Ausborn J et al. (2018). Organization of the core respiratory network: Insights from optogenetic and modeling studies. PLoS computational biology. 14 [PubMed]

See more from authors: Ausborn J · Koizumi H · Barnett WH · John TT · Zhang R · Molkov YI · Smith JC · Rybak IA

References and models cited by this paper

Anderson TM et al. (2016). A novel excitatory network for the control of breathing. Nature. 536 [PubMed]

Baekey DM, Molkov YI, Paton JF, Rybak IA, Dick TE. (2010). Effect of baroreceptor stimulation on the respiratory pattern: insights into respiratory-sympathetic interactions. Respiratory physiology & neurobiology. 174 [PubMed]

Berndt A et al. (2011). High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels. Proceedings of the National Academy of Sciences of the United States of America. 108 [PubMed]

Bianchi AL, Denavit-Saubié M, Champagnat J. (1995). Central control of breathing in mammals: neuronal circuitry, membrane properties, and neurotransmitters. Physiological reviews. 75 [PubMed]

Butera RJ, Rinzel J, Smith JC. (1999). Models of respiratory rhythm generation in the pre-Bötzinger complex. I. Bursting pacemaker neurons. Journal of neurophysiology. 82 [PubMed]

Chaudhry FA et al. (1998). The vesicular GABA transporter, VGAT, localizes to synaptic vesicles in sets of glycinergic as well as GABAergic neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience. 18 [PubMed]

Cohen MI. (1979). Neurogenesis of respiratory rhythm in the mammal. Physiological reviews. 59 [PubMed]

Del Negro CA et al. (2005). Sodium and calcium current-mediated pacemaker neurons and respiratory rhythm generation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 25 [PubMed]

Dutschmann M, Dick TE. (2012). Pontine mechanisms of respiratory control. Comprehensive Physiology. 2 [PubMed]

Ezure K. (1990). Synaptic connections between medullary respiratory neurons and considerations on the genesis of respiratory rhythm. Progress in neurobiology. 35 [PubMed]

Ezure K, Tanaka I, Kondo M. (2003). Glycine is used as a transmitter by decrementing expiratory neurons of the ventrolateral medulla in the rat. The Journal of neuroscience : the official journal of the Society for Neuroscience. 23 [PubMed]

Feldman JL, Del Negro CA. (2006). Looking for inspiration: new perspectives on respiratory rhythm. Nature reviews. Neuroscience. 7 [PubMed]

Harris KD et al. (2017). Different roles for inhibition in the rhythm-generating respiratory network. Journal of neurophysiology. 118 [PubMed]

Janczewski WA, Feldman JL. (2006). Distinct rhythm generators for inspiration and expiration in the juvenile rat. The Journal of physiology. 570 [PubMed]

Janczewski WA, Tashima A, Hsu P, Cui Y, Feldman JL. (2013). Role of inhibition in respiratory pattern generation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

Jasinski PE, Molkov YI, Shevtsova NA, Smith JC, Rybak IA. (2013). Sodium and calcium mechanisms of rhythmic bursting in excitatory neural networks of the pre-Bötzinger complex: a computational modelling study. The European journal of neuroscience. 37 [PubMed]

Jiang C, Lipski J. (1990). Extensive monosynaptic inhibition of ventral respiratory group neurons by augmenting neurons in the Bötzinger complex in the cat. Experimental brain research. 81 [PubMed]

Koizumi H et al. (2013). Structural-functional properties of identified excitatory and inhibitory interneurons within pre-Botzinger complex respiratory microcircuits. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33 [PubMed]

Koizumi H et al. (2016). Voltage-Dependent Rhythmogenic Property of Respiratory Pre-Bötzinger Complex Glutamatergic, Dbx1-Derived, and Somatostatin-Expressing Neuron Populations Revealed by Graded Optogenetic Inhibition. eNeuro. 3 [PubMed]

Koizumi H, Smith JC. (2008). Persistent Na+ and K+-dominated leak currents contribute to respiratory rhythm generation in the pre-Bötzinger complex in vitro. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Koizumi H et al. (2008). Functional imaging, spatial reconstruction, and biophysical analysis of a respiratory motor circuit isolated in vitro. The Journal of neuroscience : the official journal of the Society for Neuroscience. 28 [PubMed]

Koshiya N, Smith JC. (1999). Neuronal pacemaker for breathing visualized in vitro. Nature. 400 [PubMed]

Kuwana S et al. (2006). Electrophysiological and morphological characteristics of GABAergic respiratory neurons in the mouse pre-Bötzinger complex. The European journal of neuroscience. 23 [PubMed]

Lin JY. (2011). A user's guide to channelrhodopsin variants: features, limitations and future developments. Experimental physiology. 96 [PubMed]

Lindsey BG, Rybak IA, Smith JC. (2012). Computational models and emergent properties of respiratory neural networks. Comprehensive Physiology. 2 [PubMed]

Lindsey BG, Segers LS, Shannon R. (1987). Functional associations among simultaneously monitored lateral medullary respiratory neurons in the cat. II. Evidence for inhibitory actions of expiratory neurons. Journal of neurophysiology. 57 [PubMed]

Marchenko V et al. (2016). Perturbations of Respiratory Rhythm and Pattern by Disrupting Synaptic Inhibition within Pre-Bötzinger and Bötzinger Complexes. eNeuro. 3 [PubMed]

Molkov YI et al. (2010). Late-expiratory activity: emergence and interactions with the respiratory CpG. Journal of neurophysiology. 104 [PubMed]

Molkov YI, Bacak BJ, Dick TE, Rybak IA. (2013). Control of breathing by interacting pontine and pulmonary feedback loops. Frontiers in neural circuits. 7 [PubMed]

