lezmy J et al. (2017). M-current inhibition rapidly induces a unique CK2-dependent plasticity of the axon initial segment. Proceedings of the National Academy of Sciences of the United States of America. 114 [PubMed]

Mohapatra DP et al. (2009). Regulation of intrinsic excitability in hippocampal neurons by activity-dependent modulation of the KV2.1 potassium channel. Channels (Austin, Tex.). 3 [PubMed]

Mulcahy G, Atwood B, Kuznetsov A. (2020). Basal ganglia role in learning rewarded actions and executing previously learned choices: Healthy and diseased states. PloS one. 15 [PubMed]

• Cortico - Basal Ganglia Loop (Mulcahy et al 2020) [Model]

Muresan RC, Savin C. (2007). Resonance or integration? Self-sustained dynamics and excitability of neural microcircuits. Journal of neurophysiology. 97 [PubMed]

Mäki-Marttunen T et al. (2019). Alterations in Schizophrenia-Associated Genes Can Lead to Increased Power in Delta Oscillations. Cerebral cortex (New York, N.Y. : 1991). 29 [PubMed]

• SCZ-associated variant effects on L5 pyr cell NN activity and delta osc. (Maki-Marttunen et al 2018) [Model]

Nanda S, Das R, Bhattacharjee S, Cox DN, Ascoli GA. (2018). Morphological determinants of dendritic arborization neurons in Drosophila larva. Brain structure & function. 223 [PubMed]

• Morphological determinants of dendritic arborization neurons in Drosophila larva (Nanda et al 2018) [Model]

Narayanan R, Johnston D. (2010). The h current is a candidate mechanism for regulating the sliding modification threshold in a BCM-like synaptic learning rule. Journal of neurophysiology. 104 [PubMed]

• BCM-like synaptic plasticity with conductance-based models (Narayanan Johnston, 2010) [Model]

Peron SP, Krapp HG, Gabbiani F. (2007). Influence of electrotonic structure and synaptic mapping on the receptive field properties of a collision-detecting neuron. Journal of neurophysiology. 97 [PubMed]

Rabinowitch I, Segev I. (2006). The interplay between homeostatic synaptic plasticity and functional dendritic compartments. Journal of neurophysiology. 96 [PubMed]

• Homeostatic synaptic plasticity (Rabinowitch and Segev 2006a,b) [Model]

Rabinowitch I, Segev I. (2006). The endurance and selectivity of spatial patterns of long-term potentiation/depression in dendrites under homeostatic synaptic plasticity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26 [PubMed]

• Homeostatic synaptic plasticity (Rabinowitch and Segev 2006a,b) [Model]

Rabinowitch I, Segev I. (2008). Two opposing plasticity mechanisms pulling a single synapse. Trends in neurosciences. 31 [PubMed]

• Homeostatic synaptic plasticity (Rabinowitch and Segev 2006a,b) [Model]

Reimann MW, Horlemann AL, Ramaswamy S, Muller EB, Markram H. (2017). Morphological Diversity Strongly Constrains Synaptic Connectivity and Plasticity. Cerebral cortex (New York, N.Y. : 1991). 27 [PubMed]

• The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]

Sadeh S, Clopath C, Rotter S. (2015). Emergence of Functional Specificity in Balanced Networks with Synaptic Plasticity. PLoS computational biology. 11 [PubMed]

• Functional balanced networks with synaptic plasticity (Sadeh et al, 2015) [Model]

Saghatelyan A et al. (2005). Activity-dependent adjustments of the inhibitory network in the olfactory bulb following early postnatal deprivation. Neuron. 46 [PubMed]

• Olfactory bulb granule cell: effects of odor deprivation (Saghatelyan et al 2005) [Model]

Stevens JL, Law JS, Antolík J, Bednar JA. (2013). Mechanisms for stable, robust, and adaptive development of orientation maps in the primary visual cortex. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

• Mechanisms for stable, robust, and adaptive development of orientation maps (Stevens et al. 2013) [Model]

Sussillo D, Toyoizumi T, Maass W. (2007). Self-tuning of neural circuits through short-term synaptic plasticity. Journal of neurophysiology. 97 [PubMed]

Tetzlaff C, Okujeni S, Egert U, Wörgötter F, Butz M. (2010). Self-organized criticality in developing neuronal networks. PLoS computational biology. 6 [PubMed]

Toyoizumi T, Pfister JP, Aihara K, Gerstner W. (2007). Optimality model of unsupervised spike-timing-dependent plasticity: synaptic memory and weight distribution. Neural computation. 19 [PubMed]

Triesch J. (2007). Synergies between intrinsic and synaptic plasticity mechanisms. Neural computation. 19 [PubMed]