Molkov YI, Rubin JE, Rybak IA, Smith JC. (2017). Computational models of the neural control of breathing. Wiley interdisciplinary reviews. Systems biology and medicine. 9 [PubMed]

Molkov YI et al. (2014). A closed-loop model of the respiratory system: focus on hypercapnia and active expiration. PloS one. 9 [PubMed]

Morgado-Valle C, Baca SM, Feldman JL. (2010). Glycinergic pacemaker neurons in preBötzinger complex of neonatal mouse. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30 [PubMed]

Paton JF. (1996). A working heart-brainstem preparation of the mouse. Journal of neuroscience methods. 65 [PubMed]

Paton JF, Abdala AP, Koizumi H, Smith JC, St-John WM. (2006). Respiratory rhythm generation during gasping depends on persistent sodium current. Nature neuroscience. 9 [PubMed]

Peña F, Parkis MA, Tryba AK, Ramirez JM. (2004). Differential contribution of pacemaker properties to the generation of respiratory rhythms during normoxia and hypoxia. Neuron. 43 [PubMed]

Poon CS, Song G. (2014). Bidirectional plasticity of pontine pneumotaxic postinspiratory drive: implication for a pontomedullary respiratory central pattern generator. Progress in brain research. 209 [PubMed]

Ramirez JM, Dashevskiy T, Marlin IA, Baertsch N. (2016). Microcircuits in respiratory rhythm generation: commonalities with other rhythm generating networks and evolutionary perspectives. Current opinion in neurobiology. 41 [PubMed]

Ramirez JM, Tryba AK, Peña F. (2004). Pacemaker neurons and neuronal networks: an integrative view. Current opinion in neurobiology. 14 [PubMed]

Richter DW, Smith JC. (2014). Respiratory rhythm generation in vivo. Physiology (Bethesda, Md.). 29 [PubMed]

Rubin JE et al. (2011). Interacting oscillations in neural control of breathing: modeling and qualitative analysis. Journal of computational neuroscience. 30 [PubMed]

Rubin JE, Shevtsova NA, Ermentrout GB, Smith JC, Rybak IA. (2009). Multiple rhythmic states in a model of the respiratory central pattern generator. Journal of neurophysiology. 101 [PubMed]

Rybak IA, Abdala AP, Markin SN, Paton JF, Smith JC. (2007). Spatial organization and state-dependent mechanisms for respiratory rhythm and pattern generation. Progress in brain research. 165 [PubMed]

Rybak IA, Molkov YI, Jasinski PE, Shevtsova NA, Smith JC. (2014). Rhythmic bursting in the pre-Bötzinger complex: mechanisms and models. Progress in brain research. 209 [PubMed]

Rybak IA et al. (2008). Reconfiguration of the pontomedullary respiratory network: a computational modeling study with coordinated in vivo experiments. Journal of neurophysiology. 100 [PubMed]

Rybak IA, Paton JF, Schwaber JS. (1997). Modeling neural mechanisms for genesis of respiratory rhythm and pattern. II. Network models of the central respiratory pattern generator. Journal of neurophysiology. 77 [PubMed]

Rybak IA, Ptak K, Shevtsova NA, McCrimmon DR. (2003). Sodium currents in neurons from the rostroventrolateral medulla of the rat. Journal of neurophysiology. 90 [PubMed]

Rybak IA et al. (2004). Modeling the ponto-medullary respiratory network. Respiratory physiology & neurobiology. 143 [PubMed]

Schwarzacher SW, Smith JC, Richter DW. (1995). Pre-Bötzinger complex in the cat. Journal of neurophysiology. 73 [PubMed]

Sherman D, Worrell JW, Cui Y, Feldman JL. (2015). Optogenetic perturbation of preBötzinger complex inhibitory neurons modulates respiratory pattern. Nature neuroscience. 18 [PubMed]

Smith JC, Abdala AP, Borgmann A, Rybak IA, Paton JF. (2013). Brainstem respiratory networks: building blocks and microcircuits. Trends in neurosciences. 36 [PubMed]

Smith JC, Abdala AP, Koizumi H, Rybak IA, Paton JF. (2007). Spatial and functional architecture of the mammalian brain stem respiratory network: a hierarchy of three oscillatory mechanisms. Journal of neurophysiology. 98 [PubMed]

Smith JC, Ellenberger HH, Ballanyi K, Richter DW, Feldman JL. (1991). Pre-Bötzinger complex: a brainstem region that may generate respiratory rhythm in mammals. Science (New York, N.Y.). 254 [PubMed]

Song G, Tin C, Poon CS. (2015). Multiscale fingerprinting of neuronal functional connectivity. Brain structure & function. 220 [PubMed]

Tamamaki N et al. (2003). Green fluorescent protein expression and colocalization with calretinin, parvalbumin, and somatostatin in the GAD67-GFP knock-in mouse. The Journal of comparative neurology. 467 [PubMed]

Thoby-Brisson M, Ramirez JM. (2001). Identification of two types of inspiratory pacemaker neurons in the isolated respiratory neural network of mice. Journal of neurophysiology. 86 [PubMed]

Tian GF, Peever JH, Duffin J. (1999). Bötzinger-complex, bulbospinal expiratory neurones monosynaptically inhibit ventral-group respiratory neurones in the decerebrate rat. Experimental brain research. 124 [PubMed]

Vong L et al. (2011). Leptin action on GABAergic neurons prevents obesity and reduces inhibitory tone to POMC neurons. Neuron. 71 [PubMed]

Winter SM et al. (2009). Glycinergic interneurons are functionally integrated into the inspiratory network of mouse medullary slices. Pflugers Archiv : European journal of physiology. 458 [PubMed]

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